Aff1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Aff1
Entrez Gene ID	305152
Full Name	AF4/FMR2 family, member 1
Synonyms	Mllt2
General protein information	Preferred Names AF4/FMR2 family, member 1 Names AF4/FMR2 family member 1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 2 translocated to, 2
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 14 Map Location: 14p22

mRNA and Protein(s)

mRNA	Protein	Name
NM_001107206.1	NP_001100676.1	AF4/FMR2 family member 1
XM_006250632.3	XP_006250694.1	AF4/FMR2 family member 1 isoform X1
XM_006250633.3	XP_006250695.1	AF4/FMR2 family member 1 isoform X2

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	AFF1	XP_001156948.2
Mus musculus (house mouse)	Aff1	NP_598680.3
Gallus gallus (chicken)	AFF1	XP_004941157.1
Homo sapiens (human)	AFF1	NP_001160165.1
Macaca mulatta (Rhesus monkey)	AFF1	XP_001095677.2
Bos taurus (cattle)	AFF1	NP_001178454.1
Canis lupus familiaris (dog)	AFF1	XP_005639216.1
Rattus norvegicus (Norway rat)	Aff1	NP_001100676.1

Gene Ontology
Bibliography

Related articles in PubMed

The super elongation complex (SEC) family in transcriptional control.
Luo Z, Lin C, Shilatifard A
Nature reviews. Molecular cell biology13(9)543-7(2012 Sep)

The little elongation complex regulates small nuclear RNA transcription.
Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP, Eissenberg JC, Shilatifard A
Molecular cell44(6)954-65(2011 Dec)

Cloning and developmental expression of the murine homolog of the acute leukemia proto-oncogene AF4.
Baskaran K, Erfurth F, Taborn G, Copeland NG, Gilbert DJ, Jenkins NA, Iannaccone PM, Domer PH
Oncogene15(16)1967-78(1997 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Aff1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Aff1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa11141	NM_001107206.1 Latest version!	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00
ORa35837	XM_006250632.3 Latest version!	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00
ORa35838	XM_006250633.3 Latest version!	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Aff1 ( NM_001107206.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001100676.1 Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), mRNA.

