olfcq3 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	olfcq3
Entrez Gene ID	793365
Full Name	vomeronasal 2 receptor, h32
Synonyms	si:dkey-183j10.3
General protein information	Preferred Names vomeronasal 2 receptor, h32 Names vomeronasal 2 receptor, h32 Dr16-3 H32
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009293702.2	XP_009291977.1	vomeronasal 2 receptor, h32 isoform X1
NM_001082889.1	NP_001076358.1	olfactory receptor C family, q3 precursor

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	olfcw1	NP_001018157.1
Danio rerio (zebrafish)	LOC794788	XP_001334811.5
Danio rerio (zebrafish)	v2ra18	XP_697465.5
Danio rerio (zebrafish)	v2rh11	XP_002665412.2
Danio rerio (zebrafish)	v2rh10	XP_001333853.3
Danio rerio (zebrafish)	v2rh7	NP_001119923.1
Danio rerio (zebrafish)	si:dkey-47k20.1	XP_684062.4
Danio rerio (zebrafish)	si:dkey-47k20.3	XP_001332817.5
Danio rerio (zebrafish)	olfcg9	XP_005158744.1
Danio rerio (zebrafish)	LOC100007210	XP_001345723.5
Danio rerio (zebrafish)	LOC100007225	XP_001345735.3
Danio rerio (zebrafish)	LOC101884304	XP_005159271.1
Danio rerio (zebrafish)	LOC100149406	NP_001153313.1
Danio rerio (zebrafish)	olfcg8	XP_001919026.3
Danio rerio (zebrafish)	v2rh32	NP_001076358.1
Danio rerio (zebrafish)	v2rh12	XP_685037.4
Danio rerio (zebrafish)	LOC562852	NP_001121719.1
Danio rerio (zebrafish)	v2rh14	NP_001076568.1
Danio rerio (zebrafish)	olfch1	NP_001103760.1
Danio rerio (zebrafish)	LOC100007121	XP_001345668.3
Danio rerio (zebrafish)	LOC100148688	XP_001919391.3
Danio rerio (zebrafish)	si:ch211-229c8.14	XP_003200514.2
Danio rerio (zebrafish)	v2rc2	XP_001335066.3
Danio rerio (zebrafish)	LOC793310	XP_001333050.5
Danio rerio (zebrafish)	olfcg6	XP_005159270.1
Danio rerio (zebrafish)	v2ra16	XP_001334567.1
Danio rerio (zebrafish)	si:dkey-47k20.4	XP_001332729.4
Danio rerio (zebrafish)	v2rh1	XP_684341.5
Danio rerio (zebrafish)	olfcg3	NP_001103412.1
Danio rerio (zebrafish)	olfcg4	NP_001122034.1
Danio rerio (zebrafish)	LOC100537475	XP_003200513.1
Danio rerio (zebrafish)	LOC793043	XP_001332717.1
Danio rerio (zebrafish)	olfcs2	NP_001094425.1
Danio rerio (zebrafish)	v2ra17	XP_696250.6
Danio rerio (zebrafish)	v2rh9	XP_001333318.3
Danio rerio (zebrafish)	si:dkey-47k20.8	XP_683668.5
Danio rerio (zebrafish)	si:dkey-47k20.9	XP_001332214.5
Danio rerio (zebrafish)	LOC101882886	XP_005159267.1
Danio rerio (zebrafish)	olfcg2	NP_001103759.1
Danio rerio (zebrafish)	olfcg1	NP_001153312.1
Danio rerio (zebrafish)	LOC100148278	XP_001919635.1
Danio rerio (zebrafish)	v2ra1	XP_001919102.4
Danio rerio (zebrafish)	v2rh13	XP_685124.5
Danio rerio (zebrafish)	si:dkey-47k20.2	XP_683954.4
Danio rerio (zebrafish)	v2rx1	NP_001076368.1
Danio rerio (zebrafish)	olfcs1	NP_001038510.1
Danio rerio (zebrafish)	olfcd3	XP_696754.5
Danio rerio (zebrafish)	olfcd1	XP_001335160.3
Danio rerio (zebrafish)	olfcd2	NP_001074079.1
Danio rerio (zebrafish)	v2rc1	XP_001335414.4
Danio rerio (zebrafish)	si:dkey-47k20.7	XP_699729.3
Danio rerio (zebrafish)	si:dkey-47k20.5	XP_001332644.4
Danio rerio (zebrafish)	olfcq19	NP_001077346.1
Danio rerio (zebrafish)	si:ch211-203b20.4	XP_003200515.2
Danio rerio (zebrafish)	olfcg5	NP_001103413.1
Danio rerio (zebrafish)	olfcj1	NP_001103761.1

