| Gene Symbol | TIDP3513 |
| Entrez Gene ID | 100383209 |
| Full Name | Valine--tRNA ligase mitochondrial 1 |
| Synonyms | GRMZM2G117870 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » TIDP3513 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| NM_001175871.2 | NP_001169342.1 | Valine--tRNA ligase mitochondrial 1 |
| NM_001361957.1 | NP_001348886.1 | uncharacterized protein LOC100383209 |
| XM_008670165.2 | XP_008668387.1 | valine--tRNA ligase mitochondrial 1 isoform X1 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TIDP3513 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TIDP3513 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa15998 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001175871.2 | |
| Accession Version | NM_001175871.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1495382400000 | |
| Organism | Zea mays | |
| Product | Valine--tRNA ligase mitochondrial 1 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT066592.1. On Aug 16, 2014 this sequence version replaced NM_001175871.1. ##Evidence-Data-START## Transcript exon combination :: BT066592.1, SRR3147022.9137.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## | |
1 | ATGGTGATGA TGGGAATGCA ACTTGGTGGT GATGTGCCAT TTCAGAAGGT TTATTTACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001169342.1 |
| CDS | 171..1469 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001175871.2 |
1 | ATGGTGATGA TGGGAATGCA ACTTGGTGGT GATGTGCCAT TTCAGAAGGT TTATTTACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa30475 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001361957.1 , XM_008670165.2 | |
| Accession Version | NM_001361957.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3171bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1557936000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100383209 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FL083880.1, LPUQ01002979.1, GECR01002975.1, GECS01005172.1, DN218341.1 and BT066592.1. On Mar 31, 2018 this sequence version replaced XM_008670165.2. ##Evidence-Data-START## Transcript exon combination :: SRR3147024.25267.1, SRR3147030.261.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## | |
1 | ATGGACAAGC AATCTGATGG GCAGGGGGTG GAGAGGGTTG CTGAGGAGAA GCAACTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001348886.1 |
| CDS | 360..3530 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001361957.1 |
1 | ATGGACAAGC AATCTGATGG GCAGGGGGTG GAGAGGGTTG CTGAGGAGAA GCAACTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa30475 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001361957.1 , XM_008670165.2 | |
| Accession Version | XM_008670165.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3171bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | valine--tRNA ligase mitochondrial 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008670165.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGACAAGC AATCTGATGG GCAGGGGGTG GAGAGGGTTG CTGAGGAGAA GCAACTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668387.1 |
| CDS | 423..3593 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008670165.2 |
1 | ATGGACAAGC AATCTGATGG GCAGGGGGTG GAGAGGGTTG CTGAGGAGAA GCAACTTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Insights into corn genes derived from large-scale cDNA sequencing. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |