THAPSDRAFT_11076 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_11076 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_11076 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf07507 XM_002296954.1
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Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OTf07507
    Clone ID Related Accession (Same CDS sequence) XM_002296954.1
    Accession Version XM_002296954.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3876bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_002243508). COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    ATGCGTCTAC CATCCGTAGT CCTCTTGGGA ATCTACCTCA TCACCAGTGA TGCATTCGTC 
    ACCAACCTTC CTCACCAGCG AGCTCTCCTC ACACGAGAAG TCAACAGCAA ACAATTCATT
    TCAACCTCTT CCGATGAAAA GGTCCTCGCC GAAGCCAATG AGTTGTTGAA AGCAATGCCT
    CCCTCCTCGT CCGTTGCACC ACCTGCACCC GGCTCGAGTT CCCTGTCTCA TCTCTGCCCC
    TTCAATAAAA TCATGGCAGC CAATAGGGGT GAGATCGCAG TCCGTATTGA TAGAGCAGCA
    ACCGAATTGA ACCTCAAAAC TGCCTCCATC TACGCCTACG AAGATCGCAA CAGTGCTCAT
    CGTTGGGATT CTGATGAGTC CTTCTTGTTA CCTGCCAGTG GTACTCCGGT AGGTGCTTAT
    TTGAACATCA CTAACATCAT CAACATTGCC AAAGAGAATG GAGTGGATGC AATTCATCCC
    GGATATGGTT TCTTGTCCGA GAGTGCAGAA TTTGCTCAGG CTTGTGAAGA TAACGGAATC
    ACTTTCGTTG GACCTTCTGT AGAGAACTTG GTCACCTTTG GAGACAAAAC CAAAGCACGA
    GAGCTCGCCA TCAAAGCTGA CGTTTCTGTC GTCCCTGGAA CGTCTGAACC TCTCACTACA
    ACTGAAGCAG CTGTAGCGTT TGTGGAAGAG TACGGCCTTC CCGTCATCAT CAAGGCAGCG
    AAAGGAGGTG GAGGAAAGGG AATGCGAGTG GTCAACAAGA AAGAAGACTT GATCCCTCTC
    TTTGAAGCAG CGTCTTCTGA AGCACTCGCC TCGTTTGGAG ATGGAGGATG CTTCGTTGAA
    CGGTATGTTA CTAACGCCAA GCACGTTGAA GTACAAGTTA TTGGTGATGG AAAAGGAAAC
    GTCGTTCATC TTTGGGAACG TGACTGCTCT GTACAACGTC GCCATCAAAA GATTGTCGAG
    ATTGCTCCTG CCGTCCACCA TTCCATGGAA GTACGCAAAG CTGTGTTGGA AGATGCATTG
    AAGATTACCA AGGCTTGTAA CTACAAGAAC GCAGGTACTG TCGAGTTTTT AGTCGATGAT
    CAGGGACGTC ATTACTTCAT GGAGGTGAAT CCTCGTGTTC AGGTAGAGCA TACTGTTACC
    GAGCAAGTCA CTGGAGTTGA TATTGTTCAA AGCACTTTCT TGATTGCTGG TGGAGCTTCC
    CTTGAAGATA TTGGCCTCGT GCAAGAGAAC ATCATTCCTC GCGGCGTTGC TATGCAATGC
    CGTATTACTA CCGAAGATCC TGCGAGAGAC TTCGCACCAG ACACCGGTAT GCTCGACGTT
    TGTAGGCACA GTGTAGGACC AGGCATTCGT GTCGACGGCT ATGCTTACCC TGGCATGGTG
    GTGCAGCCTT ACTTTGATAG TCTCCTCGTC AAGTATACTG CCAGTCACAA GGATTGGGAT
    GGAGCAATTA GGAGAATGAG ACGTGCCTTG CGAGAGAATC ACATCCGCGG AGTCAAGACA
    AACATTCCAT TTCTCCTTAA TGTCATGGAT CATCCTGATT TCATCGCCGG AAGCTTTGAT
    CTCAACTTCA TCCAAGACAA TCCAGAGCTA CTTCTGAATC TACCAGGAAC TCTCTCGGCT