Gene Ontology
Bibliography

Related articles in PubMed

Expansion of vomeronasal receptor genes (
Yang L, Jiang H, Wang Y, Lei Y, Chen J, Sun N, Lv W, Wang C, Near TJ, He S
Communications biology2235(2019)

Overlapping but distinct topology for zebrafish V2R-like olfactory receptors reminiscent of odorant receptor spatial expression zones.
Ahuja G, Reichel V, Kowatschew D, Syed AS, Kotagiri AK, Oka Y, Weth F, Korsching SI
BMC genomics19(1)383(2018 May)

Molecular and neuronal homology between the olfactory systems of zebrafish and mouse.
Saraiva LR, Ahuja G, Ivandic I, Syed AS, Marioni JC, Korsching SI, Logan DW
Scientific reports511487(2015 Jun)

Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata.
Hashiguchi Y, Nishida M
Gene441(1-2)74-9(2009 Jul)

Evolution and origin of vomeronasal-type odorant receptor gene repertoire in fishes.
Hashiguchi Y, Nishida M
BMC evolutionary biology676(2006 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following olfcq3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the olfcq3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa04769	NM_001082889.1 Latest version!	Danio rerio olfactory receptor C family, q3 (olfcq3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ODa46814	XM_009293702.2 Latest version!	Danio rerio vomeronasal 2 receptor, h32 (v2rh32), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

olfcq3 ( NM_001082889.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001076358.1 Danio rerio olfactory receptor C family, q3 (olfcq3), mRNA.

