xpr1a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	xpr1a
Entrez Gene ID	100170805
Full Name	xenotropic and polytropic retrovirus receptor 1a
Synonyms	si:dkey-6n6.7
General protein information	Preferred Names xenotropic and polytropic retrovirus receptor 1a Names xenotropic and polytropic retrovirus receptor 1 xpr1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001245100.1	NP_001232029.1	xenotropic and polytropic retrovirus receptor 1

Pathways from BioSystems

Homologies

Oryza sativa (rice)	Os06g0493600	NP_001057682.1
Arabidopsis thaliana (thale cress)	PHO1;H1	NP_564940.1
Xenopus tropicalis (tropical clawed frog)	xpr1	NP_001016753.1
Kluyveromyces lactis	KLLA0F27467g	XP_456302.1
Schizosaccharomyces pombe (fission yeast)	SPCC1827.07c	NP_588554.2
Homo sapiens (human)	XPR1	NP_004727.2
Macaca mulatta (Rhesus monkey)	XPR1	XP_001115004.2
Canis lupus familiaris (dog)	XPR1	NP_001184089.1
Gallus gallus (chicken)	XPR1	XP_003641709.1
Magnaporthe oryzae (rice blast fungus)	MGG_13413	XP_003711457.1
Neurospora crassa	NCU04201	XP_961161.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP005557	XP_315560.2
Mus musculus (house mouse)	Xpr1	NP_035403.1
Drosophila melanogaster (fruit fly)	CG10483	NP_648000.1
Danio rerio (zebrafish)	si:dkey-6n6.7	NP_001232029.1
Pan troglodytes (chimpanzee)	XPR1	XP_524986.2
Bos taurus (cattle)	XPR1	NP_001179812.1
Eremothecium gossypii	AGOS_ADL080W	NP_984016.2
Rattus norvegicus (Norway rat)	Xpr1	NP_001099462.1
Saccharomyces cerevisiae (baker's yeast)	SYG1	NP_012217.3

Gene Ontology
Bibliography

Related articles in PubMed

Pla2g6 Deficiency in Zebrafish Leads to Dopaminergic Cell Death, Axonal Degeneration, Increased β-Synuclein Expression, and Defects in Brain Functions and Pathways.
Sánchez E, Azcona LJ, Paisán-Ruiz C
Molecular neurobiology55(8)6734-6754(2018 Aug)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The phosphate exporter xpr1b is required for differentiation of tissue-resident macrophages.
Meireles AM, Shiau CE, Guenther CA, Sidik H, Kingsley DM, Talbot WS
Cell reports8(6)1659-1667(2014 Sep)

Reverse genetic analysis of neurogenesis in the zebrafish retina.
Pujic Z, Omori Y, Tsujikawa M, Thisse B, Thisse C, Malicki J
Developmental biology293(2)330-47(2006 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following xpr1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the xpr1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35267	NM_001245100.1 Latest version!	Danio rerio xenotropic and polytropic retrovirus receptor 1a (xpr1a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

xpr1a ( NM_001245100.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001232029.1 Danio rerio xenotropic and polytropic retrovirus receptor 1a (xpr1a), mRNA.

