COL8A1 cDNA ORF clone, Bos taurus(cattle)

Gene
Clones
gRNAs

Summary

Gene Symbol	COL8A1
Entrez Gene ID	538564
Full Name	collagen type VIII alpha 1 chain
General protein information	Preferred Names collagen type VIII alpha 1 chain Names collagen alpha-1(VIII) chain alpha 1 type VIII collagen collagen, type VIII, alpha 1
Gene Type	protein-coding
Organism	Bos taurus(cattle)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001101176.1	NP_001094646.1	collagen alpha-1(VIII) chain precursor

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Col8a1	NP_031765.2
Gallus gallus (chicken)	COL8A1	XP_004938297.1
Macaca mulatta (Rhesus monkey)	COL8A1	XP_002802671.1
Bos taurus (cattle)	COL8A1	NP_001094646.1
Danio rerio (zebrafish)	col8a1b	XP_690914.3
Homo sapiens (human)	COL8A1	NP_001841.2
Pan troglodytes (chimpanzee)	COL8A1	XP_001142044.1
Rattus norvegicus (Norway rat)	Col8a1	NP_001100570.1
Xenopus tropicalis (tropical clawed frog)	col8a1	XP_002941034.1
Canis lupus familiaris (dog)	COL8A1	XP_545072.3

Gene Ontology
Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marçais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)

Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following COL8A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL8A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBa37548	NM_001101176.1 Latest version!	Bos taurus collagen type VIII alpha 1 chain (COL8A1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

COL8A1 ( NM_001101176.1 ) cDNA ORF clone, Bos taurus(cattle) -> NP_001094646.1 Bos taurus collagen type VIII alpha 1 chain (COL8A1), mRNA.

Price & Availability↑

CloneID	OBa37548
Clone ID Related Accession (Same CDS sequence)	NM_001101176.1
Accession Version	NM_001101176.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2238bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1526140800000
Organism	Bos taurus(cattle)
Product	collagen alpha-1(VIII) chain precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC151644.1. On Aug 14, 2007 this sequence version replaced XM_581154.3. ##Evidence-Data-START## Transcript exon combination :: BC151644.1, BT025430.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END##