Price & Availability↑

CloneID	ORa11141
Clone ID Related Accession (Same CDS sequence)	NM_001107206.1
Accession Version	NM_001107206.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3513bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1527350400000
Organism	Rattus norvegicus(Norway rat)
Product	AF4/FMR2 family member 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH474022.1. On or before Oct 4, 2007 this sequence version replaced XM_223161.4, XM_001065599.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGGAAACTA AAATTCGCCC TGGAGAGAGA GGGAAATTTG CCTGCTTGTA CAATGAAGAC 
AGAAACCTGC TTCGAATCAG AGAGAAGGAA AGGCGCAACC AAGAGGCCCA CCAGGAGAAA 
GAGGCGTTTC CTGAGAAGGC TCCACTGTTT GCAGAGCCCT ACAAGACCGC GAAAGGCGAT 
GAGCTGTCGA GTCGCATACA GACCATGCTA GGTGACTATG AAGAGATGAA GGAGTTCCTA 
AGCAGCAAGT CCCACCCTCA CCGCCTGGAC GGCTCTGAGG ACAGGCCGGG GAAGCCCAGA 
TACCCCTCGT GTCACGACCG GGGGAGCGGT GCATCCGGCT CCTTCCGCAC ACATGTCTAC 
CACCAGCCTA CCCACACTTC TGCTCCCGGA TCACTTTCTG TCAGCAACGT CAGCCAAAGT 
CCAAAGATGG CACAGCCCAG GATGGAGCCG GTGCCAAGTC TCCATGCCAA AATCTACGGA 
GCGCCCGATG GCCCCCGTCC GGCTCAAGAT CGCCTCAGTC AGGGGCATTG TTCCAGAAAG 
TGTGACCGAA GAGCCGAGGG AGACTCGGAG AGGAAGCTCT CGCCCTTCAT CTCCTCCTTG 
CCGTCCCCCG TGCCCCCACT CTCACCTGCA CATTCCAGGC CGCAGGCAAC CAGCAAGGCT 
CACGGCAGCG GAACTGGCAC TCAGAGCTGC TATGCCTCCA AGCCTTCCAA GGACCCGGTG 
GTGACGGCCC AAGAGAAGGA GACTCCTCTC GACAGTCTGG TGGCAGTTAC CAGCCTTGGA 
GCAGCCCCTC CTCAGCCACC TTGCCAAACA TTTCCACCAC CTCCCCTCCC CTCAAAAAGC 
ATCGCAATGC AGCAGAAGCC CACAGCGTAC GTCCGTCCCA TGGACGGTCA GGACCAGGCT 
CCTAGCGAGT CCCCTGAGCT GAAGCCGCCG CTGGAGGACT TTGGTCAGCA AAGCTTTGAG 
AAACCGGACC TTAAAGTGCC TGCCAAAGCC AAGCTCACTA GACTAAGGAT GCCCTCGCAG 
ACGGTAGAGC AGCCGTACTC CAATGAAGTC CACTGTGTTG AAGAGATTCT GAAGGAAATG 
ACCCACTCGT GGCCGTCTCC TCTGACTGCC ATACACACAC CCAGTACAGC CGAGCCGTCC 
AGATTTCCTT TCCCTACAAA GGATCCTCTG CACATCAGTT CTGCAACCCA AAGCCAAAAA 
CAATACGATG CACCTTCAAA AACCCACCCC AACCCCCAGC AAGGAACATC CATGCTCGAG 
GATGACCTGC AGCTCAGTGA CAGTGAGGAA AGCGACGTGG AGCAAGCCGT GGAGAAGCCT 
CCGTCCCCAC CTGCACCTCC AAGTGCTCCG CAGACGATTC CCGAGCCCGT GGCCTCAGCA 
CATTCCAGTA GTGCAGAGTC AGAGAGCAGC GAGTCAGACA GTTCCTCCGA CTCTGAGAGC 
GAGAGCAGCT CCAGCGACAG TGAGGAGAAC GAGCCCCTGG AAACACAGGC TCCCGAGCCT 
GAGCCTCCGA CAACAAACAA ATGGCAGCTG GACAACTGGT TGACCAAAGT CAACCAACCA 
TCAGTGCCCC TAGAGAGCCG GGGGAGCACA GAGTCTCCAC GATGTCGCCA GGAAAGTAAG 
GGTGGTGGTG AGGGCAGCAG TGACCAGCAG CATCCTGATT CCAAAGACCC TCCCCTGAAG 
AGTTCCAGCA AAGCTCTCCG GGGTCCCTCT GAGGGGCCGC AGCCTGGGAA GAGGAACTGT 
CCGAAGTCCC CTGCTCAACA GGAAACCCCC CCACCTCGGC AAACTGTGGG CAGTAAACAA 
CCCAGAAAAC CCACCAAGGG CTCCACCCAG GCAGAGCAGC CCCAGGCCAG CTCTCGAGTG 
GAGGGCGAAG CAGGACCCGT AGCCTATGGC TCAAAGGAGC AGACATCCAA AGACAAACCC 
AAGGTGAAGA CGAAAGGCAG GCCCCGTGCT GTGGGCAGTC GGGAGCCCAA ATCTGAGGTC 
CCCGTACCTG TGCCTCAGGC AGCTGTGCCC AAGCCGCAGC CACCTGCGCC CACCCCCATC 
GAGAAGAGGA AACATAAGAG TTCCACAGCC CCCTCCAAGG CACTCTCAGG CCCTCAGCCA 