Price & Availability↑

CloneID	ODa35267
Clone ID Related Accession (Same CDS sequence)	NM_001245100.1
Accession Version	NM_001245100.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2079bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	xenotropic and polytropic retrovirus receptor 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163273.1. ##Evidence-Data-START## Transcript exon combination :: BC163273.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAGTTTG CGGAGCACTT GTCCGCCCAT ATTACTCCAG AATGGAGGAA ACAGTACATT 
CAGTATGAGG CTTTCAAGGA GATGCTGTAT GCGGCCCAGG ATCAGGCCCC ATCCTTAGAA 
GTCACAGATG AGGACACCGT CAAACGATAC TATGCCAAGT TTGAAGAGAA GTTCTTTCAG 
ACGTGCGAAA AGGAGCTTTC CAAGATCAAC ACATTCTATT CAGAGAAACT GGCCGAGGCA 
CAGCGACGGT TTGCTACTTT GCAGAATGAG TTGCAGACGT CTCTTGATGC TCAGCGGGAG 
AGCAACGCTC CAGCCCTGCG CAGTCGCCGC AAAACTGTGC TCCCACTGTC CAACAAGGAG 
CGCAACAAAC ATCGTAACAT CAAAGACCTG CAGCTGGCCT TCAGCGAGTT CTACCTCAGC 
CTTATCCTCC TGCAGAACTA CCAGAATCTG AACTTCACCG GGTTCCGCAA GATCCTGAAG 
AAGCATGATA AGATTCTGGA CACTCCACGT GGAGCCGACT GGCGTGTGGC TCATGTGGAA 
GTGGCTCCGT TCTACACCTG TAAGAAGATC ACACAGCTCA TTTCCGAGAC CGAGGCTCTG 
GTGACCACTG AGCTGGAGGG AGGAGACCGT CAGAAGGCCA TGAAGAGGCT GAGGGTTCCT 
CCTCTGGGAG CAGCACAGCC TGCACCTGCA TGGACCACCT TTCGTGTGGG ACTGTATTGT 
GGTGTCTTCA TTGTCCTGGC TGTCGCCTTC GTCCTTACTG GTGCTTTTTT CGTTCGTAAG 
CAGAACATCT GGCCACTGGT GCGCATCTAC CGTGGAGGCT TCCTGCTCGT TCAGTTTCTC 
TTCCTCTTGG GGATCAACAC TTATGGCTGG AGGCAGGCGG GTGTCAATCA TGTGCTGATA 
TTTGAGCTGA ATCCTCGAAA CAATCTTTCA CATCAGCATC TGTTTGAGAT CGCAGGGTTT 
TTGGGGGTGT TGTGGTGTCT CAGCATCCTG TCCTGTCTGT TTGCTGACTA CACTTGGCTG 
CCTATGCAGG CCAATCCCCT CATCCTCTAC GGCTTCATGC TGCTGTTCCT CATCAACCCC 
TTCAAAACCG CCTACTACAA ATCCCGATTC TGGCTCATCA AACTGCTGTT CCGCGTGTTC 
ACCGCCCCGT TCCACCGAGT GGAGTTTGCA GATTTCTGGC TGGCAGATCA GCTCAATTCT 