Price & Availability↑

CloneID	ODa04769
Clone ID Related Accession (Same CDS sequence)	NM_001082889.1
Accession Version	NM_001082889.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2568bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1574438400000
Organism	Danio rerio(zebrafish)
Product	olfactory receptor C family, q3 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX901875.9. On Mar 15, 2007 this sequence version replaced XM_001331764.1. ##Evidence-Data-START## Transcript exon combination :: BC151857.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGTGTATCA CTCTAAACAT CTGCCTGCAT CTGTCCTTTA TCTTTATTTC TGTCAATTCT 
GACTCCTGTC AAATCCAGGG ACATTTCAAG TTGAACAGAA TGTATAAGGA TGGAGATTAT 
ATCATTGGAG GCTTGTTTGA GGTTCAGCAC CTCAAAGTAT TTCCAGAACT GAGTTTCCGA 
ATGGAGCCAG AACAGCCAAA GTGTGAGGAA TTCTACATGT CAAGCTTCCA GCAGGCACAG 
ACCATGGTTT TTGCTATAGA TGAGATCAAT AAGAATCCAA ACCTGTTGCC TAACATCACA 
CTTGGTTACC ATCTTTATGA CAACTGTTTA AAGCTTGTGG TGGCATTTCG GGCTGCTACA 
ACTCTTATTA GTGGGACGGA GGAAACGTTT TCAAACTTCA ACTGCACTGG CCCACCCCCA 
GTGATTGCTA TCGTTGGGGA TCCTGGGTCC ACTCATTCCA TCGCAGTTTC TAGTGTACTA 
GGCCTGTTTC ATGTCCCATT GATTAGCTAC TATGCCACAT GCTCATGTTT GAGTAACAGG 
AAAAAGTACC CCTCTTTCTT CAGAACAATC CCCAGTGATG CATTCCAGGT TCGGGCTATG 
GTTCAGATCT TAAAATATTT TGGATGGACC TGGGTTGGTG TTCTCTATAG TGATGATGAC 
TATGGCATTT ATGCTGCTCA GTCCTTCCAG CAGGAAATGC AGCGGTTCAA AGGCTGTGTG 
GCTTTTTCTG AAATAGTGCC CTATGATAAT CATAGGGACA TTCAACGCAT AGTGGCAGTT 
ATTAAGGCCT CTACAGCCAG AGTAGTCGTG GCTTTCTCAA CTGATCTGTT ACCCCTGATG 
GAAGAGCTGT TACAACAAAA TGTGACAGGC AGGCAGTGGA TTGCAAGTGA GGCATGGTCC 
ACCTCCCCTG TCCTTCATCT TCCACGTTTT GTACCTCTCG TTAGGGGCAC GCTTGGCATT 
GCTATCCATC GGGGAAAGAT CAAAGGACTT CATGAATTTC TGCTACACAT ACAACCTGAC 
AATGATCCAA CAAATAACAT GGTGAGAATT TTTTGGGAGA ACATGTTTGG GTGCAGTTTT 
GAGAAAGGCA ACGGGTATGG AGAAAAAATG TGTACAGCAC AAGAGGATCT AAACATCACA 
GTTAATGAAT ACAATGATGT ATCAGAGCTG AGAGCCTCTT ATAATGTCTA TAAGGCAGTT 
TATGCACTGG CACATGCACT TCATGATCTT ATGCAGTGTG AGGAGGGGAG AGGACCATTC 
AGTGGGAACA GCTGTGCTGA CATAACAAAA CTGAAACCTT GGCAGATGGT TCCCTACCTG 
CAAAAAGTGA ACTTCACTAC AGGCTTTGGG GATCATGTGT CATTTGATGA GAATGGAGAT 
GCTCTGGCCA TTTATGATGT GATGAACTGG CACCCCAGCT CTGATGGGTT AATTGTTGTC 
