| Gene Symbol | HKT1 |
| Entrez Gene ID | 100382359 |
| Full Name | Sodium transporter HKT1 |
| Synonyms | GRMZM2G047616 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » HKT1 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| XM_008674901.3 | XP_008673123.1 | uncharacterized protein LOC100382359 isoform X1 |
| NM_001175105.1 | NP_001168576.1 | uncharacterized protein LOC100382359 |
| XM_008674901.2 | XP_008673123.1 | uncharacterized protein LOC100382359 isoform X1 |
Natural variation of ZmHKT1 affects root morphology in maize at the seedling stage.
Li P, Pan T, Wang H, Wei J, Chen M, Hu X, Zhao Y, Yang X, Yin S, Xu Y, Fang H, Liu J, Xu C, Yang Z
Planta249(3)879-889(2019 Mar)
A retrotransposon in an HKT1 family sodium transporter causes variation of leaf Na
Zhang M, Cao Y, Wang Z, Wang ZQ, Shi J, Liang X, Song W, Chen Q, Lai J, Jiang C
The New phytologist217(3)1161-1176(2018 02)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HKT1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HKT1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa16799 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001175105.1 | |
| Accession Version | NM_001175105.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1570204800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100382359 | |
| Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BT064033.1. ##Evidence-Data-START## Transcript exon combination :: BT064033.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03135401, SAMN03135417 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCTGAGAG TCCTGCCCAT GAAGTCCAGC TCCGTGCCTA GGCCCTCGGC TCTGGACCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001168576.1 |
| CDS | 79..1482 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001175105.1 |
1 | ATGCTGAGAG TCCTGCCCAT GAAGTCCAGC TCCGTGCCTA GGCCCTCGGC TCTGGACCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa30247 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008674901.3 , XM_008674901.2 | |
| Accession Version | XM_008674901.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1608bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100382359 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008674901.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCCCCTT TGCACGTCCC CGGTAGTAGT ACTCCTCGCA AGTTCTATCA CCTGGTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008673123.1 |
| CDS | 91..1698 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008674901.3 |
1 | ATGCCCCCTT TGCACGTCCC CGGTAGTAGT ACTCCTCGCA AGTTCTATCA CCTGGTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa30247 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008674901.3 , XM_008674901.2 | |
| Accession Version | XM_008674901.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1608bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100382359 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008674901.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCCCCTT TGCACGTCCC CGGTAGTAGT ACTCCTCGCA AGTTCTATCA CCTGGTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008673123.1 |
| CDS | 92..1699 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008674901.2 |
1 | ATGCCCCCTT TGCACGTCCC CGGTAGTAGT ACTCCTCGCA AGTTCTATCA CCTGGTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Natural variation of ZmHKT1 affects root morphology in maize at the seedling stage. |
A retrotransposon in an HKT1 family sodium transporter causes variation of leaf Na |