trpc4apa cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	trpc4apa
Entrez Gene ID	58090
Full Name	transient receptor potential cation channel, subfamily C, member 4 associated protein a
Synonyms	tap1a,wu:fb15d09,zgc:109818
General protein information	Preferred Names transient receptor potential cation channel, subfamily C, member 4 associated protein a Names short transient receptor potential channel 4-associated protein trp4-associated protein 1a
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_131569.2	NP_571644.1	short transient receptor potential channel 4-associated protein

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	TRPC4AP	XP_851670.2
Homo sapiens (human)	TRPC4AP	NP_056453.1
Bos taurus (cattle)	TRPC4AP	NP_001193759.1
Xenopus tropicalis (tropical clawed frog)	trpc4ap	NP_001120170.1
Pan troglodytes (chimpanzee)	TRPC4AP	XP_003316922.1
Mus musculus (house mouse)	Trpc4ap	NP_001156924.1
Danio rerio (zebrafish)	trpc4apa	NP_571644.1
Rattus norvegicus (Norway rat)	Trpc4ap	NP_001094218.1
Gallus gallus (chicken)	TRPC4AP	NP_001034406.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution and Distribution of Teleost myomiRNAs: Functionally Diversified myomiRs in Teleosts.
Siddique BS, Kinoshita S, Wongkarangkana C, Asakawa S, Watabe S
Marine biotechnology (New York, N.Y.)18(3)436-47(2016 Jun)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Identification and expression analysis of the zebrafish orthologues of the mammalian MAP1LC3 gene family.
Ganesan S, Moussavi Nik SH, Newman M, Lardelli M
Experimental cell research328(1)228-37(2014 Oct)

Evolution and genomic organization of muscle microRNAs in fish genomes.
Nachtigall PG, Dias MC, Pinhal D
BMC evolutionary biology14196(2014 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following trpc4apa gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the trpc4apa cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00757	NM_131569.2 Latest version!	Danio rerio transient receptor potential cation channel, subfamily C, member 4 associated protein a (trpc4apa), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

trpc4apa ( NM_131569.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571644.1 Danio rerio transient receptor potential cation channel, subfamily C, member 4 associated protein a (trpc4apa), mRNA.

Price & Availability↑

CloneID	ODa00757
Clone ID Related Accession (Same CDS sequence)	NM_131569.2
Accession Version	NM_131569.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2325bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	short transient receptor potential channel 4-associated protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF130459.1. On Aug 31, 2012 this sequence version replaced NM_131569.1. ##Evidence-Data-START## Transcript exon combination :: AF130459.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGACGC TACTGGGGCC CGAGTCCCCT TGTATCGGTG GAAAGAAGCG GACTCGAAAC 
AGGAATATCA TCACCAGAAT ACGGCAAAGT CAGATCGGTG GCCGAGGCTT CAGCAGAGGG 
ACGCAGCTCC CCGAAGTTCT TCTTCAGGAG AGAGATAAAA GGGCGAAATG GCACGGGATT 
CCTGTTTTAC TCCAGGAGCT GTACGAGAGC AGCCACCTGA ACACTGACTT CACCCGAACA 
CACACTGTCC TGAAGGAGCT GTCATCTCTA CTGTCTATGG AGGCCATGTC TTTTGTGACG 
GAAGACAGAA AGCCTGCGCA GGAGTCTACC TTTCCCAATA CTTACACTTT TGATCTGTTT 
GGAGGTGTAG ATTTACTGGT TGAACTTCTG ATGAGACCTA CCCTGACTAC ACTACAGAAG 
CCCAAAATGA ATGATGACTT GGTAAAGGAC TGCCTAAGCG TGTTGTATAA CTGCTGCATA 
TGTACTGAAG GAGTCACAAA AAGCCTGGCG TCAAGAGATG ATTTTGTATT ATTTCTGTTC 
ACCTTGATGA CAAACAAGAA GACATTTTTG CAAACAGCTA CATTAATTGA GGATATTCTT 
GGAGTTAAGA AGGAAATGAT ACAGCTTGAG TGGATCCCGA ATCTGTCAGG ACTGGTTCAG 
AGCTTTGACC AGCAGCAGCT CGCCAACTTC TGTCGGATTC TCTCAGTCAC CATATCTGAG 
CCTGACGTGG GGAATGATGA CAAACACACA CTTCTGGCTA AAAATGCACA GCAGAAACGC 
AACACCAGCC CTTCGCGTGC AGAGGTCAAC CAGGTCACTC TGCTGAACAT CCCTGGCTTC 
ATTGAGCGTC TCTGTAAGTT GGCAACACGG AAGGTGTCTG AGGCAACCGG AACGTCAAAT 
TTTCTGCAGG AACTGGAGGA GTGGTACACC TGGCTCGACA ACACGCTAGT ACTGGATGCT 
CTCATGCAGA TAGCAACTGA TGAAGCCGAG CACAGCAGCA CAGAATCGTC TGATGAGAGT 
ACATTGGCCA CCATCCCGCT GAGACATCGC TTACCACAGT CCATGAAGAT AGTCCATGAG 
ATCATGTACA AGGTGGAAGT GCTTTACGTG CTTTGTGTCC TGCTCATGGG TCGACAGCGG 
AACCAGGTGC ATAAAATGTT GGCGGAGTTT CGTTTGATTC CTGGACTCAA CAACCTTTTC 
GACAAGCTCA TCTGGAGGAA ATACACCGCC TCTAATCATG TGGTTCACGG ACAGAATGAA 
AACTGTGATT GTAGCCCGGA AATCTCATTT AAAATCCAGT TCTTGAGGCT TCTGCAGAGC 
TTCAGTGACC ACCACGAAAA TAAGTACCTA CTTCTCAACG CTCAGGAGCT GAATGAGTTG 
AGTGCCATTT CCCTAAAGGC AAACATCCCT GAGGTGGAGG CATTAGTAAA CACAGACAGG 
AGTTTAGTGT GTGATGGTAA AAAAGGGCTC CTCACGCGGG TCCTAACAGT TATGAAAAAA 
GAACCCCCAG ACTCTTCCTT CAGATTCTGG CAGGCCAAAG CTGTTGAGAG CTTTCTGAGA 
GGAGCCACAT CATATGCAGA CCAGATGTTT TTGCTGAAGA GAGGCTTGCT GGAGCACATC 
CTCTTCTGCA TCATTGACAG CGGCTGCAAG TCCAGAGATG TCCTGCAGAG CTACTTTGAC 
CTGCTCGGGG AGCTTATGAA GTTCAATATT GATTCCTTCA AGAGATTCAA CAAATATGTG 
AACACAGACG AAAAGTTCCA GGTGTTCCTC ACACAGATCA ACAGCTCTCT GGTTGACTCC 
AACATGCTGG TCCGCTGTAT TGTGCTCTCG CTGGATCGCT TCGAGAGCCA GACGGAGGAT 
GTGAAAGTGG TTGAAGTGCT CTCCGAGTGC TGTCTCCTGT CCTACATGGC TCGAGTGGAG 
AACAGGCTGT CCTTTCTTTT TAGGCTGGTC AACATCATCA ACGTGCAGAC CCTCACACAG 
GAGAACGTGA GTTGTCTTAA CACCAGCCTG GTGATTCTGA TGTTGGCCCG GAGGAGAGGC 
AAGCTCCCGT TTTACCTGAA CGCCCTGCGG GAGAAGGAAT ATGCAGAGAA ATATCCTGGA 
TGCCTGCTCA ACAACTTCCA CAACCTGCTG CGCTTTTGGC AGCACCACTA CCTCAACAAA 
GACAAGGACA GCACCTGCCT AGAGAATAGT TCCTGTATTC CCTTCAGTTT CTGGAAGGAG 
ACAGTATCAG TTCTGCTCGG ACAGGACAGG ACTTCTCCCT GTGCCATTAT CAGCTACATA 
GACGAGCCTT ACATGGAGCT GGACCGGGAC CTTCTGGAGG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571644.1
CDS	11..2335
Translation	MATLLGPESPCIGGKKRTRNRNIITRIRQSQIGGRGFSRGTQLPEVLLQERDKRAKWHGIPVLLQELYESSHLNTDFTRTHTVLKELSSLLSMEAMSFVTEDRKPAQESTFPNTYTFDLFGGVDLLVELLMRPTLTTLQKPKMNDDLVKDCLSVLYNCCICTEGVTKSLASRDDFVLFLFTLMTNKKTFLQTATLIEDILGVKKEMIQLEWIPNLSGLVQSFDQQQLANFCRILSVTISEPDVGNDDKHTLLAKNAQQKRNTSPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGTSNFLQELEEWYTWLDNTLVLDALMQIATDEAEHSSTESSDESTLATIPLRHRLPQSMKIVHEIMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNENCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNAQELNELSAISLKANIPEVEALVNTDRSLVCDGKKGLLTRVLTVMKKEPPDSSFRFWQAKAVESFLRGATSYADQMFLLKRGLLEHILFCIIDSGCKSRDVLQSYFDLLGELMKFNIDSFKRFNKYVNTDEKFQVFLTQINSSLVDSNMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLVNIINVQTLTQENVSCLNTSLVILMLARRRGKLPFYLNALREKEYAEKYPGCLLNNFHNLLRFWQHHYLNKDKDSTCLENSSCIPFSFWKETVSVLLGQDRTSPCAIISYIDEPYMELDRDLLED