    CATGAAGTCC AAACGGAAGG AACTGTTGGT CAAAAGTACG ATCACATCGA AGGATACTTG
    AAGTACATTG CCAACCTCGC AGTCAACGGA CATCCTAAAT CACTCGGAGC TGATCCTACT
    CTTGTACGAA CTCTAAGCAA TAATGATGTC CCTGCACCAA AGAGTAGTGC AATTAGCGAC
    ATCTTGGAAC ATAAGAAGGA ACTCTTCGGA GATACAATAA CAGCTCCTCG TTGGAGGAAG
    ATTCTTCGGG AACAAGGTCC AAAGGCACTG GCAAAGGCCG TCAGAGATCA CCAAAATGTA
    CTTGTGACGG ATACAACGTG GAGAGACGCA CACCAAAGTC TACTCGCAAC TAGAATGAGA
    ACTGCCGATC TCCTGAAGGC AGCCGAGGCT ACCAACACTG CATTTAATGG TACTTCCGAC
    GTCTTCTCAC TGGAGATGTG GGGTGGAGCA ACCTTTGACG TGTCTATGAA CTTCCTGCGT
    GAGTGTCCAT GGAAGCGACT GGAGGAACTA CGTGAAGCAG CACCTGATAT GCTCTTCCAG
    ATGCTACTTC GCGGTGCCAA TGCCGTTGGA TACACGGTCT ACCCCGACAA TGTGGTGTAC
    GAGTTTTGCA AGCAGGCATA TAAAAGTGGA AATGACATCT TCCGTGTCTT TGACTCTCTC
    AACTACGTCG ACAATATGGA ACTTGGTATC AAGGCAGCAG CTGCGTCTGG TGGATTCGTA
    GAAGCGGCCA TCTGCTACAC GGGAGATGTA ACGTCGAGTG ATCCAAGCAA CAAGTACAAT
    TTGAAGTACT ACCTTGACTT TGCAACTCAG CTCGTTGATC TCGGTGCTCA TGCATTGGCA
    ATCAAGGATA TGGCAGGTCT CTTGACTCCA CGAGCAGCTA CGTTGCTCGT CTCTGAGCTG
    CGTAGTGCAT TCCCAGACGT TCCGATACAC TTGCACACTC ACGACACGGC AGGAATGGGA
    GTCGCTGCCA TGTTTGCTGG CGCCGAGGCT GGAGCAGACA TCGTCGATGG AGCCATTGAT
    GCAATGTCAG GCTTGAGCTC TCAACCATGC CTTGGAGCTC TTGTTTCTGC CCTGGGTGAT
    AAGAGCAACG TTGATCTTGA TGCACTCCAA GTGTTGAATG AGTACTGGGA AAGCGTACGT
    CATCAGTACA ATCCGTTTGA AGTTCAGGCA CTCAACGCTG CAATCGGTTC CAACGTGTAC
    AAGCACGAGA TTCCAGGTGG ACAGTACACC AATCTTCTGT TCCAGTCGAA GCAGTTGGGG
    TTGTCAGGTC GCTTTGCTGA AGTGAAGAAA GCCTATGCAC TCGCCAACAA GTTGCTTGGC
    GACATTCCGA AAGTCACACC TTCCTCTAAG ACGGTTGGAG ACTTGGCTCA GTTCATTGTT
    GGTTTGAAGA TATCAGGTGA TGAGTTGGTG GAGAATGCAG CTACACTTCC ACTGCCAAAT
    AGTGTCGTGG AGTACATGCA AGGTGCGTTG GGACCTCCCC CCGGTGGATA TCCTGAGCCA
    TTTCGTACGA ATGTGCTTAA AGGAAGGCCA TTAAAGGATG GACGATCAAT GTTTACTGCC
    AGACCTGGTG CCGAGTTGCC TGACTATGAT TTCGTTGAAG CGGAGAAGAA TCTGAAGGAG
    GCGTACGGAA ACTCAAGAAT TGGTTTCAAG GAAGTTCTAT CTCATGCAAT GTATCCTCAA
    GTGTTCAAGG ACTACCTCGC CTTTGAGAAA GTCTACGGTG ACGTTGAAAA GCTTCCTACC
    CACATGTTCT TGCGACCGAT GACCGTCGGT GAAGAATCTC ATTTGCATTT AGGCCCTGGA
    AAAGACTACT ACATCCGCCT CGCGGCAATA GATCAGTTTG ATGAGGATCT TGGGACAAGG
    ACGGTTACAT TGGAGGTCAA TGGAGAGAAG TGGTTCATCC GAACTCCCGA TACTGTAACT
    ACGTTGGAAA GTGCAACTGC CGGTGGACCT GCACCCAAGA GGAGAGAAAA GAAGGATCCC
    ACTGAAAAGG GATCGATCGG CACACCAATG CCTGGCCAGA TCGTCGCAGT GAATGTGGAA
    GAGGGCGACG AGGTGAAGGA AGGCCAAACA CTGTTCAAGC TTAGTGCGAT GAAGATGGAG
    ACAGAGATCA AAACTCCCAT TTCTGGAAGA GTGACACGAG TTCTTGTTGT AGAGAATGAT