ATGGCTGGAC CACCTTCCCC TCTGCAGCTG CTGGGAGTCC TGCTCACCCT TTCCGTGGGC 
TCCATCCGGC TCATCCACGC TGGTGCCTAC TATGGGATCA AGCCGCTACC ACCTCAAATT 
CCCGCTCAGA TCCCACCGCA AATTCCGCAA TACCAGCCCC TGGGCCAGCA AGTACCTCAT 
ATGCCTTTGG GCAAAGATGG CCTGAACGTG GGCAAGGAGC TGCCCCACAT GCAGTATGGC 
AAAGAGTATC CACACCTACC CCAATATAGG AAGGAAGTTC AGCCAGCACC GAGGATGGGC 
AAGGAAGCAG CACCCAAGAA AGGCAAAGAA ATACCATTAG CCAGTCTGCG AGGGGAGCAA 
GGTCCCCGTG GAGAGCCTGG CCCAAGAGGA CCACCTGGGC CCCCTGGTTT ACCAGGTCAG 
GGGATTCCTG GAGTCAAAGG AAAACCAGGA CCACAGGGGT ATCCAGGAAT TGGAAAGCCA 
GGTATGCCCG GAATGCCAGG AAAGCCAGGA GCCATGGGAA TGCCTGGGGC CAAAGGTGAA 
ATCGGACCCA AAGGGGAGAT AGGACCCATG GGGATCCCCG GGCCACAAGG GCCTCCAGGG 
CCTCACGGAC TTCCTGGCAT TGGGAAGCCA GGTGGGCCAG GGTTACCAGG GCAACCAGGT 
GCCAAAGGTG AGAGAGGACC CAAAGGACCA CCAGGCCCTC CAGGCCTTCA GGGTCCTAAA 
GGAGAGAAGG GCTTCGGGAT GCCAGGTCTG CCAGGCCTGA AGGGTCCTCC AGGGATGCAT 
GGGCCTCCTG GCCCTGTAGG ACTTCCAGGA GTAGGTAAGC CAGGAGTGAC AGGCTTCCCT 
GGGCCCCAGG GCCCCCTGGG AAAGCCAGGC CCTCCAGGAG AACCTGGGCC CCAAGGCCCT 
ATCGGGGTCC CAGGGGTTCA AGGACCTCCT GGGATACCTG GAATTGGCAA ACCGGGCCAG 
GATGGGATCC CTGGGCAGCC AGGATTTCCA GGTGGTAAAG GGGAGCAAGG CCTGCCAGGG 
CTACCAGGAC CCCCAGGCCT TCCAGGGGTC GGGAAACCAG GTTTCCCTGG ACCCAAAGGT 
GACAGGGGTG TTGGGGGTCT TCCTGGGCCT CTGGGACCAA GAGGGGAGAA AGGACCAGTA 
GGCGCTCCTG GACTGGGGGG TCCCCCAGGA GAGCCAGGCC TGCCTGGAAT CCCAGGTCCT 
ATGGGCCCTC CAGGTGCTAT CGGTTTTCCT GGACCCAAAG GAGAAGGTGG GGTTGTGGGG 
CCACAGGGGC CACCAGGACC AAAGGGTGAG CCAGGGCTCC AAGGCTTCCC AGGAAAGCCA 
GGCTTCCTTG GTGAAGTGGG GCCCCCCGGC ATGAGAGGCT TGCCAGGTCC CATAGGGCCC 
AAGGGGGAGG CTGGGCTCAA AGGCTTGCCA GGACTACCGG GTGCCCCAGG GCTGCTTGGA 
CCAAAGGGAG AGCCAGGAAT CCCAGGGGAG CAGGGTTTAC AGGGCCCCCC AGGCATCCCA 
GGGATTTCAG GCCCGAGTGG CCCCATTGGA CCACCTGGAA TTCCTGGCCC CAAAGGAGAA 
CCCGGTCTCC CAGGGCCCCC GGGGTTCCCT GGAGTAGGGA AGCCTGGAGT AGCAGGACTT 
CATGGCCCCC CGGGGAAGCC TGGTGCCCTC GGTCCCCAAG GCCAGCCTGG CCTTCCGGGA 
CCCCCAGGCC CTCCGGGGCC CCCAGGACCC CCAGCTGTGA TGCCCCCGAC ACCACCACCC 
CATGGAGAGT ACCTGCCAGA TATGGGGCTG GGAATCGAGG GAGCGAAACC CCCGCACGCC 
TACGGTGCTA AGAAAGGCAA GAATGGAGGA GGGCCGGCCT ACGAGATGCC CGCGTTCACC 
GCTGAGCTGA CGGCGCCTTT CCCGCCCGTG GGGGCCCCGG TGAAGTTCGA CAAACTGCTC 
TATAACGGCA GACAGAACTA CAACCCGCAG ACGGGCATCT TCACCTGCGA GGTCCCTGGG 
GTCTACTACT TTGTATACCA CGTTCACTGC AAGGGGGGCA ACGTGTGGGT TGCTCTGTTT 
AAGAACAACG AGCCCGTAAT GTACACGTAC GACGAGTACA AGAAGGGCTT CCTGGACCAG 
GCGTCCGGCA GCGCGGTGCT GCTGCTCCGG CCCGGAGACC GGGTGTTCCT GCAGATGCCC 
TCTGAACAGG CCGCGGGACT GTACGCCGGG CAGTACGTCC ACTCCTCTTT TTCAGGATAT 
TTATTGTATC CCATGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001094646.1
CDS	165..2402
Translation	MAGPPSPLQLLGVLLTLSVGSIRLIHAGAYYGIKPLPPQIPAQIPPQIPQYQPLGQQVPHMPLGKDGLNVGKELPHMQYGKEYPHLPQYRKEVQPAPRMGKEAAPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGLPGQGIPGVKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKGEIGPKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGPKGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGDRGVGGLPGPLGPRGEKGPVGAPGLGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGVVGPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGLKGLPGLPGAPGLLGPKGEPGIPGEQGLQGPPGIPGISGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPHGEYLPDMGLGIEGAKPPHAYGAKKGKNGGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGVYYFVYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPSEQAAGLYAGQYVHSSFSGYLLYPM

Target ORF information:

RefSeq Version	NM_001101176.1
Organism	Bos taurus(cattle)
Definition	Bos taurus collagen type VIII alpha 1 chain (COL8A1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001101176.1

ORF Insert Sequence:

ATGGCTGGAC CACCTTCCCC TCTGCAGCTG CTGGGAGTCC TGCTCACCCT TTCCGTGGGC 
TCCATCCGGC TCATCCACGC TGGTGCCTAC TATGGGATCA AGCCGCTACC ACCTCAAATT 
CCCGCTCAGA TCCCACCGCA AATTCCGCAA TACCAGCCCC TGGGCCAGCA AGTACCTCAT 
ATGCCTTTGG GCAAAGATGG CCTGAACGTG GGCAAGGAGC TGCCCCACAT GCAGTATGGC 
AAAGAGTATC CACACCTACC CCAATATAGG AAGGAAGTTC AGCCAGCACC GAGGATGGGC 
AAGGAAGCAG CACCCAAGAA AGGCAAAGAA ATACCATTAG CCAGTCTGCG AGGGGAGCAA 
GGTCCCCGTG GAGAGCCTGG CCCAAGAGGA CCACCTGGGC CCCCTGGTTT ACCAGGTCAG 
GGGATTCCTG GAGTCAAAGG AAAACCAGGA CCACAGGGGT ATCCAGGAAT TGGAAAGCCA 
GGTATGCCCG GAATGCCAGG AAAGCCAGGA GCCATGGGAA TGCCTGGGGC CAAAGGTGAA 
ATCGGACCCA AAGGGGAGAT AGGACCCATG GGGATCCCCG GGCCACAAGG GCCTCCAGGG 
CCTCACGGAC TTCCTGGCAT TGGGAAGCCA GGTGGGCCAG GGTTACCAGG GCAACCAGGT 
GCCAAAGGTG AGAGAGGACC CAAAGGACCA CCAGGCCCTC CAGGCCTTCA GGGTCCTAAA 
GGAGAGAAGG GCTTCGGGAT GCCAGGTCTG CCAGGCCTGA AGGGTCCTCC AGGGATGCAT 
GGGCCTCCTG GCCCTGTAGG ACTTCCAGGA GTAGGTAAGC CAGGAGTGAC AGGCTTCCCT 
GGGCCCCAGG GCCCCCTGGG AAAGCCAGGC CCTCCAGGAG AACCTGGGCC CCAAGGCCCT 
ATCGGGGTCC CAGGGGTTCA AGGACCTCCT GGGATACCTG GAATTGGCAA ACCGGGCCAG 
GATGGGATCC CTGGGCAGCC AGGATTTCCA GGTGGTAAAG GGGAGCAAGG CCTGCCAGGG 
CTACCAGGAC CCCCAGGCCT TCCAGGGGTC GGGAAACCAG GTTTCCCTGG ACCCAAAGGT 
GACAGGGGTG TTGGGGGTCT TCCTGGGCCT CTGGGACCAA GAGGGGAGAA AGGACCAGTA 
GGCGCTCCTG GACTGGGGGG TCCCCCAGGA GAGCCAGGCC TGCCTGGAAT CCCAGGTCCT 
ATGGGCCCTC CAGGTGCTAT CGGTTTTCCT GGACCCAAAG GAGAAGGTGG GGTTGTGGGG 
CCACAGGGGC CACCAGGACC AAAGGGTGAG CCAGGGCTCC AAGGCTTCCC AGGAAAGCCA 
GGCTTCCTTG GTGAAGTGGG GCCCCCCGGC ATGAGAGGCT TGCCAGGTCC CATAGGGCCC 
AAGGGGGAGG CTGGGCTCAA AGGCTTGCCA GGACTACCGG GTGCCCCAGG GCTGCTTGGA 
CCAAAGGGAG AGCCAGGAAT CCCAGGGGAG CAGGGTTTAC AGGGCCCCCC AGGCATCCCA 
GGGATTTCAG GCCCGAGTGG CCCCATTGGA CCACCTGGAA TTCCTGGCCC CAAAGGAGAA 
CCCGGTCTCC CAGGGCCCCC GGGGTTCCCT GGAGTAGGGA AGCCTGGAGT AGCAGGACTT 
CATGGCCCCC CGGGGAAGCC TGGTGCCCTC GGTCCCCAAG GCCAGCCTGG CCTTCCGGGA 
CCCCCAGGCC CTCCGGGGCC CCCAGGACCC CCAGCTGTGA TGCCCCCGAC ACCACCACCC 
CATGGAGAGT ACCTGCCAGA TATGGGGCTG GGAATCGAGG GAGCGAAACC CCCGCACGCC 
TACGGTGCTA AGAAAGGCAA GAATGGAGGA GGGCCGGCCT ACGAGATGCC CGCGTTCACC 
GCTGAGCTGA CGGCGCCTTT CCCGCCCGTG GGGGCCCCGG TGAAGTTCGA CAAACTGCTC 
TATAACGGCA GACAGAACTA CAACCCGCAG ACGGGCATCT TCACCTGCGA GGTCCCTGGG 
GTCTACTACT TTGTATACCA CGTTCACTGC AAGGGGGGCA ACGTGTGGGT TGCTCTGTTT 
AAGAACAACG AGCCCGTAAT GTACACGTAC GACGAGTACA AGAAGGGCTT CCTGGACCAG 
GCGTCCGGCA GCGCGGTGCT GCTGCTCCGG CCCGGAGACC GGGTGTTCCT GCAGATGCCC 
TCTGAACAGG CCGCGGGACT GTACGCCGGG CAGTACGTCC ACTCCTCTTT TTCAGGATAT 
TTATTGTATC CCATGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Marçais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL

Characterization of 954 bovine full-CDS cDNA sequences.
BMC genomics6166(2005 Nov)
Harhay GP,Sonstegard TS,Keele JW,Heaton MP,Clawson ML,Snelling WM,Wiedmann RT,Van Tassell CP,Smith TP

Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Genome research11(4)626-30(2001 Apr)
Smith TP,Grosse WM,Freking BA,Roberts AJ,Stone RT,Casas E,Wray JE,White J,Cho J,Fahrenkrug SC,Bennett GL,Heaton MP,Laegreid WW,Rohrer GA,Chitko-McKown CG,Pertea G,Holt I,Karamycheva S,Liang F,Quackenbush J,Keele JW

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COL8A1 cDNA ORF clone, Bos taurus(cattle)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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