ACCAAGGACA GTGCTGGGGA CAGGAACCAG GAGCACCCTG CCCTTGTCTC CTTGACTCAG 
AGCCAGGGTC AACCCAACAG CGGCAGGGGC AGCGGTGGTG GCAGGACTAG TGGTTGCCGG 
CAGGCCGTGA TCACCCAGGA GGACAGCTGT AGAGACAAGC TCCTGTTGCC TTTGAGAGAC 
ACCAAACTGC TCTCGCCGCT CAGGGACTCT CCACCACCGA CAAGCTTGGT GGTGAAGATA 
ACCTTAGACC TTCTCACGAG GGTTCCGCAG CCACCGGGGA AGGGGGGCCG CCCCAGGAAG 
TCAGAGCACA AGCAGCTGCC AGCAGGGAAG AAGCAGGACT TGGAGGCAAG GGGCTGTGAC 
AGTTCCAGCC GAGTCACCAA GAAGAGAAAG GCTGAACCGG AGAAAGAGCA CAGTCACAAG 
AGGCTCCGAC TGGATAAGTC GCAGACGTCC TCATCCTCGT CTTCCCACGC AGAGTCTTCC 
AAGTCAAAGA CACCCAGGCC CTCCTCAGAG TGCTCAAGAA AGGAAATGCT TCCTCCTCCG 
CCGGTGGTGC CCTCATCCTC GTCGTCTTCC TCGTCTTCCC AGAAGCCAAG CAAACCTGCA 
CACAAGAGGC CCAGGCCAGA TGCAGACATC GGTAGCCAGG ACCCTCCCAG AAGTTCTGGC 
AGCACGAAGA GCAGCTGTAC AGACTCTTCA GTTCCGAAGC ACAGAAAAGT ACAGGCCCGG 
GACTCTGAAC ACAAAGGATC TTCTGGAGAT GCTGCGAATC CTTTTCCAGT GCCTTCTTTG 
CCAAATGGTA ACTCTAAGCC AGGAAAGCCA CAGGTGAAAT CTGACAGACA ACAAGCTGAC 
TTTCACATGA AGGAGGCTAA AAAGCTGAAG TGCAAGGCGG AGGCAATGGT GGACAAGGCT 
GGAAAAGCCT TCAAGTATTT GGAAGCCGTC CTGTCTTTTA TTGAGTGTGG AATGGCCACC 
GAGTCAGAGA GTTCAGCGAA GTCAGCGTAC ACCGTGTACT CAGAAACCGT AGACCTCATT 
AAGTTCGTGA TGTCGCTTAA ATCCTTCTCA GATAACACAG TGCCAGCACA AGAGAAGATA 
TTTGCTGTCT TATGCTTGCG TTGCCAGTCC CTTTTGAACA TGGCGATGTT CCGATGTAAA 
AAGGACACGG TGATGAAGTA TTCCCGTACC CTTAGCGAGC ACTTCAGGAG TACCTCCAAA 
GTGGCCCAGG CACCTTCTCC ATGCGTGGCA AGGCAAGTTC ACAGGCGTTC CGTCCCCCGT 
CTCCCCAATG CCTTCTCCTG CCAGCTCTGC TGGATCCCAG ACGAGTGCTG GCAGCAGTAT 
GGGGGCCATG GGGGCGACGG CCACCGTCAG CACCCCGGTC ACCATCCAGA ACATGACCTC 
CTCTTATGTC ACCATCACAT CCCATGTCCT TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001100676.1
CDS	133..3645
Translation	METKIRPGERGKFACLYNEDRNLLRIREKERRNQEAHQEKEAFPEKAPLFAEPYKTAKGDELSSRIQTMLGDYEEMKEFLSSKSHPHRLDGSEDRPGKPRYPSCHDRGSGASGSFRTHVYHQPTHTSAPGSLSVSNVSQSPKMAQPRMEPVPSLHAKIYGAPDGPRPAQDRLSQGHCSRKCDRRAEGDSERKLSPFISSLPSPVPPLSPAHSRPQATSKAHGSGTGTQSCYASKPSKDPVVTAQEKETPLDSLVAVTSLGAAPPQPPCQTFPPPPLPSKSIAMQQKPTAYVRPMDGQDQAPSESPELKPPLEDFGQQSFEKPDLKVPAKAKLTRLRMPSQTVEQPYSNEVHCVEEILKEMTHSWPSPLTAIHTPSTAEPSRFPFPTKDPLHISSATQSQKQYDAPSKTHPNPQQGTSMLEDDLQLSDSEESDVEQAVEKPPSPPAPPSAPQTIPEPVASAHSSSAESESSESDSSSDSESESSSSDSEENEPLETQAPEPEPPTTNKWQLDNWLTKVNQPSVPLESRGSTESPRCRQESKGGGEGSSDQQHPDSKDPPLKSSSKALRGPSEGPQPGKRNCPKSPAQQETPPPRQTVGSKQPRKPTKGSTQAEQPQASSRVEGEAGPVAYGSKEQTSKDKPKVKTKGRPRAVGSREPKSEVPVPVPQAAVPKPQPPAPTPIEKRKHKSSTAPSKALSGPQPTKDSAGDRNQEHPALVSLTQSQGQPNSGRGSGGGRTSGCRQAVITQEDSCRDKLLLPLRDTKLLSPLRDSPPPTSLVVKITLDLLTRVPQPPGKGGRPRKSEHKQLPAGKKQDLEARGCDSSSRVTKKRKAEPEKEHSHKRLRLDKSQTSSSSSSHAESSKSKTPRPSSECSRKEMLPPPPVVPSSSSSSSSSQKPSKPAHKRPRPDADIGSQDPPRSSGSTKSSCTDSSVPKHRKVQARDSEHKGSSGDAANPFPVPSLPNGNSKPGKPQVKSDRQQADFHMKEAKKLKCKAEAMVDKAGKAFKYLEAVLSFIECGMATESESSAKSAYTVYSETVDLIKFVMSLKSFSDNTVPAQEKIFAVLCLRCQSLLNMAMFRCKKDTVMKYSRTLSEHFRSTSKVAQAPSPCVARQVHRRSVPRLPNAFSCQLCWIPDECWQQYGGHGGDGHRQHPGHHPEHDLLLCHHHIPCP