CGCACAGTAG GTGTCGTAGA TGAAGGGGCA TCAGCAGGGA GGGTCCTCAC TCTGGATGAG 
GATGCAATAT ATTGGAACTT TGAGACAAAA AAACCACCAC GGTCTGTATG CAGTGAGAGC 
TGCCCTCCAG GAACCAGACG TGCCATGAGG AAGGGCCTTC CTGTCTGCTG TTTTGACTGC 
TTGCCATGTG CGGACGGGGA GATTTCTAAT ATGTCAGATG CTACTGAATG CACATCATGT 
CCAAATGAAT TCTGGTCTAG TCCAAAAAAG GATCAATGTG TCCCAAAAGA AGTAGAATTT 
CTATCCTATG AGGATCCCCT GGGCATCTCG TTGACCACTG CTTCACTGCT TGGCACCTGC 
TTTTGTGCTC TTGTGTTGGC CGTCTTTGCT CATCACCATA ACACTCCTGT AGTACGTGCC 
AACAATTCAG AGCTCAGCTT TCTGCTGCTT TTGTCACTCA AACTGTGCTT TCTCTGTGTG 
CTGCTGTTTA TTGGTAGGCC ACAGTTATGG ACATGTCAGT TAAGACATGC CATGTTTGGC 
ATAAGTTTTG TCTTGTGTGT CTCTAGCATC CTTGTCAAGA CCATGGTGGT AATAGCTGTG 
TTCAAGTCCT CTCGACCTGA GGGTAAAAGT GCTGTGAAAT GGTTTGGAGC AGTTCAGCAA 
AGAGGTACCG TCTTGGTTCT CACTGCTGTC CAGATTGTTA TATGTGTGGT CTGGCTCTCA 
ACTGCCTCTC CAACACCCCA TAAAAACATC CTGTATGTCA GATCTAAAAT AGTATTTGAA 
TGCTCTATTG GCTCAATGGC TGGCTTTGCC ATTCTGTTGG GTTACATTGG CATCCTGGCA 
GCTGTAAGCT TCCTGTTAGC TTTTCTAGCA AGGAACCTCC CAGATAACTT TAATGAAGCC 
AAATTCATCA CATTTAGTAT GCTGATATTC AGTGCTGTGT GGATTGCATT TATTCCTGCA 
TATGTGAGCT CTCCAGGTAA ATATTCAGTC GCAGTGGAGA TATTTGCCAT TTTGGCTTCT 
AGTTTTGGAC TACTGGTTGC CATATTTGTC CCAAAGTGCT ACATCATAAT CTTACATCCA 
GAGAGAAATA CTAAAAAAGC CATCATGGGA AGAACAGCTG AAAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001076358.1
CDS	1..2568
Translation	MCITLNICLHLSFIFISVNSDSCQIQGHFKLNRMYKDGDYIIGGLFEVQHLKVFPELSFRMEPEQPKCEEFYMSSFQQAQTMVFAIDEINKNPNLLPNITLGYHLYDNCLKLVVAFRAATTLISGTEETFSNFNCTGPPPVIAIVGDPGSTHSIAVSSVLGLFHVPLISYYATCSCLSNRKKYPSFFRTIPSDAFQVRAMVQILKYFGWTWVGVLYSDDDYGIYAAQSFQQEMQRFKGCVAFSEIVPYDNHRDIQRIVAVIKASTARVVVAFSTDLLPLMEELLQQNVTGRQWIASEAWSTSPVLHLPRFVPLVRGTLGIAIHRGKIKGLHEFLLHIQPDNDPTNNMVRIFWENMFGCSFEKGNGYGEKMCTAQEDLNITVNEYNDVSELRASYNVYKAVYALAHALHDLMQCEEGRGPFSGNSCADITKLKPWQMVPYLQKVNFTTGFGDHVSFDENGDALAIYDVMNWHPSSDGLIVVRTVGVVDEGASAGRVLTLDEDAIYWNFETKKPPRSVCSESCPPGTRRAMRKGLPVCCFDCLPCADGEISNMSDATECTSCPNEFWSSPKKDQCVPKEVEFLSYEDPLGISLTTASLLGTCFCALVLAVFAHHHNTPVVRANNSELSFLLLLSLKLCFLCVLLFIGRPQLWTCQLRHAMFGISFVLCVSSILVKTMVVIAVFKSSRPEGKSAVKWFGAVQQRGTVLVLTAVQIVICVVWLSTASPTPHKNILYVRSKIVFECSIGSMAGFAILLGYIGILAAVSFLLAFLARNLPDNFNEAKFITFSMLIFSAVWIAFIPAYVSSPGKYSVAVEIFAILASSFGLLVAIFVPKCYIIILHPERNTKKAIMGRTAEK

Target ORF information:

RefSeq Version	NM_001082889.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio olfactory receptor C family, q3 (olfcq3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001082889.1

ORF Insert Sequence:

ATGTGTATCA CTCTAAACAT CTGCCTGCAT CTGTCCTTTA TCTTTATTTC TGTCAATTCT 
GACTCCTGTC AAATCCAGGG ACATTTCAAG TTGAACAGAA TGTATAAGGA TGGAGATTAT 
ATCATTGGAG GCTTGTTTGA GGTTCAGCAC CTCAAAGTAT TTCCAGAACT GAGTTTCCGA 
ATGGAGCCAG AACAGCCAAA GTGTGAGGAA TTCTACATGT CAAGCTTCCA GCAGGCACAG 
ACCATGGTTT TTGCTATAGA TGAGATCAAT AAGAATCCAA ACCTGTTGCC TAACATCACA 
CTTGGTTACC ATCTTTATGA CAACTGTTTA AAGCTTGTGG TGGCATTTCG GGCTGCTACA 
ACTCTTATTA GTGGGACGGA GGAAACGTTT TCAAACTTCA ACTGCACTGG CCCACCCCCA 
GTGATTGCTA TCGTTGGGGA TCCTGGGTCC ACTCATTCCA TCGCAGTTTC TAGTGTACTA 
GGCCTGTTTC ATGTCCCATT GATTAGCTAC TATGCCACAT GCTCATGTTT GAGTAACAGG 
AAAAAGTACC CCTCTTTCTT CAGAACAATC CCCAGTGATG CATTCCAGGT TCGGGCTATG 
GTTCAGATCT TAAAATATTT TGGATGGACC TGGGTTGGTG TTCTCTATAG TGATGATGAC 
TATGGCATTT ATGCTGCTCA GTCCTTCCAG CAGGAAATGC AGCGGTTCAA AGGCTGTGTG 
GCTTTTTCTG AAATAGTGCC CTATGATAAT CATAGGGACA TTCAACGCAT AGTGGCAGTT 
ATTAAGGCCT CTACAGCCAG AGTAGTCGTG GCTTTCTCAA CTGATCTGTT ACCCCTGATG 
GAAGAGCTGT TACAACAAAA TGTGACAGGC AGGCAGTGGA TTGCAAGTGA GGCATGGTCC 
ACCTCCCCTG TCCTTCATCT TCCACGTTTT GTACCTCTCG TTAGGGGCAC GCTTGGCATT 
GCTATCCATC GGGGAAAGAT CAAAGGACTT CATGAATTTC TGCTACACAT ACAACCTGAC 
AATGATCCAA CAAATAACAT GGTGAGAATT TTTTGGGAGA ACATGTTTGG GTGCAGTTTT 
GAGAAAGGCA ACGGGTATGG AGAAAAAATG TGTACAGCAC AAGAGGATCT AAACATCACA 
GTTAATGAAT ACAATGATGT ATCAGAGCTG AGAGCCTCTT ATAATGTCTA TAAGGCAGTT 
TATGCACTGG CACATGCACT TCATGATCTT ATGCAGTGTG AGGAGGGGAG AGGACCATTC 
AGTGGGAACA GCTGTGCTGA CATAACAAAA CTGAAACCTT GGCAGATGGT TCCCTACCTG 
CAAAAAGTGA ACTTCACTAC AGGCTTTGGG GATCATGTGT CATTTGATGA GAATGGAGAT 
GCTCTGGCCA TTTATGATGT GATGAACTGG CACCCCAGCT CTGATGGGTT AATTGTTGTC 
CGCACAGTAG GTGTCGTAGA TGAAGGGGCA TCAGCAGGGA GGGTCCTCAC TCTGGATGAG 
GATGCAATAT ATTGGAACTT TGAGACAAAA AAACCACCAC GGTCTGTATG CAGTGAGAGC 
TGCCCTCCAG GAACCAGACG TGCCATGAGG AAGGGCCTTC CTGTCTGCTG TTTTGACTGC 
TTGCCATGTG CGGACGGGGA GATTTCTAAT ATGTCAGATG CTACTGAATG CACATCATGT 
CCAAATGAAT TCTGGTCTAG TCCAAAAAAG GATCAATGTG TCCCAAAAGA AGTAGAATTT 
CTATCCTATG AGGATCCCCT GGGCATCTCG TTGACCACTG CTTCACTGCT TGGCACCTGC 
TTTTGTGCTC TTGTGTTGGC CGTCTTTGCT CATCACCATA ACACTCCTGT AGTACGTGCC 
AACAATTCAG AGCTCAGCTT TCTGCTGCTT TTGTCACTCA AACTGTGCTT TCTCTGTGTG 
CTGCTGTTTA TTGGTAGGCC ACAGTTATGG ACATGTCAGT TAAGACATGC CATGTTTGGC 
ATAAGTTTTG TCTTGTGTGT CTCTAGCATC CTTGTCAAGA CCATGGTGGT AATAGCTGTG 
TTCAAGTCCT CTCGACCTGA GGGTAAAAGT GCTGTGAAAT GGTTTGGAGC AGTTCAGCAA 
AGAGGTACCG TCTTGGTTCT CACTGCTGTC CAGATTGTTA TATGTGTGGT CTGGCTCTCA 
ACTGCCTCTC CAACACCCCA TAAAAACATC CTGTATGTCA GATCTAAAAT AGTATTTGAA 
TGCTCTATTG GCTCAATGGC TGGCTTTGCC ATTCTGTTGG GTTACATTGG CATCCTGGCA 
GCTGTAAGCT TCCTGTTAGC TTTTCTAGCA AGGAACCTCC CAGATAACTT TAATGAAGCC 
AAATTCATCA CATTTAGTAT GCTGATATTC AGTGCTGTGT GGATTGCATT TATTCCTGCA 
TATGTGAGCT CTCCAGGTAA ATATTCAGTC GCAGTGGAGA TATTTGCCAT TTTGGCTTCT 
AGTTTTGGAC TACTGGTTGC CATATTTGTC CCAAAGTGCT ACATCATAAT CTTACATCCA 
GAGAGAAATA CTAAAAAAGC CATCATGGGA AGAACAGCTG AAAAATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