    ACCGTAGAGT CAGATCACTT GCTTGCTGAG GTGTTATCAG AGCAATTAGG TTTGCGTAAA
    GCGAAGACTT TACCCGATAG TCTTTCAATT GGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002296990.1
    CDS1..3876
    Translation

    Target ORF information:

    RefSeq Version XM_002296954.1
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002296954.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    ATGCGTCTAC CATCCGTAGT CCTCTTGGGA ATCTACCTCA TCACCAGTGA TGCATTCGTC 
    ACCAACCTTC CTCACCAGCG AGCTCTCCTC ACACGAGAAG TCAACAGCAA ACAATTCATT
    TCAACCTCTT CCGATGAAAA GGTCCTCGCC GAAGCCAATG AGTTGTTGAA AGCAATGCCT
    CCCTCCTCGT CCGTTGCACC ACCTGCACCC GGCTCGAGTT CCCTGTCTCA TCTCTGCCCC
    TTCAATAAAA TCATGGCAGC CAATAGGGGT GAGATCGCAG TCCGTATTGA TAGAGCAGCA
    ACCGAATTGA ACCTCAAAAC TGCCTCCATC TACGCCTACG AAGATCGCAA CAGTGCTCAT
    CGTTGGGATT CTGATGAGTC CTTCTTGTTA CCTGCCAGTG GTACTCCGGT AGGTGCTTAT
    TTGAACATCA CTAACATCAT CAACATTGCC AAAGAGAATG GAGTGGATGC AATTCATCCC
    GGATATGGTT TCTTGTCCGA GAGTGCAGAA TTTGCTCAGG CTTGTGAAGA TAACGGAATC
    ACTTTCGTTG GACCTTCTGT AGAGAACTTG GTCACCTTTG GAGACAAAAC CAAAGCACGA
    GAGCTCGCCA TCAAAGCTGA CGTTTCTGTC GTCCCTGGAA CGTCTGAACC TCTCACTACA
    ACTGAAGCAG CTGTAGCGTT TGTGGAAGAG TACGGCCTTC CCGTCATCAT CAAGGCAGCG
    AAAGGAGGTG GAGGAAAGGG AATGCGAGTG GTCAACAAGA AAGAAGACTT GATCCCTCTC
    TTTGAAGCAG CGTCTTCTGA AGCACTCGCC TCGTTTGGAG ATGGAGGATG CTTCGTTGAA
    CGGTATGTTA CTAACGCCAA GCACGTTGAA GTACAAGTTA TTGGTGATGG AAAAGGAAAC
    GTCGTTCATC TTTGGGAACG TGACTGCTCT GTACAACGTC GCCATCAAAA GATTGTCGAG
    ATTGCTCCTG CCGTCCACCA TTCCATGGAA GTACGCAAAG CTGTGTTGGA AGATGCATTG
    AAGATTACCA AGGCTTGTAA CTACAAGAAC GCAGGTACTG TCGAGTTTTT AGTCGATGAT
    CAGGGACGTC ATTACTTCAT GGAGGTGAAT CCTCGTGTTC AGGTAGAGCA TACTGTTACC
    GAGCAAGTCA CTGGAGTTGA TATTGTTCAA AGCACTTTCT TGATTGCTGG TGGAGCTTCC
    CTTGAAGATA TTGGCCTCGT GCAAGAGAAC ATCATTCCTC GCGGCGTTGC TATGCAATGC
    CGTATTACTA CCGAAGATCC TGCGAGAGAC TTCGCACCAG ACACCGGTAT GCTCGACGTT
    TGTAGGCACA GTGTAGGACC AGGCATTCGT GTCGACGGCT ATGCTTACCC TGGCATGGTG
    GTGCAGCCTT ACTTTGATAG TCTCCTCGTC AAGTATACTG CCAGTCACAA GGATTGGGAT
    GGAGCAATTA GGAGAATGAG ACGTGCCTTG CGAGAGAATC ACATCCGCGG AGTCAAGACA
    AACATTCCAT TTCTCCTTAA TGTCATGGAT CATCCTGATT TCATCGCCGG AAGCTTTGAT
    CTCAACTTCA TCCAAGACAA TCCAGAGCTA CTTCTGAATC TACCAGGAAC TCTCTCGGCT
    CATGAAGTCC AAACGGAAGG AACTGTTGGT CAAAAGTACG ATCACATCGA AGGATACTTG
    AAGTACATTG CCAACCTCGC AGTCAACGGA CATCCTAAAT CACTCGGAGC TGATCCTACT
    CTTGTACGAA CTCTAAGCAA TAATGATGTC CCTGCACCAA AGAGTAGTGC AATTAGCGAC