Target ORF information:

RefSeq Version	NM_001107206.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001107206.1

ORF Insert Sequence:

ATGGAAACTA AAATTCGCCC TGGAGAGAGA GGGAAATTTG CCTGCTTGTA CAATGAAGAC 
AGAAACCTGC TTCGAATCAG AGAGAAGGAA AGGCGCAACC AAGAGGCCCA CCAGGAGAAA 
GAGGCGTTTC CTGAGAAGGC TCCACTGTTT GCAGAGCCCT ACAAGACCGC GAAAGGCGAT 
GAGCTGTCGA GTCGCATACA GACCATGCTA GGTGACTATG AAGAGATGAA GGAGTTCCTA 
AGCAGCAAGT CCCACCCTCA CCGCCTGGAC GGCTCTGAGG ACAGGCCGGG GAAGCCCAGA 
TACCCCTCGT GTCACGACCG GGGGAGCGGT GCATCCGGCT CCTTCCGCAC ACATGTCTAC 
CACCAGCCTA CCCACACTTC TGCTCCCGGA TCACTTTCTG TCAGCAACGT CAGCCAAAGT 
CCAAAGATGG CACAGCCCAG GATGGAGCCG GTGCCAAGTC TCCATGCCAA AATCTACGGA 
GCGCCCGATG GCCCCCGTCC GGCTCAAGAT CGCCTCAGTC AGGGGCATTG TTCCAGAAAG 
TGTGACCGAA GAGCCGAGGG AGACTCGGAG AGGAAGCTCT CGCCCTTCAT CTCCTCCTTG 
CCGTCCCCCG TGCCCCCACT CTCACCTGCA CATTCCAGGC CGCAGGCAAC CAGCAAGGCT 
CACGGCAGCG GAACTGGCAC TCAGAGCTGC TATGCCTCCA AGCCTTCCAA GGACCCGGTG 
GTGACGGCCC AAGAGAAGGA GACTCCTCTC GACAGTCTGG TGGCAGTTAC CAGCCTTGGA 
GCAGCCCCTC CTCAGCCACC TTGCCAAACA TTTCCACCAC CTCCCCTCCC CTCAAAAAGC 
ATCGCAATGC AGCAGAAGCC CACAGCGTAC GTCCGTCCCA TGGACGGTCA GGACCAGGCT 
CCTAGCGAGT CCCCTGAGCT GAAGCCGCCG CTGGAGGACT TTGGTCAGCA AAGCTTTGAG 
AAACCGGACC TTAAAGTGCC TGCCAAAGCC AAGCTCACTA GACTAAGGAT GCCCTCGCAG 
ACGGTAGAGC AGCCGTACTC CAATGAAGTC CACTGTGTTG AAGAGATTCT GAAGGAAATG 
ACCCACTCGT GGCCGTCTCC TCTGACTGCC ATACACACAC CCAGTACAGC CGAGCCGTCC 
AGATTTCCTT TCCCTACAAA GGATCCTCTG CACATCAGTT CTGCAACCCA AAGCCAAAAA 
CAATACGATG CACCTTCAAA AACCCACCCC AACCCCCAGC AAGGAACATC CATGCTCGAG 
GATGACCTGC AGCTCAGTGA CAGTGAGGAA AGCGACGTGG AGCAAGCCGT GGAGAAGCCT 
CCGTCCCCAC CTGCACCTCC AAGTGCTCCG CAGACGATTC CCGAGCCCGT GGCCTCAGCA 
CATTCCAGTA GTGCAGAGTC AGAGAGCAGC GAGTCAGACA GTTCCTCCGA CTCTGAGAGC 
GAGAGCAGCT CCAGCGACAG TGAGGAGAAC GAGCCCCTGG AAACACAGGC TCCCGAGCCT 
GAGCCTCCGA CAACAAACAA ATGGCAGCTG GACAACTGGT TGACCAAAGT CAACCAACCA 
TCAGTGCCCC TAGAGAGCCG GGGGAGCACA GAGTCTCCAC GATGTCGCCA GGAAAGTAAG 
GGTGGTGGTG AGGGCAGCAG TGACCAGCAG CATCCTGATT CCAAAGACCC TCCCCTGAAG 
AGTTCCAGCA AAGCTCTCCG GGGTCCCTCT GAGGGGCCGC AGCCTGGGAA GAGGAACTGT 
CCGAAGTCCC CTGCTCAACA GGAAACCCCC CCACCTCGGC AAACTGTGGG CAGTAAACAA 
CCCAGAAAAC CCACCAAGGG CTCCACCCAG GCAGAGCAGC CCCAGGCCAG CTCTCGAGTG 
GAGGGCGAAG CAGGACCCGT AGCCTATGGC TCAAAGGAGC AGACATCCAA AGACAAACCC 
AAGGTGAAGA CGAAAGGCAG GCCCCGTGCT GTGGGCAGTC GGGAGCCCAA ATCTGAGGTC 
CCCGTACCTG TGCCTCAGGC AGCTGTGCCC AAGCCGCAGC CACCTGCGCC CACCCCCATC 
GAGAAGAGGA AACATAAGAG TTCCACAGCC CCCTCCAAGG CACTCTCAGG CCCTCAGCCA 
ACCAAGGACA GTGCTGGGGA CAGGAACCAG GAGCACCCTG CCCTTGTCTC CTTGACTCAG 
AGCCAGGGTC AACCCAACAG CGGCAGGGGC AGCGGTGGTG GCAGGACTAG TGGTTGCCGG 
CAGGCCGTGA TCACCCAGGA GGACAGCTGT AGAGACAAGC TCCTGTTGCC TTTGAGAGAC 
ACCAAACTGC TCTCGCCGCT CAGGGACTCT CCACCACCGA CAAGCTTGGT GGTGAAGATA 
ACCTTAGACC TTCTCACGAG GGTTCCGCAG CCACCGGGGA AGGGGGGCCG CCCCAGGAAG 
TCAGAGCACA AGCAGCTGCC AGCAGGGAAG AAGCAGGACT TGGAGGCAAG GGGCTGTGAC 
AGTTCCAGCC GAGTCACCAA GAAGAGAAAG GCTGAACCGG AGAAAGAGCA CAGTCACAAG 
AGGCTCCGAC TGGATAAGTC GCAGACGTCC TCATCCTCGT CTTCCCACGC AGAGTCTTCC 
AAGTCAAAGA CACCCAGGCC CTCCTCAGAG TGCTCAAGAA AGGAAATGCT TCCTCCTCCG 
CCGGTGGTGC CCTCATCCTC GTCGTCTTCC TCGTCTTCCC AGAAGCCAAG CAAACCTGCA 
CACAAGAGGC CCAGGCCAGA TGCAGACATC GGTAGCCAGG ACCCTCCCAG AAGTTCTGGC 
AGCACGAAGA GCAGCTGTAC AGACTCTTCA GTTCCGAAGC ACAGAAAAGT ACAGGCCCGG 
GACTCTGAAC ACAAAGGATC TTCTGGAGAT GCTGCGAATC CTTTTCCAGT GCCTTCTTTG 
CCAAATGGTA ACTCTAAGCC AGGAAAGCCA CAGGTGAAAT CTGACAGACA ACAAGCTGAC 
TTTCACATGA AGGAGGCTAA AAAGCTGAAG TGCAAGGCGG AGGCAATGGT GGACAAGGCT 
GGAAAAGCCT TCAAGTATTT GGAAGCCGTC CTGTCTTTTA TTGAGTGTGG AATGGCCACC 
GAGTCAGAGA GTTCAGCGAA GTCAGCGTAC ACCGTGTACT CAGAAACCGT AGACCTCATT 
AAGTTCGTGA TGTCGCTTAA ATCCTTCTCA GATAACACAG TGCCAGCACA AGAGAAGATA 
TTTGCTGTCT TATGCTTGCG TTGCCAGTCC CTTTTGAACA TGGCGATGTT CCGATGTAAA 
AAGGACACGG TGATGAAGTA TTCCCGTACC CTTAGCGAGC ACTTCAGGAG TACCTCCAAA 
GTGGCCCAGG CACCTTCTCC ATGCGTGGCA AGGCAAGTTC ACAGGCGTTC CGTCCCCCGT 
CTCCCCAATG CCTTCTCCTG CCAGCTCTGC TGGATCCCAG ACGAGTGCTG GCAGCAGTAT 
GGGGGCCATG GGGGCGACGG CCACCGTCAG CACCCCGGTC ACCATCCAGA ACATGACCTC 
CTCTTATGTC ACCATCACAT CCCATGTCCT TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Aff1 ( XM_006250632.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006250694.1 Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa35837
Clone ID Related Accession (Same CDS sequence)	XM_006250632.3
Accession Version	XM_006250632.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3672bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	AF4/FMR2 family member 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250632.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTTTTA AGGACAGCAG CAGCAGCAGC TTGTACAATG AAGACAGAAA CCTGCTTCGA 
ATCAGAGAGA AGGAAAGGCG CAACCAAGAG GCCCACCAGG AGAAAGAGGC GTTTCCTGAG 
AAGGCTCCAC TGTTTGCAGA GCCCTACAAG ACCGCGAAAG GCGATGAGCT GTCGAGTCGC 
ATACAGACCA TGCTAGGTGA CTATGAAGAG ATGAAGGAGT TCCTAAGCAG CAAGTCCCAC 
CCTCACCGCC TGGACGGCTC TGAGGACAGG CCGGGGAAGC CCAGATACCC CTCGTGTCAC 
GACCGGGGGA GCGGTGCATC CGGCTCCTTC CGCACACATG TCTACCACCA GCCTACCCAC 
ACTTCTGCTC CCGGATCACT TTCTGTCAGC AACGTCAGCC AAAGTCCAAA GATGGCACAG 
CCCAGGATGG AGCCGGTGCC AAGTCTCCAT GCCAAAATCT ACGGAGCGCC CGATGGCCCC 
CGTCCGGCTC AAGATCGCCT CAGTCAGGGG CATTGTTCCA GAAAGTGTGA CCGAAGAGCC 
GAGGGAGACT CGGAGAGGAA GCTCTCGCCC TTCATCTCCT CCTTGCCGTC CCCCGTGCCC 
CCACTCTCAC CTGCACATTC CAGGCCGCAG GCAACCAGCA AGGCTCACGG CAGCGGAACT 
GGCACTCAGA GCTGCTATGC CTCCAAGCCT TCCAAGGACC CGGTGGTGAC GGCCCAAGAG 
AAGGAGACTC CTCTCGACAG TCTGGTGGCA GTTACCAGCC TTGGAGCAGC CCCTCCTCAG 
CCACCTTGCC AAACATTTCC ACCACCTCCC CTCCCCTCAA AAAGCATCGC AATGCAGCAG 
AAGCCCACAG CGTACGTCCG TCCCATGGAC GGTCAGGACC AGGCTCCTAG CGAGTCCCCT 
GAGCTGAAGC CGCCGCTGGA GGACTTTGGT CAGCAAAGCT TTGAGAAACC GGACCTTAAA 
GTGCCTGCCA AAGCCAAGCT CACTAGACTA AGGATGCCCT CGCAGACGGT AGAGCAGCCG 
TACTCCAATG AAGTCCACTG TGTTGAAGAG ATTCTGAAGG AAATGACCCA CTCGTGGCCG 
TCTCCTCTGA CTGCCATACA CACACCCAGT ACAGCCGAGC CGTCCAGATT TCCTTTCCCT 
ACAAAGGATC CTCTGCACAT CAGTTCTGCA ACCCAAAGCC AAAAACAATA CGATGCACCT 
TCAAAAACCC ACCCCAACCC CCAGCAAGGA ACATCCATGC TCGAGGATGA CCTGCAGCTC 
AGTGACAGTG AGGAAAGCGA CGTGGAGCAA GCCGTGGAGA AGCCTCCGTC CCCACCTGCA 
CCTCCAAGTG CTCCGCAGAC GATTCCCGAG CCCGTGGCCT CAGCACATTC CAGTAGTGCA 
GAGTCAGAGA GCAGCGAGTC AGACAGTTCC TCCGACTCTG AGAGCGAGAG CAGCTCCAGC 
GACAGTGAGG AGAACGAGCC CCTGGAAACA CAGGCTCCCG AGCCTGAGCC TCCGACAACA 
AACAAATGGC AGCTGGACAA CTGGTTGACC AAAGTCAACC AACCATCAGT GCCCCTAGAG 
AGCCGGGGGA GCACAGAGTC TCCACGATGT CGCCAGGAAA GTAAGGGTGG TGGTGAGGGC 
AGCAGTGACC AGCAGCATCC TGATTCCAAA GACCCTCCCC TGAAGAGTTC CAGCAAAGCT 
CTCCGGGGTC CCTCTGAGGG GCCGCAGCCT GGGAAGAGGA ACTGTCCGAA GTCCCCTGCT 
CAACAGGAAA CCCCCCCACC TCGGCAAACT GTGGGCAGTA AACAACCCAG AAAACCCACC 
AAGGGCTCCA CCCAGGCAGA GCAGCCCCAG GCCAGCTCTC GAGTGGAGGG CGAAGCAGGA 
