| Gene Symbol | Hccs |
| Entrez Gene ID | 317444 |
| Full Name | holocytochrome c synthase |
| Synonyms | RGD1563855 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Rattus norvegicus(Norway rat) |
| Genome |
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Hccs cDNA ORF clone, Rattus norvegicus(Norway rat)
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Gene
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Clones
gRNAs
The following Hccs gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Hccs cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ORa07511 Clone ID Related Accession (Same CDS sequence) XM_006256834.2 , NM_001191732.1 Accession Version NM_001191732.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 825bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1527696000000 Organism Rattus norvegicus(Norway rat) Product holocytochrome c synthase Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07037644.1. On Jul 17, 2010 this sequence version replaced XM_228867.5. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGGGCTCCT CAGCATCTTC TCCTGCTACT GCAGTAAACA CCTCAAATGC TTCAGATCAT
CAGCCAGCTT CAGCTTCACC CCCTTCAGGA TGTCCAATGC ATGAAGGGCA AAGGAAAGGC
TGTCCAGTGA CTGCAGCAGC ATCTGACCTG ACCAGTGAGA GCAAAGCACA CTCTGTACCT
GCCCACCAAG ACCGGGCCTA TGAGTATGTG GAGTGCCCTG TGACCGGTGC TGCAGCCAAG
AATAAGGAGA ACCTCGATCC TTCAAACCTG ATGCCACCAC CTAATCAGAC ACCGTCCCCT
GATCAGCCAT TTGCTTTGTC TACCTCAAGA GAGGAGTCAT CAATTCCAAG AGCAGACTCT
GAGAAAAAGT GGGTTTACCC ATCTGAACAG ATGTTCTGGA ATGCCATGTT ACGGAAAGGG
TGGAAGTGGA AAGATGATGA TATTAGTCAG AAAGATATGT ATAATATCAT TAGAATTCAC
AATCAGAATA ATGAGCAAGC TTGGAAGGAG ATTTTGAAGT GGGAAGCTCT TCATGCTCAT
GAGTGTCCTT GTGGCCCATC ATTGGTCCGA TTTGGAGGCA AAGCAAGAGA GTATTCACCA
AGGGCAAGAA TTCGTTCCTG GATGGGGTAT GAATTACCTT TTGACCGCCA TGACTGGATC
ATCAATCGTT GTGGCACAGA AGTTAGGTAT GTGATTGATT ACTATGATGG CGGTGAGGTC
AACAAGGACT ACCAGTTCAC TATCCTGGAT GTGCGTCCGG CCTTTGACTC ATTCTCAGCA
GTATGGGACA GAATGAAAGT TGCTTGGTGG CGCTGGACTT CGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001178661.1 CDS 250..1074 Translation 
Target ORF information:
RefSeq Version NM_001191732.1 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus holocytochrome c synthase (Hccs), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_001191732.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGGGCTCCT CAGCATCTTC TCCTGCTACT GCAGTAAACA CCTCAAATGC TTCAGATCAT
CAGCCAGCTT CAGCTTCACC CCCTTCAGGA TGTCCAATGC ATGAAGGGCA AAGGAAAGGC
TGTCCAGTGA CTGCAGCAGC ATCTGACCTG ACCAGTGAGA GCAAAGCACA CTCTGTACCT
GCCCACCAAG ACCGGGCCTA TGAGTATGTG GAGTGCCCTG TGACCGGTGC TGCAGCCAAG
AATAAGGAGA ACCTCGATCC TTCAAACCTG ATGCCACCAC CTAATCAGAC ACCGTCCCCT
GATCAGCCAT TTGCTTTGTC TACCTCAAGA GAGGAGTCAT CAATTCCAAG AGCAGACTCT
GAGAAAAAGT GGGTTTACCC ATCTGAACAG ATGTTCTGGA ATGCCATGTT ACGGAAAGGG
TGGAAGTGGA AAGATGATGA TATTAGTCAG AAAGATATGT ATAATATCAT TAGAATTCAC
AATCAGAATA ATGAGCAAGC TTGGAAGGAG ATTTTGAAGT GGGAAGCTCT TCATGCTCAT
GAGTGTCCTT GTGGCCCATC ATTGGTCCGA TTTGGAGGCA AAGCAAGAGA GTATTCACCA
AGGGCAAGAA TTCGTTCCTG GATGGGGTAT GAATTACCTT TTGACCGCCA TGACTGGATC
ATCAATCGTT GTGGCACAGA AGTTAGGTAT GTGATTGATT ACTATGATGG CGGTGAGGTC
AACAAGGACT ACCAGTTCAC TATCCTGGAT GTGCGTCCGG CCTTTGACTC ATTCTCAGCA