    ATCTTGGAAC ATAAGAAGGA ACTCTTCGGA GATACAATAA CAGCTCCTCG TTGGAGGAAG
    ATTCTTCGGG AACAAGGTCC AAAGGCACTG GCAAAGGCCG TCAGAGATCA CCAAAATGTA
    CTTGTGACGG ATACAACGTG GAGAGACGCA CACCAAAGTC TACTCGCAAC TAGAATGAGA
    ACTGCCGATC TCCTGAAGGC AGCCGAGGCT ACCAACACTG CATTTAATGG TACTTCCGAC
    GTCTTCTCAC TGGAGATGTG GGGTGGAGCA ACCTTTGACG TGTCTATGAA CTTCCTGCGT
    GAGTGTCCAT GGAAGCGACT GGAGGAACTA CGTGAAGCAG CACCTGATAT GCTCTTCCAG
    ATGCTACTTC GCGGTGCCAA TGCCGTTGGA TACACGGTCT ACCCCGACAA TGTGGTGTAC
    GAGTTTTGCA AGCAGGCATA TAAAAGTGGA AATGACATCT TCCGTGTCTT TGACTCTCTC
    AACTACGTCG ACAATATGGA ACTTGGTATC AAGGCAGCAG CTGCGTCTGG TGGATTCGTA
    GAAGCGGCCA TCTGCTACAC GGGAGATGTA ACGTCGAGTG ATCCAAGCAA CAAGTACAAT
    TTGAAGTACT ACCTTGACTT TGCAACTCAG CTCGTTGATC TCGGTGCTCA TGCATTGGCA
    ATCAAGGATA TGGCAGGTCT CTTGACTCCA CGAGCAGCTA CGTTGCTCGT CTCTGAGCTG
    CGTAGTGCAT TCCCAGACGT TCCGATACAC TTGCACACTC ACGACACGGC AGGAATGGGA
    GTCGCTGCCA TGTTTGCTGG CGCCGAGGCT GGAGCAGACA TCGTCGATGG AGCCATTGAT
    GCAATGTCAG GCTTGAGCTC TCAACCATGC CTTGGAGCTC TTGTTTCTGC CCTGGGTGAT
    AAGAGCAACG TTGATCTTGA TGCACTCCAA GTGTTGAATG AGTACTGGGA AAGCGTACGT
    CATCAGTACA ATCCGTTTGA AGTTCAGGCA CTCAACGCTG CAATCGGTTC CAACGTGTAC
    AAGCACGAGA TTCCAGGTGG ACAGTACACC AATCTTCTGT TCCAGTCGAA GCAGTTGGGG
    TTGTCAGGTC GCTTTGCTGA AGTGAAGAAA GCCTATGCAC TCGCCAACAA GTTGCTTGGC
    GACATTCCGA AAGTCACACC TTCCTCTAAG ACGGTTGGAG ACTTGGCTCA GTTCATTGTT
    GGTTTGAAGA TATCAGGTGA TGAGTTGGTG GAGAATGCAG CTACACTTCC ACTGCCAAAT
    AGTGTCGTGG AGTACATGCA AGGTGCGTTG GGACCTCCCC CCGGTGGATA TCCTGAGCCA
    TTTCGTACGA ATGTGCTTAA AGGAAGGCCA TTAAAGGATG GACGATCAAT GTTTACTGCC
    AGACCTGGTG CCGAGTTGCC TGACTATGAT TTCGTTGAAG CGGAGAAGAA TCTGAAGGAG
    GCGTACGGAA ACTCAAGAAT TGGTTTCAAG GAAGTTCTAT CTCATGCAAT GTATCCTCAA
    GTGTTCAAGG ACTACCTCGC CTTTGAGAAA GTCTACGGTG ACGTTGAAAA GCTTCCTACC
    CACATGTTCT TGCGACCGAT GACCGTCGGT GAAGAATCTC ATTTGCATTT AGGCCCTGGA
    AAAGACTACT ACATCCGCCT CGCGGCAATA GATCAGTTTG ATGAGGATCT TGGGACAAGG
    ACGGTTACAT TGGAGGTCAA TGGAGAGAAG TGGTTCATCC GAACTCCCGA TACTGTAACT
    ACGTTGGAAA GTGCAACTGC CGGTGGACCT GCACCCAAGA GGAGAGAAAA GAAGGATCCC
    ACTGAAAAGG GATCGATCGG CACACCAATG CCTGGCCAGA TCGTCGCAGT GAATGTGGAA
    GAGGGCGACG AGGTGAAGGA AGGCCAAACA CTGTTCAAGC TTAGTGCGAT GAAGATGGAG
    ACAGAGATCA AAACTCCCAT TTCTGGAAGA GTGACACGAG TTCTTGTTGT AGAGAATGAT
    ACCGTAGAGT CAGATCACTT GCTTGCTGAG GTGTTATCAG AGCAATTAGG TTTGCGTAAA
    GCGAAGACTT TACCCGATAG TCTTTCAATT GGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS