| Gene Symbol | AGA |
| Entrez Gene ID | 100248608 |
| Full Name | alpha-galactosidase |
| Synonyms | SIP1 |
| Gene Type | protein-coding |
| Organism | Vitis vinifera(wine grape) |
IVD Raw Materials
ORF » Species Summary » Vitis vinifera » AGA cDNA ORF clone
| Gene Symbol | AGA |
| Entrez Gene ID | 100248608 |
| Full Name | alpha-galactosidase |
| Synonyms | SIP1 |
| Gene Type | protein-coding |
| Organism | Vitis vinifera(wine grape) |
| mRNA | Protein | Name |
|---|---|---|
| XM_010655434.2 | XP_010653736.1 | alpha-galactosidase isoform X1 |
| NM_001280975.1 | NP_001267904.1 | alpha-galactosidase |
| XM_010655433.2 | XP_010653735.1 | alpha-galactosidase isoform X1 |
| XM_010655435.2 | XP_010653737.1 | alpha-galactosidase isoform X1 |
The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.
Da Silva C, Zamperin G, Ferrarini A, Minio A, Dal Molin A, Venturini L, Buson G, Tononi P, Avanzato C, Zago E, Boido E, Dellacassa E, Gaggero C, Pezzotti M, Carrau F, Delledonne M
The Plant cell25(12)4777-88(2013 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following AGA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AGA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OVa22784 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001280975.1 | |
| Accession Version | NM_001280975.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2325bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1556899200000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | alpha-galactosidase | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU543561.1. On Jul 24, 2013 this sequence version replaced XM_002283617.2. ##Evidence-Data-START## Transcript exon combination :: EU543561.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3598469, SAMEA3598470 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001267904.1 |
| CDS | 198..2522 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001280975.1 |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa26079 | |
| Clone ID Related Accession (Same CDS sequence) | XM_010655434.2 , XM_010655433.2 , XM_010655435.2 | |
| Accession Version | XM_010655434.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2325bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479916800000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | alpha-galactosidase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012014.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 25, 2016 this sequence version replaced XM_010655434.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_010653736.1 |
| CDS | 38..2362 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_010655434.2 |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa26079 | |
| Clone ID Related Accession (Same CDS sequence) | XM_010655434.2 , XM_010655433.2 , XM_010655435.2 | |
| Accession Version | XM_010655433.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2325bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479916800000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | alpha-galactosidase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012014.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 25, 2016 this sequence version replaced XM_010655433.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_010653735.1 |
| CDS | 209..2533 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_010655433.2 |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa26079 | |
| Clone ID Related Accession (Same CDS sequence) | XM_010655434.2 , XM_010655433.2 , XM_010655435.2 | |
| Accession Version | XM_010655435.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2325bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479916800000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | alpha-galactosidase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012014.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 25, 2016 this sequence version replaced XM_010655435.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_010653737.1 |
| CDS | 296..2620 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_010655435.2 |
1 | ATGACGGTTA CACCGAAGAT CTCTATCAAC GAGGGTAACC TTGTGGTTCA GGGGAAGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. |