GTATGGGACA GAATGAAAGT TGCTTGGTGG CGCTGGACTT CGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID ORa07511 Clone ID Related Accession (Same CDS sequence) XM_006256834.2 , NM_001191732.1 Accession Version XM_006256834.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 825bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1469376000000 Organism Rattus norvegicus(Norway rat) Product holocytochrome c synthase isoform X1 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005120.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006256834.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGGGCTCCT CAGCATCTTC TCCTGCTACT GCAGTAAACA CCTCAAATGC TTCAGATCAT
CAGCCAGCTT CAGCTTCACC CCCTTCAGGA TGTCCAATGC ATGAAGGGCA AAGGAAAGGC
TGTCCAGTGA CTGCAGCAGC ATCTGACCTG ACCAGTGAGA GCAAAGCACA CTCTGTACCT
GCCCACCAAG ACCGGGCCTA TGAGTATGTG GAGTGCCCTG TGACCGGTGC TGCAGCCAAG
AATAAGGAGA ACCTCGATCC TTCAAACCTG ATGCCACCAC CTAATCAGAC ACCGTCCCCT
GATCAGCCAT TTGCTTTGTC TACCTCAAGA GAGGAGTCAT CAATTCCAAG AGCAGACTCT
GAGAAAAAGT GGGTTTACCC ATCTGAACAG ATGTTCTGGA ATGCCATGTT ACGGAAAGGG
TGGAAGTGGA AAGATGATGA TATTAGTCAG AAAGATATGT ATAATATCAT TAGAATTCAC
AATCAGAATA ATGAGCAAGC TTGGAAGGAG ATTTTGAAGT GGGAAGCTCT TCATGCTCAT
GAGTGTCCTT GTGGCCCATC ATTGGTCCGA TTTGGAGGCA AAGCAAGAGA GTATTCACCA
AGGGCAAGAA TTCGTTCCTG GATGGGGTAT GAATTACCTT TTGACCGCCA TGACTGGATC
ATCAATCGTT GTGGCACAGA AGTTAGGTAT GTGATTGATT ACTATGATGG CGGTGAGGTC
AACAAGGACT ACCAGTTCAC TATCCTGGAT GTGCGTCCGG CCTTTGACTC ATTCTCAGCA
GTATGGGACA GAATGAAAGT TGCTTGGTGG CGCTGGACTT CGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_006256896.1 CDS 224..1048 Translation
Target ORF information:
RefSeq Version XM_006256834.2 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus holocytochrome c synthase (Hccs), transcript variant X1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_006256834.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGGGCTCCT CAGCATCTTC TCCTGCTACT GCAGTAAACA CCTCAAATGC TTCAGATCAT
CAGCCAGCTT CAGCTTCACC CCCTTCAGGA TGTCCAATGC ATGAAGGGCA AAGGAAAGGC
TGTCCAGTGA CTGCAGCAGC ATCTGACCTG ACCAGTGAGA GCAAAGCACA CTCTGTACCT
GCCCACCAAG ACCGGGCCTA TGAGTATGTG GAGTGCCCTG TGACCGGTGC TGCAGCCAAG
AATAAGGAGA ACCTCGATCC TTCAAACCTG ATGCCACCAC CTAATCAGAC ACCGTCCCCT
GATCAGCCAT TTGCTTTGTC TACCTCAAGA GAGGAGTCAT CAATTCCAAG AGCAGACTCT
GAGAAAAAGT GGGTTTACCC ATCTGAACAG ATGTTCTGGA ATGCCATGTT ACGGAAAGGG
TGGAAGTGGA AAGATGATGA TATTAGTCAG AAAGATATGT ATAATATCAT TAGAATTCAC
AATCAGAATA ATGAGCAAGC TTGGAAGGAG ATTTTGAAGT GGGAAGCTCT TCATGCTCAT
GAGTGTCCTT GTGGCCCATC ATTGGTCCGA TTTGGAGGCA AAGCAAGAGA GTATTCACCA
AGGGCAAGAA TTCGTTCCTG GATGGGGTAT GAATTACCTT TTGACCGCCA TGACTGGATC
ATCAATCGTT GTGGCACAGA AGTTAGGTAT GTGATTGATT ACTATGATGG CGGTGAGGTC
AACAAGGACT ACCAGTTCAC TATCCTGGAT GTGCGTCCGG CCTTTGACTC ATTCTCAGCA
GTATGGGACA GAATGAAAGT TGCTTGGTGG CGCTGGACTT CGTAAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Mutations of the mitochondrial holocytochrome c-type synthase in X-linked dominant microphthalmia with linear skin defects syndrome.
American journal of human genetics79(5)878-89(2006 Nov)
Wimplinger I,Morleo M,Rosenberger G,Iaconis D,Orth U,Meinecke P,Lerer I,Ballabio A,Gal A,Franco B,Kutsche K
Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria.
Cell115(5)629-40(2003 Nov)
Mootha VK,Bunkenborg J,Olsen JV,Hjerrild M,Wisniewski JR,Stahl E,Bolouri MS,Ray HN,Sihag S,Kamal M,Patterson N,Lander ES,Mann M
Complementation of a yeast CYC3 deficiency identifies an X-linked mammalian activator of apocytochrome c.
Genomics79(1)51-7(2002 Jan)
Schwarz QP,Cox TC
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