olfcq3 ( XM_009293702.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_009291977.1 Danio rerio vomeronasal 2 receptor, h32 (v2rh32), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa46814
Clone ID Related Accession (Same CDS sequence)	XM_009293702.2
Accession Version	XM_009293702.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2475bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	vomeronasal 2 receptor, h32 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007129.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_009293702.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTGTATCA CTCTAAACAT CTGCCTGCAT CTGTCCTTTA TCTTTATTTC TGTCAATTCT 
GACTCCTGTC AAATCCAGGG ACATTTCAAG TTGAACAGAA TGTATAAGGA TGGAGATTAT 
ATCATTGGAG GCTTGTTTGA GGTTCAGCAC CTCAAAGTAT TTCCAGAACT GAGTTTCCGA 
ATGGAGCCAG AACAGCCAAA GTGTGAGGAA TTCTACATGT CAAGCTTCCA GCAGGCACAG 
ACCATGGTTT TTGCTATAGA TGAGATCAAT AAGAATCCAA ACCTGTTGCC TAACATCACA 
CTTGGTTACC ATCTTTATGA CAACTGTTTA AAGCTTGTGG TGGCATTTCG GGCTGCTACA 
ACTCTTATTA GTGGGACGGA GGAAACGTTT TCAAACTTCA ACTGCACTGG CCCACCCCCA 
GTGATTGCTA TCGTTGGGGA TCCTGGGTCC ACTCATTCCA TCGCAGTTTC TAGTGTACTA 
GGCCTGTTTC ATGTCCCATT GATTAGCTAC TATGCCACAT GCTCATGTTT GAGTAACAGG 
AAAAAGTACC CCTCTTTCTT CAGAACAATC CCCAGTGATG CATTCCAGTC CTTCCAGCAG 
GAAATGCAGC GGTTCAAAGG CTGTGTGGCT TTTTCTGAAA TAGTGCCCTA TGATAATCAT 
AGGGACATTC AACGCATAGT GGCAGTTATT AAGGCCTCTA CAGCCAGAGT AGTCGTGGCT 
TTCTCAACTG ATCTGTTACC CCTGATGGAA GAGCTGTTAC AACAAAATGT GACAGGCAGG 
CAGTGGATTG CAAGTGAGGC ATGGTCCACC TCCCCTGTCC TTCATCTTCC ACGTTTTGTA 
CCTCTCGTTA GGGGCACGCT TGGCATTGCT ATCCATCGGG GAAAGATCAA AGGACTTCAT 
GAATTTCTGC TACACATACA ACCTGACAAT GATCCAACAA ATAACATGGT GAGAATTTTT 
TGGGAGAACA TGTTTGGGTG CAGTTTTGAG AAAGGCAACG GGTATGGAGA AAAAATGTGT 
ACAGCACAAG AGGATCTAAA CATCACAGTT AATGAATACA ATGATGTATC AGAGCTGAGA 
GCCTCTTATA ATGTCTATAA GGCAGTTTAT GCACTGGCAC ATGCACTTCA TGATCTTATG 
CAGTGTGAGG AGGGGAGAGG ACCATTCAGT GGGAACAGCT GTGCTGACAT AACAAAACTG 
AAACCTTGGC AGATGGTTCC CTACCTGCAA AAAGTGAACT TCACTACAGG CTTTGGGGAT 
CATGTGTCAT TTGATGAGAA TGGAGATGCT CTGGCCATTT ATGATGTGAT GAACTGGCAC 
CCCAGCTCTG ATGGGTTAAT TGTTGTCCGC ACAGTAGGTG TCGTAGATGA AGGGGCATCA 
GCAGGGAGGG TCCTCACTCT GGATGAGGAT GCAATATATT GGAACTTTGA GACAAAAAAA 
CCACCACGGT CTGTATGCAG TGAGAGCTGC CCTCCAGGAA CCAGACGTGC CATGAGGAAG 
GGCCTTCCTG TCTGCTGTTT TGACTGCTTG CCATGTGCGG ACGGGGAGAT TTCTAATATG 
TCAGATGCTA CTGAATGCAC ATCATGTCCA AATGAATTCT GGTCTAGTCC AAAAAAGGAT 
CAATGTGTCC CAAAAGAAGT AGAATTTCTA TCCTATGAGG ATCCCCTGGG CATCTCGTTG 
ACCACTGCTT CACTGCTTGG CACCTGCTTT TGTGCTCTTG TGTTGGCCGT CTTTGCTCAT 
CACCATAACA CTCCTGTAGT ACGTGCCAAC AATTCAGAGC TCAGCTTTCT GCTGCTTTTG 
TCACTCAAAC TGTGCTTTCT CTGTGTGCTG CTGTTTATTG GTAGGCCACA GTTATGGACA 
TGTCAGTTAA GACATGCCAT GTTTGGCATA AGTTTTGTCT TGTGTGTCTC TAGCATCCTT 
GTCAAGACCA TGGTGGTAAT AGCTGTGTTC AAGTCCTCTC GACCTGAGGG TAAAAGTGCT 
GTGAAATGGT TTGGAGCAGT TCAGCAAAGA GGTACCGTCT TGGTTCTCAC TGCTGTCCAG 
ATTGTTATAT GTGTGGTCTG GCTCTCAACT GCCTCTCCAA CACCCCATAA AAACATCCTG 
TATGTCAGAT CTAAAATAGT ATTTGAATGC TCTATTGGCT CAATGGCTGG CTTTGCCATT 
CTGTTGGGTT ACATTGGCAT CCTGGCAGCT GTAAGCTTCC TGTTAGCTTT TCTAGCAAGG 
AACCTCCCAG ATAACTTTAA TGAAGCCAAA TTCATCACAT TTAGTATGCT GATATTCAGT 
GCTGTGTGGA TTGCATTTAT TCCTGCATAT GTGAGCTCTC CAGGTAAATA TTCAGTCGCA 
GTGGAGATAT TTGCCATTTT GGCTTCTAGT TTTGGACTAC TGGTTGCCAT ATTTGTCCCA 
AAGTGCTACA TCATAATCTT ACATCCAGAG AGAAATACTA AAAAAGCCAT CATGGGAAGA 
ACAGCTGAAA AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009291977.1
CDS	38..2512
Translation	MCITLNICLHLSFIFISVNSDSCQIQGHFKLNRMYKDGDYIIGGLFEVQHLKVFPELSFRMEPEQPKCEEFYMSSFQQAQTMVFAIDEINKNPNLLPNITLGYHLYDNCLKLVVAFRAATTLISGTEETFSNFNCTGPPPVIAIVGDPGSTHSIAVSSVLGLFHVPLISYYATCSCLSNRKKYPSFFRTIPSDAFQSFQQEMQRFKGCVAFSEIVPYDNHRDIQRIVAVIKASTARVVVAFSTDLLPLMEELLQQNVTGRQWIASEAWSTSPVLHLPRFVPLVRGTLGIAIHRGKIKGLHEFLLHIQPDNDPTNNMVRIFWENMFGCSFEKGNGYGEKMCTAQEDLNITVNEYNDVSELRASYNVYKAVYALAHALHDLMQCEEGRGPFSGNSCADITKLKPWQMVPYLQKVNFTTGFGDHVSFDENGDALAIYDVMNWHPSSDGLIVVRTVGVVDEGASAGRVLTLDEDAIYWNFETKKPPRSVCSESCPPGTRRAMRKGLPVCCFDCLPCADGEISNMSDATECTSCPNEFWSSPKKDQCVPKEVEFLSYEDPLGISLTTASLLGTCFCALVLAVFAHHHNTPVVRANNSELSFLLLLSLKLCFLCVLLFIGRPQLWTCQLRHAMFGISFVLCVSSILVKTMVVIAVFKSSRPEGKSAVKWFGAVQQRGTVLVLTAVQIVICVVWLSTASPTPHKNILYVRSKIVFECSIGSMAGFAILLGYIGILAAVSFLLAFLARNLPDNFNEAKFITFSMLIFSAVWIAFIPAYVSSPGKYSVAVEIFAILASSFGLLVAIFVPKCYIIILHPERNTKKAIMGRTAEK