CTGGTCATTG TGTTGTCGGA TCTGGAGTAT CTGGTGTGTT ACTACAGCAT GGAGCTGCAG 
TGGGGAGAAC GCAATGGATT ACTGCCCGCC AAATTTGGTG ATGAAAGGTG TAACAGCTTC 
TCGTATGGAG TACGAGCCAT CATCCACTGT CTGCCTGCCT GGCTGCGCTT CGTTCAGTGT 
CTGCGACGTT ATCGGGACAC CAGGAGAGCC TTCCCTCACC TGGTGAATGC TGGGAAATAC 
TCCACCACCT TCTTCGTGGT CACATTTGCA GCCCTTTACA GAACTCACAA AGATCAGAAC 
CATGCTGACT CCGAGGTGTT TTTCTACATG CTGGTGCTGT CTTCAATCGT CAGTTCTCTC 
TACACACTGA TCTGGGACCT GAAGATGGAC TGGGGGCTTT TCGACCGCAA CGCAGGCGAG 
AACACCTTCC TGAGAGAGGA GATCGTTTAC CCACATAAAG CCTACTACTA CTGTGCTATT 
ATAGAGGACG TGCTCCTGCG CTTCGCCTGG ACTCTGCAGA TCTCTCTGAC TTCCATGACT 
CGCATTCCTT CCATTGAGGA CATCGTGGTC ACTATTTTAG CTCCTCTAGA AGTGTTTAGG 
CGTTTTGTGT GGAACTTCTT CCGTCTGGAG AACGAGCACC TGAATAACTG TGGTGAGTTT 
CGTGCGGTGC GGGACATCTC TGTGGCTCCT CTAAATGCTG ATGACCAGAC GCTGCTGGAG 
CAGATGATGG ACCAGGAGGA TGGAGTCCGC AACAGACAGG GCAAGAAGAG CTGGAAACGC 
AGCTACAGCC TGTCCTTACG TCGACCTCTG CTGTCCTCTC AGTCCAAGAA GGACACTAAG 
GTGCTGATTG AGGATACGGA TGATGAGGCC TTCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001232029.1
CDS	153..2231
Translation	MKFAEHLSAHITPEWRKQYIQYEAFKEMLYAAQDQAPSLEVTDEDTVKRYYAKFEEKFFQTCEKELSKINTFYSEKLAEAQRRFATLQNELQTSLDAQRESNAPALRSRRKTVLPLSNKERNKHRNIKDLQLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILDTPRGADWRVAHVEVAPFYTCKKITQLISETEALVTTELEGGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLYCGVFIVLAVAFVLTGAFFVRKQNIWPLVRIYRGGFLLVQFLFLLGINTYGWRQAGVNHVLIFELNPRNNLSHQHLFEIAGFLGVLWCLSILSCLFADYTWLPMQANPLILYGFMLLFLINPFKTAYYKSRFWLIKLLFRVFTAPFHRVEFADFWLADQLNSLVIVLSDLEYLVCYYSMELQWGERNGLLPAKFGDERCNSFSYGVRAIIHCLPAWLRFVQCLRRYRDTRRAFPHLVNAGKYSTTFFVVTFAALYRTHKDQNHADSEVFFYMLVLSSIVSSLYTLIWDLKMDWGLFDRNAGENTFLREEIVYPHKAYYYCAIIEDVLLRFAWTLQISLTSMTRIPSIEDIVVTILAPLEVFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDQEDGVRNRQGKKSWKRSYSLSLRRPLLSSQSKKDTKVLIEDTDDEAFS