Target ORF information:

RefSeq Version	NM_131569.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio transient receptor potential cation channel, subfamily C, member 4 associated protein a (trpc4apa), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131569.2

ORF Insert Sequence:

ATGGCGACGC TACTGGGGCC CGAGTCCCCT TGTATCGGTG GAAAGAAGCG GACTCGAAAC 
AGGAATATCA TCACCAGAAT ACGGCAAAGT CAGATCGGTG GCCGAGGCTT CAGCAGAGGG 
ACGCAGCTCC CCGAAGTTCT TCTTCAGGAG AGAGATAAAA GGGCGAAATG GCACGGGATT 
CCTGTTTTAC TCCAGGAGCT GTACGAGAGC AGCCACCTGA ACACTGACTT CACCCGAACA 
CACACTGTCC TGAAGGAGCT GTCATCTCTA CTGTCTATGG AGGCCATGTC TTTTGTGACG 
GAAGACAGAA AGCCTGCGCA GGAGTCTACC TTTCCCAATA CTTACACTTT TGATCTGTTT 
GGAGGTGTAG ATTTACTGGT TGAACTTCTG ATGAGACCTA CCCTGACTAC ACTACAGAAG 
CCCAAAATGA ATGATGACTT GGTAAAGGAC TGCCTAAGCG TGTTGTATAA CTGCTGCATA 
TGTACTGAAG GAGTCACAAA AAGCCTGGCG TCAAGAGATG ATTTTGTATT ATTTCTGTTC 
ACCTTGATGA CAAACAAGAA GACATTTTTG CAAACAGCTA CATTAATTGA GGATATTCTT 
GGAGTTAAGA AGGAAATGAT ACAGCTTGAG TGGATCCCGA ATCTGTCAGG ACTGGTTCAG 
AGCTTTGACC AGCAGCAGCT CGCCAACTTC TGTCGGATTC TCTCAGTCAC CATATCTGAG 
CCTGACGTGG GGAATGATGA CAAACACACA CTTCTGGCTA AAAATGCACA GCAGAAACGC 
AACACCAGCC CTTCGCGTGC AGAGGTCAAC CAGGTCACTC TGCTGAACAT CCCTGGCTTC 
ATTGAGCGTC TCTGTAAGTT GGCAACACGG AAGGTGTCTG AGGCAACCGG AACGTCAAAT 
TTTCTGCAGG AACTGGAGGA GTGGTACACC TGGCTCGACA ACACGCTAGT ACTGGATGCT 
CTCATGCAGA TAGCAACTGA TGAAGCCGAG CACAGCAGCA CAGAATCGTC TGATGAGAGT 
ACATTGGCCA CCATCCCGCT GAGACATCGC TTACCACAGT CCATGAAGAT AGTCCATGAG 
ATCATGTACA AGGTGGAAGT GCTTTACGTG CTTTGTGTCC TGCTCATGGG TCGACAGCGG 
AACCAGGTGC ATAAAATGTT GGCGGAGTTT CGTTTGATTC CTGGACTCAA CAACCTTTTC 
GACAAGCTCA TCTGGAGGAA ATACACCGCC TCTAATCATG TGGTTCACGG ACAGAATGAA 
AACTGTGATT GTAGCCCGGA AATCTCATTT AAAATCCAGT TCTTGAGGCT TCTGCAGAGC 
TTCAGTGACC ACCACGAAAA TAAGTACCTA CTTCTCAACG CTCAGGAGCT GAATGAGTTG 
AGTGCCATTT CCCTAAAGGC AAACATCCCT GAGGTGGAGG CATTAGTAAA CACAGACAGG 
AGTTTAGTGT GTGATGGTAA AAAAGGGCTC CTCACGCGGG TCCTAACAGT TATGAAAAAA 
GAACCCCCAG ACTCTTCCTT CAGATTCTGG CAGGCCAAAG CTGTTGAGAG CTTTCTGAGA 
GGAGCCACAT CATATGCAGA CCAGATGTTT TTGCTGAAGA GAGGCTTGCT GGAGCACATC 
CTCTTCTGCA TCATTGACAG CGGCTGCAAG TCCAGAGATG TCCTGCAGAG CTACTTTGAC 
CTGCTCGGGG AGCTTATGAA GTTCAATATT GATTCCTTCA AGAGATTCAA CAAATATGTG 
AACACAGACG AAAAGTTCCA GGTGTTCCTC ACACAGATCA ACAGCTCTCT GGTTGACTCC 
AACATGCTGG TCCGCTGTAT TGTGCTCTCG CTGGATCGCT TCGAGAGCCA GACGGAGGAT 
GTGAAAGTGG TTGAAGTGCT CTCCGAGTGC TGTCTCCTGT CCTACATGGC TCGAGTGGAG 
AACAGGCTGT CCTTTCTTTT TAGGCTGGTC AACATCATCA ACGTGCAGAC CCTCACACAG 
GAGAACGTGA GTTGTCTTAA CACCAGCCTG GTGATTCTGA TGTTGGCCCG GAGGAGAGGC 
AAGCTCCCGT TTTACCTGAA CGCCCTGCGG GAGAAGGAAT ATGCAGAGAA ATATCCTGGA 
TGCCTGCTCA ACAACTTCCA CAACCTGCTG CGCTTTTGGC AGCACCACTA CCTCAACAAA 
GACAAGGACA GCACCTGCCT AGAGAATAGT TCCTGTATTC CCTTCAGTTT CTGGAAGGAG 
ACAGTATCAG TTCTGCTCGG ACAGGACAGG ACTTCTCCCT GTGCCATTAT CAGCTACATA 
GACGAGCCTT ACATGGAGCT GGACCGGGAC CTTCTGGAGG ATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution and Distribution of Teleost myomiRNAs: Functionally Diversified myomiRs in Teleosts.
Marine biotechnology (New York, N.Y.)18(3)436-47(2016 Jun)
Siddique BS,Kinoshita S,Wongkarangkana C,Asakawa S,Watabe S

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Identification and expression analysis of the zebrafish orthologues of the mammalian MAP1LC3 gene family.
Experimental cell research328(1)228-37(2014 Oct)
Ganesan S,Moussavi Nik SH,Newman M,Lardelli M

Evolution and genomic organization of muscle microRNAs in fish genomes.
BMC evolutionary biology14196(2014 Sep)
Nachtigall PG,Dias MC,Pinhal D

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trpc4apa cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

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