Target ORF information:

RefSeq Version	XM_009293702.2
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio vomeronasal 2 receptor, h32 (v2rh32), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009293702.2

ORF Insert Sequence:

ATGTGTATCA CTCTAAACAT CTGCCTGCAT CTGTCCTTTA TCTTTATTTC TGTCAATTCT 
GACTCCTGTC AAATCCAGGG ACATTTCAAG TTGAACAGAA TGTATAAGGA TGGAGATTAT 
ATCATTGGAG GCTTGTTTGA GGTTCAGCAC CTCAAAGTAT TTCCAGAACT GAGTTTCCGA 
ATGGAGCCAG AACAGCCAAA GTGTGAGGAA TTCTACATGT CAAGCTTCCA GCAGGCACAG 
ACCATGGTTT TTGCTATAGA TGAGATCAAT AAGAATCCAA ACCTGTTGCC TAACATCACA 
CTTGGTTACC ATCTTTATGA CAACTGTTTA AAGCTTGTGG TGGCATTTCG GGCTGCTACA 
ACTCTTATTA GTGGGACGGA GGAAACGTTT TCAAACTTCA ACTGCACTGG CCCACCCCCA 
GTGATTGCTA TCGTTGGGGA TCCTGGGTCC ACTCATTCCA TCGCAGTTTC TAGTGTACTA 
GGCCTGTTTC ATGTCCCATT GATTAGCTAC TATGCCACAT GCTCATGTTT GAGTAACAGG 
AAAAAGTACC CCTCTTTCTT CAGAACAATC CCCAGTGATG CATTCCAGTC CTTCCAGCAG 
GAAATGCAGC GGTTCAAAGG CTGTGTGGCT TTTTCTGAAA TAGTGCCCTA TGATAATCAT 
AGGGACATTC AACGCATAGT GGCAGTTATT AAGGCCTCTA CAGCCAGAGT AGTCGTGGCT 
TTCTCAACTG ATCTGTTACC CCTGATGGAA GAGCTGTTAC AACAAAATGT GACAGGCAGG 
CAGTGGATTG CAAGTGAGGC ATGGTCCACC TCCCCTGTCC TTCATCTTCC ACGTTTTGTA 
CCTCTCGTTA GGGGCACGCT TGGCATTGCT ATCCATCGGG GAAAGATCAA AGGACTTCAT 
GAATTTCTGC TACACATACA ACCTGACAAT GATCCAACAA ATAACATGGT GAGAATTTTT 
TGGGAGAACA TGTTTGGGTG CAGTTTTGAG AAAGGCAACG GGTATGGAGA AAAAATGTGT 
ACAGCACAAG AGGATCTAAA CATCACAGTT AATGAATACA ATGATGTATC AGAGCTGAGA 
GCCTCTTATA ATGTCTATAA GGCAGTTTAT GCACTGGCAC ATGCACTTCA TGATCTTATG 
CAGTGTGAGG AGGGGAGAGG ACCATTCAGT GGGAACAGCT GTGCTGACAT AACAAAACTG 
AAACCTTGGC AGATGGTTCC CTACCTGCAA AAAGTGAACT TCACTACAGG CTTTGGGGAT 
CATGTGTCAT TTGATGAGAA TGGAGATGCT CTGGCCATTT ATGATGTGAT GAACTGGCAC 
CCCAGCTCTG ATGGGTTAAT TGTTGTCCGC ACAGTAGGTG TCGTAGATGA AGGGGCATCA 
GCAGGGAGGG TCCTCACTCT GGATGAGGAT GCAATATATT GGAACTTTGA GACAAAAAAA 
CCACCACGGT CTGTATGCAG TGAGAGCTGC CCTCCAGGAA CCAGACGTGC CATGAGGAAG 
GGCCTTCCTG TCTGCTGTTT TGACTGCTTG CCATGTGCGG ACGGGGAGAT TTCTAATATG 
TCAGATGCTA CTGAATGCAC ATCATGTCCA AATGAATTCT GGTCTAGTCC AAAAAAGGAT 
CAATGTGTCC CAAAAGAAGT AGAATTTCTA TCCTATGAGG ATCCCCTGGG CATCTCGTTG 
ACCACTGCTT CACTGCTTGG CACCTGCTTT TGTGCTCTTG TGTTGGCCGT CTTTGCTCAT 
CACCATAACA CTCCTGTAGT ACGTGCCAAC AATTCAGAGC TCAGCTTTCT GCTGCTTTTG 
TCACTCAAAC TGTGCTTTCT CTGTGTGCTG CTGTTTATTG GTAGGCCACA GTTATGGACA 
TGTCAGTTAA GACATGCCAT GTTTGGCATA AGTTTTGTCT TGTGTGTCTC TAGCATCCTT 
GTCAAGACCA TGGTGGTAAT AGCTGTGTTC AAGTCCTCTC GACCTGAGGG TAAAAGTGCT 
GTGAAATGGT TTGGAGCAGT TCAGCAAAGA GGTACCGTCT TGGTTCTCAC TGCTGTCCAG 
ATTGTTATAT GTGTGGTCTG GCTCTCAACT GCCTCTCCAA CACCCCATAA AAACATCCTG 
TATGTCAGAT CTAAAATAGT ATTTGAATGC TCTATTGGCT CAATGGCTGG CTTTGCCATT 
CTGTTGGGTT ACATTGGCAT CCTGGCAGCT GTAAGCTTCC TGTTAGCTTT TCTAGCAAGG 
AACCTCCCAG ATAACTTTAA TGAAGCCAAA TTCATCACAT TTAGTATGCT GATATTCAGT 
GCTGTGTGGA TTGCATTTAT TCCTGCATAT GTGAGCTCTC CAGGTAAATA TTCAGTCGCA 
GTGGAGATAT TTGCCATTTT GGCTTCTAGT TTTGGACTAC TGGTTGCCAT ATTTGTCCCA 
AAGTGCTACA TCATAATCTT ACATCCAGAG AGAAATACTA AAAAAGCCAT CATGGGAAGA 
ACAGCTGAAA AATAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Expansion of vomeronasal receptor genes (
Communications biology2235(2019)
Yang L,Jiang H,Wang Y,Lei Y,Chen J,Sun N,Lv W,Wang C,Near TJ,He S

Overlapping but distinct topology for zebrafish V2R-like olfactory receptors reminiscent of odorant receptor spatial expression zones.
BMC genomics19(1)383(2018 May)
Ahuja G,Reichel V,Kowatschew D,Syed AS,Kotagiri AK,Oka Y,Weth F,Korsching SI

Molecular and neuronal homology between the olfactory systems of zebrafish and mouse.
Scientific reports511487(2015 Jun)
Saraiva LR,Ahuja G,Ivandic I,Syed AS,Marioni JC,Korsching SI,Logan DW

Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata.
Gene441(1-2)74-9(2009 Jul)
Hashiguchi Y,Nishida M

Evolution and origin of vomeronasal-type odorant receptor gene repertoire in fishes.
BMC evolutionary biology676(2006 Oct)
Hashiguchi Y,Nishida M

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olfcq3 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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