Target ORF information:

RefSeq Version	NM_001245100.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio xenotropic and polytropic retrovirus receptor 1a (xpr1a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001245100.1

ORF Insert Sequence:

ATGAAGTTTG CGGAGCACTT GTCCGCCCAT ATTACTCCAG AATGGAGGAA ACAGTACATT 
CAGTATGAGG CTTTCAAGGA GATGCTGTAT GCGGCCCAGG ATCAGGCCCC ATCCTTAGAA 
GTCACAGATG AGGACACCGT CAAACGATAC TATGCCAAGT TTGAAGAGAA GTTCTTTCAG 
ACGTGCGAAA AGGAGCTTTC CAAGATCAAC ACATTCTATT CAGAGAAACT GGCCGAGGCA 
CAGCGACGGT TTGCTACTTT GCAGAATGAG TTGCAGACGT CTCTTGATGC TCAGCGGGAG 
AGCAACGCTC CAGCCCTGCG CAGTCGCCGC AAAACTGTGC TCCCACTGTC CAACAAGGAG 
CGCAACAAAC ATCGTAACAT CAAAGACCTG CAGCTGGCCT TCAGCGAGTT CTACCTCAGC 
CTTATCCTCC TGCAGAACTA CCAGAATCTG AACTTCACCG GGTTCCGCAA GATCCTGAAG 
AAGCATGATA AGATTCTGGA CACTCCACGT GGAGCCGACT GGCGTGTGGC TCATGTGGAA 
GTGGCTCCGT TCTACACCTG TAAGAAGATC ACACAGCTCA TTTCCGAGAC CGAGGCTCTG 
GTGACCACTG AGCTGGAGGG AGGAGACCGT CAGAAGGCCA TGAAGAGGCT GAGGGTTCCT 
CCTCTGGGAG CAGCACAGCC TGCACCTGCA TGGACCACCT TTCGTGTGGG ACTGTATTGT 
GGTGTCTTCA TTGTCCTGGC TGTCGCCTTC GTCCTTACTG GTGCTTTTTT CGTTCGTAAG 
CAGAACATCT GGCCACTGGT GCGCATCTAC CGTGGAGGCT TCCTGCTCGT TCAGTTTCTC 
TTCCTCTTGG GGATCAACAC TTATGGCTGG AGGCAGGCGG GTGTCAATCA TGTGCTGATA 
TTTGAGCTGA ATCCTCGAAA CAATCTTTCA CATCAGCATC TGTTTGAGAT CGCAGGGTTT 
TTGGGGGTGT TGTGGTGTCT CAGCATCCTG TCCTGTCTGT TTGCTGACTA CACTTGGCTG 
CCTATGCAGG CCAATCCCCT CATCCTCTAC GGCTTCATGC TGCTGTTCCT CATCAACCCC 
TTCAAAACCG CCTACTACAA ATCCCGATTC TGGCTCATCA AACTGCTGTT CCGCGTGTTC 
ACCGCCCCGT TCCACCGAGT GGAGTTTGCA GATTTCTGGC TGGCAGATCA GCTCAATTCT 
CTGGTCATTG TGTTGTCGGA TCTGGAGTAT CTGGTGTGTT ACTACAGCAT GGAGCTGCAG 
TGGGGAGAAC GCAATGGATT ACTGCCCGCC AAATTTGGTG ATGAAAGGTG TAACAGCTTC 
TCGTATGGAG TACGAGCCAT CATCCACTGT CTGCCTGCCT GGCTGCGCTT CGTTCAGTGT 
CTGCGACGTT ATCGGGACAC CAGGAGAGCC TTCCCTCACC TGGTGAATGC TGGGAAATAC 
TCCACCACCT TCTTCGTGGT CACATTTGCA GCCCTTTACA GAACTCACAA AGATCAGAAC 
CATGCTGACT CCGAGGTGTT TTTCTACATG CTGGTGCTGT CTTCAATCGT CAGTTCTCTC 
TACACACTGA TCTGGGACCT GAAGATGGAC TGGGGGCTTT TCGACCGCAA CGCAGGCGAG 
AACACCTTCC TGAGAGAGGA GATCGTTTAC CCACATAAAG CCTACTACTA CTGTGCTATT 
ATAGAGGACG TGCTCCTGCG CTTCGCCTGG ACTCTGCAGA TCTCTCTGAC TTCCATGACT 
CGCATTCCTT CCATTGAGGA CATCGTGGTC ACTATTTTAG CTCCTCTAGA AGTGTTTAGG 
CGTTTTGTGT GGAACTTCTT CCGTCTGGAG AACGAGCACC TGAATAACTG TGGTGAGTTT 
CGTGCGGTGC GGGACATCTC TGTGGCTCCT CTAAATGCTG ATGACCAGAC GCTGCTGGAG 
CAGATGATGG ACCAGGAGGA TGGAGTCCGC AACAGACAGG GCAAGAAGAG CTGGAAACGC 
AGCTACAGCC TGTCCTTACG TCGACCTCTG CTGTCCTCTC AGTCCAAGAA GGACACTAAG 
GTGCTGATTG AGGATACGGA TGATGAGGCC TTCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Pla2g6 Deficiency in Zebrafish Leads to Dopaminergic Cell Death, Axonal Degeneration, Increased β-Synuclein Expression, and Defects in Brain Functions and Pathways.
Molecular neurobiology55(8)6734-6754(2018 Aug)
Sánchez E,Azcona LJ,Paisán-Ruiz C

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The phosphate exporter xpr1b is required for differentiation of tissue-resident macrophages.
Cell reports8(6)1659-1667(2014 Sep)
Meireles AM,Shiau CE,Guenther CA,Sidik H,Kingsley DM,Talbot WS

Reverse genetic analysis of neurogenesis in the zebrafish retina.
Developmental biology293(2)330-47(2006 May)
Pujic Z,Omori Y,Tsujikawa M,Thisse B,Thisse C,Malicki J

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xpr1a cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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