CCCGTAGCCT ATGGCTCAAA GGAGCAGACA TCCAAAGACA AACCCAAGGT GAAGACGAAA 
GGCAGGCCCC GTGCTGTGGG CAGTCGGGAG CCCAAATCTG AGGTCCCCGT ACCTGTGCCT 
CAGGCAGCTG TGCCCAAGCC GCAGCCACCT GCGCCCACCC CCATCGAGAA GAGGAAACAT 
AAGAGTTCCA CAGCCCCCTC CAAGGCACTC TCAGGCCCTC AGCCAACCAA GGACAGTGCT 
GGGGACAGGA ACCAGGAGCA CCCTGCCCTT GTCTCCTTGA CTCAGAGCCA GGGTCAACCC 
AACAGCGGCA GGGGCAGCGG TGGTGGCAGG ACTAGTGGTT GCCGGCAGGC CGTGATCACC 
CAGGAGGACA GCTGTAGAGA CAAGCTCCTG TTGCCTTTGA GAGACACCAA ACTGCTCTCG 
CCGCTCAGGG ACTCTCCACC ACCGACAAGC TTGGTGGTGA AGATAACCTT AGACCTTCTC 
ACGAGGGTTC CGCAGCCACC GGGGAAGGGG GGCCGCCCCA GGAAGTCAGA GCACAAGCAG 
CTGCCAGCAG GGAAGAAGCA GGACTTGGAG GCAAGGGGCT GTGACAGTTC CAGCCGAGTC 
ACCAAGAAGA GAAAGGCTGA ACCGGAGAAA GAGCACAGTC ACAAGAGGCT CCGACTGGAT 
AAGTCGCAGA CGTCCTCATC CTCGTCTTCC CACGCAGAGT CTTCCAAGTC AAAGACACCC 
AGGCCCTCCT CAGAGTGCTC AAGAAAGGAA ATGCTTCCTC CTCCGCCGGT GGTGCCCTCA 
TCCTCGTCGT CTTCCTCGTC TTCCCAGAAG CCAAGCAAAC CTGCACACAA GAGGCCCAGG 
CCAGATGCAG ACATCGGTAG CCAGGACCCT CCCAGAAGTT CTGGCAGCAC GAAGAGCAGC 
TGTACAGACT CTTCAGTTCC GAAGCACAGA AAAGTACAGG CCCGGGACTC TGAACACAAA 
GGATCTTCTG GAGATGCTGC GAATCCTTTT CCAGTGCCTT CTTTGCCAAA TGGTAACTCT 
AAGCCAGGAA AGCCACAGGT GAAATCTGAC AGACAACAAG CTGACTTTCA CATGAAGGAG 
GCTAAAAAGC TGAAGTGCAA GGCGGAGGCA ATGGTGGACA AGGCTGGAAA AGCCTTCAAG 
TATTTGGAAG CCGTCCTGTC TTTTATTGAG TGTGGAATGG CCACCGAGTC AGAGAGTTCA 
GCGAAGTCAG CGTACACCGT GTACTCAGAA ACCGTAGACC TCATTAAGTT CGTGATGTCG 
CTTAAATCCT TCTCAGATAA CACAGTGCCA GCACAAGAGA AGATATTTGC TGTCTTATGC 
TTGCGTTGCC AGTCCCTTTT GAACATGGCG ATGTTCCGAT GTAAAAAGGA CACGGTGATG 
AAGTATTCCC GTACCCTTAG CGAGCACTTC AGGAGTACCT CCAAAGTGGC CCAGGCACCT 
TCTCCATGCG TGGCAAGAAG CACAGGCGTT CCGTCCCCCG TCTCCCCAAT GCCTTCTCCT 
GCCAGCTCTG CTGGATCCCA GACGAGTGCT GGCAGCAGTA TGGGGGCCAT GGGGGCGACG 
GCCACCGTCA GCACCCCGGT CACCATCCAG AACATGACCT CCTCTTATGT CACCATCACA 
TCCCATGTCC TTAAGGCCTT TACCCTTTGG GAACAGGCAG AGGCCCTCAC AAGGAAGAAC 
AAAGAATTCT TTGCTCAGCT CAGCACAAAA GTGCGCGTGT TGGCCCTCAA CAGCAGCCTG 
GTGGACCTGG TGCACTACAC AAGGCAGGGC CTCCAGCGGC TGAGACAAGC ACCCCAAACC 
CCGCTAATGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006250694.1
CDS	257..3928
Translation	MAFKDSSSSSLYNEDRNLLRIREKERRNQEAHQEKEAFPEKAPLFAEPYKTAKGDELSSRIQTMLGDYEEMKEFLSSKSHPHRLDGSEDRPGKPRYPSCHDRGSGASGSFRTHVYHQPTHTSAPGSLSVSNVSQSPKMAQPRMEPVPSLHAKIYGAPDGPRPAQDRLSQGHCSRKCDRRAEGDSERKLSPFISSLPSPVPPLSPAHSRPQATSKAHGSGTGTQSCYASKPSKDPVVTAQEKETPLDSLVAVTSLGAAPPQPPCQTFPPPPLPSKSIAMQQKPTAYVRPMDGQDQAPSESPELKPPLEDFGQQSFEKPDLKVPAKAKLTRLRMPSQTVEQPYSNEVHCVEEILKEMTHSWPSPLTAIHTPSTAEPSRFPFPTKDPLHISSATQSQKQYDAPSKTHPNPQQGTSMLEDDLQLSDSEESDVEQAVEKPPSPPAPPSAPQTIPEPVASAHSSSAESESSESDSSSDSESESSSSDSEENEPLETQAPEPEPPTTNKWQLDNWLTKVNQPSVPLESRGSTESPRCRQESKGGGEGSSDQQHPDSKDPPLKSSSKALRGPSEGPQPGKRNCPKSPAQQETPPPRQTVGSKQPRKPTKGSTQAEQPQASSRVEGEAGPVAYGSKEQTSKDKPKVKTKGRPRAVGSREPKSEVPVPVPQAAVPKPQPPAPTPIEKRKHKSSTAPSKALSGPQPTKDSAGDRNQEHPALVSLTQSQGQPNSGRGSGGGRTSGCRQAVITQEDSCRDKLLLPLRDTKLLSPLRDSPPPTSLVVKITLDLLTRVPQPPGKGGRPRKSEHKQLPAGKKQDLEARGCDSSSRVTKKRKAEPEKEHSHKRLRLDKSQTSSSSSSHAESSKSKTPRPSSECSRKEMLPPPPVVPSSSSSSSSSQKPSKPAHKRPRPDADIGSQDPPRSSGSTKSSCTDSSVPKHRKVQARDSEHKGSSGDAANPFPVPSLPNGNSKPGKPQVKSDRQQADFHMKEAKKLKCKAEAMVDKAGKAFKYLEAVLSFIECGMATESESSAKSAYTVYSETVDLIKFVMSLKSFSDNTVPAQEKIFAVLCLRCQSLLNMAMFRCKKDTVMKYSRTLSEHFRSTSKVAQAPSPCVARSTGVPSPVSPMPSPASSAGSQTSAGSSMGAMGATATVSTPVTIQNMTSSYVTITSHVLKAFTLWEQAEALTRKNKEFFAQLSTKVRVLALNSSLVDLVHYTRQGLQRLRQAPQTPLM

Target ORF information:

RefSeq Version	XM_006250632.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006250632.3

ORF Insert Sequence:

ATGGCTTTTA AGGACAGCAG CAGCAGCAGC TTGTACAATG AAGACAGAAA CCTGCTTCGA 
ATCAGAGAGA AGGAAAGGCG CAACCAAGAG GCCCACCAGG AGAAAGAGGC GTTTCCTGAG 
AAGGCTCCAC TGTTTGCAGA GCCCTACAAG ACCGCGAAAG GCGATGAGCT GTCGAGTCGC 
ATACAGACCA TGCTAGGTGA CTATGAAGAG ATGAAGGAGT TCCTAAGCAG CAAGTCCCAC 
CCTCACCGCC TGGACGGCTC TGAGGACAGG CCGGGGAAGC CCAGATACCC CTCGTGTCAC 
GACCGGGGGA GCGGTGCATC CGGCTCCTTC CGCACACATG TCTACCACCA GCCTACCCAC 
ACTTCTGCTC CCGGATCACT TTCTGTCAGC AACGTCAGCC AAAGTCCAAA GATGGCACAG 
CCCAGGATGG AGCCGGTGCC AAGTCTCCAT GCCAAAATCT ACGGAGCGCC CGATGGCCCC 
CGTCCGGCTC AAGATCGCCT CAGTCAGGGG CATTGTTCCA GAAAGTGTGA CCGAAGAGCC 
GAGGGAGACT CGGAGAGGAA GCTCTCGCCC TTCATCTCCT CCTTGCCGTC CCCCGTGCCC 
CCACTCTCAC CTGCACATTC CAGGCCGCAG GCAACCAGCA AGGCTCACGG CAGCGGAACT 
GGCACTCAGA GCTGCTATGC CTCCAAGCCT TCCAAGGACC CGGTGGTGAC GGCCCAAGAG 
AAGGAGACTC CTCTCGACAG TCTGGTGGCA GTTACCAGCC TTGGAGCAGC CCCTCCTCAG 
CCACCTTGCC AAACATTTCC ACCACCTCCC CTCCCCTCAA AAAGCATCGC AATGCAGCAG 
AAGCCCACAG CGTACGTCCG TCCCATGGAC GGTCAGGACC AGGCTCCTAG CGAGTCCCCT 
GAGCTGAAGC CGCCGCTGGA GGACTTTGGT CAGCAAAGCT TTGAGAAACC GGACCTTAAA 
GTGCCTGCCA AAGCCAAGCT CACTAGACTA AGGATGCCCT CGCAGACGGT AGAGCAGCCG 
TACTCCAATG AAGTCCACTG TGTTGAAGAG ATTCTGAAGG AAATGACCCA CTCGTGGCCG 
TCTCCTCTGA CTGCCATACA CACACCCAGT ACAGCCGAGC CGTCCAGATT TCCTTTCCCT 
ACAAAGGATC CTCTGCACAT CAGTTCTGCA ACCCAAAGCC AAAAACAATA CGATGCACCT 
TCAAAAACCC ACCCCAACCC CCAGCAAGGA ACATCCATGC TCGAGGATGA CCTGCAGCTC 
AGTGACAGTG AGGAAAGCGA CGTGGAGCAA GCCGTGGAGA AGCCTCCGTC CCCACCTGCA 
CCTCCAAGTG CTCCGCAGAC GATTCCCGAG CCCGTGGCCT CAGCACATTC CAGTAGTGCA 
GAGTCAGAGA GCAGCGAGTC AGACAGTTCC TCCGACTCTG AGAGCGAGAG CAGCTCCAGC 
GACAGTGAGG AGAACGAGCC CCTGGAAACA CAGGCTCCCG AGCCTGAGCC TCCGACAACA 
AACAAATGGC AGCTGGACAA CTGGTTGACC AAAGTCAACC AACCATCAGT GCCCCTAGAG 
AGCCGGGGGA GCACAGAGTC TCCACGATGT CGCCAGGAAA GTAAGGGTGG TGGTGAGGGC 
AGCAGTGACC AGCAGCATCC TGATTCCAAA GACCCTCCCC TGAAGAGTTC CAGCAAAGCT 
CTCCGGGGTC CCTCTGAGGG GCCGCAGCCT GGGAAGAGGA ACTGTCCGAA GTCCCCTGCT 
CAACAGGAAA CCCCCCCACC TCGGCAAACT GTGGGCAGTA AACAACCCAG AAAACCCACC 
AAGGGCTCCA CCCAGGCAGA GCAGCCCCAG GCCAGCTCTC GAGTGGAGGG CGAAGCAGGA 
CCCGTAGCCT ATGGCTCAAA GGAGCAGACA TCCAAAGACA AACCCAAGGT GAAGACGAAA 
GGCAGGCCCC GTGCTGTGGG CAGTCGGGAG CCCAAATCTG AGGTCCCCGT ACCTGTGCCT 
CAGGCAGCTG TGCCCAAGCC GCAGCCACCT GCGCCCACCC CCATCGAGAA GAGGAAACAT 
AAGAGTTCCA CAGCCCCCTC CAAGGCACTC TCAGGCCCTC AGCCAACCAA GGACAGTGCT 
GGGGACAGGA ACCAGGAGCA CCCTGCCCTT GTCTCCTTGA CTCAGAGCCA GGGTCAACCC 
AACAGCGGCA GGGGCAGCGG TGGTGGCAGG ACTAGTGGTT GCCGGCAGGC CGTGATCACC 
CAGGAGGACA GCTGTAGAGA CAAGCTCCTG TTGCCTTTGA GAGACACCAA ACTGCTCTCG 
CCGCTCAGGG ACTCTCCACC ACCGACAAGC TTGGTGGTGA AGATAACCTT AGACCTTCTC 
ACGAGGGTTC CGCAGCCACC GGGGAAGGGG GGCCGCCCCA GGAAGTCAGA GCACAAGCAG 
CTGCCAGCAG GGAAGAAGCA GGACTTGGAG GCAAGGGGCT GTGACAGTTC CAGCCGAGTC 
ACCAAGAAGA GAAAGGCTGA ACCGGAGAAA GAGCACAGTC ACAAGAGGCT CCGACTGGAT 
AAGTCGCAGA CGTCCTCATC CTCGTCTTCC CACGCAGAGT CTTCCAAGTC AAAGACACCC 
AGGCCCTCCT CAGAGTGCTC AAGAAAGGAA ATGCTTCCTC CTCCGCCGGT GGTGCCCTCA 
TCCTCGTCGT CTTCCTCGTC TTCCCAGAAG CCAAGCAAAC CTGCACACAA GAGGCCCAGG 
CCAGATGCAG ACATCGGTAG CCAGGACCCT CCCAGAAGTT CTGGCAGCAC GAAGAGCAGC 
TGTACAGACT CTTCAGTTCC GAAGCACAGA AAAGTACAGG CCCGGGACTC TGAACACAAA 
GGATCTTCTG GAGATGCTGC GAATCCTTTT CCAGTGCCTT CTTTGCCAAA TGGTAACTCT 
AAGCCAGGAA AGCCACAGGT GAAATCTGAC AGACAACAAG CTGACTTTCA CATGAAGGAG 
GCTAAAAAGC TGAAGTGCAA GGCGGAGGCA ATGGTGGACA AGGCTGGAAA AGCCTTCAAG 
TATTTGGAAG CCGTCCTGTC TTTTATTGAG TGTGGAATGG CCACCGAGTC AGAGAGTTCA 
GCGAAGTCAG CGTACACCGT GTACTCAGAA ACCGTAGACC TCATTAAGTT CGTGATGTCG 
CTTAAATCCT TCTCAGATAA CACAGTGCCA GCACAAGAGA AGATATTTGC TGTCTTATGC 
TTGCGTTGCC AGTCCCTTTT GAACATGGCG ATGTTCCGAT GTAAAAAGGA CACGGTGATG 
AAGTATTCCC GTACCCTTAG CGAGCACTTC AGGAGTACCT CCAAAGTGGC CCAGGCACCT 
TCTCCATGCG TGGCAAGAAG CACAGGCGTT CCGTCCCCCG TCTCCCCAAT GCCTTCTCCT 
GCCAGCTCTG CTGGATCCCA GACGAGTGCT GGCAGCAGTA TGGGGGCCAT GGGGGCGACG 
GCCACCGTCA GCACCCCGGT CACCATCCAG AACATGACCT CCTCTTATGT CACCATCACA 
TCCCATGTCC TTAAGGCCTT TACCCTTTGG GAACAGGCAG AGGCCCTCAC AAGGAAGAAC 
AAAGAATTCT TTGCTCAGCT CAGCACAAAA GTGCGCGTGT TGGCCCTCAA CAGCAGCCTG 
GTGGACCTGG TGCACTACAC AAGGCAGGGC CTCCAGCGGC TGAGACAAGC ACCCCAAACC 
CCGCTAATGT AG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Aff1 ( XM_006250633.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006250695.1 Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X2, mRNA.

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CloneID	ORa35838
Clone ID Related Accession (Same CDS sequence)	XM_006250633.3
Accession Version	XM_006250633.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3660bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	AF4/FMR2 family member 1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005113.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006250633.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCAGCCC ACTCCAGCTT GTACAATGAA GACAGAAACC TGCTTCGAAT CAGAGAGAAG 
GAAAGGCGCA ACCAAGAGGC CCACCAGGAG AAAGAGGCGT TTCCTGAGAA GGCTCCACTG 
TTTGCAGAGC CCTACAAGAC CGCGAAAGGC GATGAGCTGT CGAGTCGCAT ACAGACCATG 
CTAGGTGACT ATGAAGAGAT GAAGGAGTTC CTAAGCAGCA AGTCCCACCC TCACCGCCTG 
GACGGCTCTG AGGACAGGCC GGGGAAGCCC AGATACCCCT CGTGTCACGA CCGGGGGAGC 
GGTGCATCCG GCTCCTTCCG CACACATGTC TACCACCAGC CTACCCACAC TTCTGCTCCC 
GGATCACTTT CTGTCAGCAA CGTCAGCCAA AGTCCAAAGA TGGCACAGCC CAGGATGGAG 
CCGGTGCCAA GTCTCCATGC CAAAATCTAC GGAGCGCCCG ATGGCCCCCG TCCGGCTCAA 
GATCGCCTCA GTCAGGGGCA TTGTTCCAGA AAGTGTGACC GAAGAGCCGA GGGAGACTCG 
GAGAGGAAGC TCTCGCCCTT CATCTCCTCC TTGCCGTCCC CCGTGCCCCC ACTCTCACCT 
GCACATTCCA GGCCGCAGGC AACCAGCAAG GCTCACGGCA GCGGAACTGG CACTCAGAGC 
TGCTATGCCT CCAAGCCTTC CAAGGACCCG GTGGTGACGG CCCAAGAGAA GGAGACTCCT 
CTCGACAGTC TGGTGGCAGT TACCAGCCTT GGAGCAGCCC CTCCTCAGCC ACCTTGCCAA 
ACATTTCCAC CACCTCCCCT CCCCTCAAAA AGCATCGCAA TGCAGCAGAA GCCCACAGCG 
TACGTCCGTC CCATGGACGG TCAGGACCAG GCTCCTAGCG AGTCCCCTGA GCTGAAGCCG 
CCGCTGGAGG ACTTTGGTCA GCAAAGCTTT GAGAAACCGG ACCTTAAAGT GCCTGCCAAA 
GCCAAGCTCA CTAGACTAAG GATGCCCTCG CAGACGGTAG AGCAGCCGTA CTCCAATGAA 
GTCCACTGTG TTGAAGAGAT TCTGAAGGAA ATGACCCACT CGTGGCCGTC TCCTCTGACT 
GCCATACACA CACCCAGTAC AGCCGAGCCG TCCAGATTTC CTTTCCCTAC AAAGGATCCT 
CTGCACATCA GTTCTGCAAC CCAAAGCCAA AAACAATACG ATGCACCTTC AAAAACCCAC 
CCCAACCCCC AGCAAGGAAC ATCCATGCTC GAGGATGACC TGCAGCTCAG TGACAGTGAG 
GAAAGCGACG TGGAGCAAGC CGTGGAGAAG CCTCCGTCCC CACCTGCACC TCCAAGTGCT 
CCGCAGACGA TTCCCGAGCC CGTGGCCTCA GCACATTCCA GTAGTGCAGA GTCAGAGAGC 
AGCGAGTCAG ACAGTTCCTC CGACTCTGAG AGCGAGAGCA GCTCCAGCGA CAGTGAGGAG 
AACGAGCCCC TGGAAACACA GGCTCCCGAG CCTGAGCCTC CGACAACAAA CAAATGGCAG 
CTGGACAACT GGTTGACCAA AGTCAACCAA CCATCAGTGC CCCTAGAGAG CCGGGGGAGC 
ACAGAGTCTC CACGATGTCG CCAGGAAAGT AAGGGTGGTG GTGAGGGCAG CAGTGACCAG 
CAGCATCCTG ATTCCAAAGA CCCTCCCCTG AAGAGTTCCA GCAAAGCTCT CCGGGGTCCC 
TCTGAGGGGC CGCAGCCTGG GAAGAGGAAC TGTCCGAAGT CCCCTGCTCA ACAGGAAACC 
CCCCCACCTC GGCAAACTGT GGGCAGTAAA CAACCCAGAA AACCCACCAA GGGCTCCACC 
CAGGCAGAGC AGCCCCAGGC CAGCTCTCGA GTGGAGGGCG AAGCAGGACC CGTAGCCTAT 
GGCTCAAAGG AGCAGACATC CAAAGACAAA CCCAAGGTGA AGACGAAAGG CAGGCCCCGT 
GCTGTGGGCA GTCGGGAGCC CAAATCTGAG GTCCCCGTAC CTGTGCCTCA GGCAGCTGTG 
CCCAAGCCGC AGCCACCTGC GCCCACCCCC ATCGAGAAGA GGAAACATAA GAGTTCCACA 
GCCCCCTCCA AGGCACTCTC AGGCCCTCAG CCAACCAAGG ACAGTGCTGG GGACAGGAAC 
CAGGAGCACC CTGCCCTTGT CTCCTTGACT CAGAGCCAGG GTCAACCCAA CAGCGGCAGG 
GGCAGCGGTG GTGGCAGGAC TAGTGGTTGC CGGCAGGCCG TGATCACCCA GGAGGACAGC 
TGTAGAGACA AGCTCCTGTT GCCTTTGAGA GACACCAAAC TGCTCTCGCC GCTCAGGGAC 
TCTCCACCAC CGACAAGCTT GGTGGTGAAG ATAACCTTAG ACCTTCTCAC GAGGGTTCCG 
CAGCCACCGG GGAAGGGGGG CCGCCCCAGG AAGTCAGAGC ACAAGCAGCT GCCAGCAGGG 
AAGAAGCAGG ACTTGGAGGC AAGGGGCTGT GACAGTTCCA GCCGAGTCAC CAAGAAGAGA 
AAGGCTGAAC CGGAGAAAGA GCACAGTCAC AAGAGGCTCC GACTGGATAA GTCGCAGACG 
TCCTCATCCT CGTCTTCCCA CGCAGAGTCT TCCAAGTCAA AGACACCCAG GCCCTCCTCA 
GAGTGCTCAA GAAAGGAAAT GCTTCCTCCT CCGCCGGTGG TGCCCTCATC CTCGTCGTCT 
TCCTCGTCTT CCCAGAAGCC AAGCAAACCT GCACACAAGA GGCCCAGGCC AGATGCAGAC 
ATCGGTAGCC AGGACCCTCC CAGAAGTTCT GGCAGCACGA AGAGCAGCTG TACAGACTCT 
TCAGTTCCGA AGCACAGAAA AGTACAGGCC CGGGACTCTG AACACAAAGG ATCTTCTGGA 
GATGCTGCGA ATCCTTTTCC AGTGCCTTCT TTGCCAAATG GTAACTCTAA GCCAGGAAAG 
CCACAGGTGA AATCTGACAG ACAACAAGCT GACTTTCACA TGAAGGAGGC TAAAAAGCTG 
AAGTGCAAGG CGGAGGCAAT GGTGGACAAG GCTGGAAAAG CCTTCAAGTA TTTGGAAGCC 
GTCCTGTCTT TTATTGAGTG TGGAATGGCC ACCGAGTCAG AGAGTTCAGC GAAGTCAGCG 
TACACCGTGT ACTCAGAAAC CGTAGACCTC ATTAAGTTCG TGATGTCGCT TAAATCCTTC 
TCAGATAACA CAGTGCCAGC ACAAGAGAAG ATATTTGCTG TCTTATGCTT GCGTTGCCAG 
TCCCTTTTGA ACATGGCGAT GTTCCGATGT AAAAAGGACA CGGTGATGAA GTATTCCCGT 
ACCCTTAGCG AGCACTTCAG GAGTACCTCC AAAGTGGCCC AGGCACCTTC TCCATGCGTG 
GCAAGAAGCA CAGGCGTTCC GTCCCCCGTC TCCCCAATGC CTTCTCCTGC CAGCTCTGCT 
GGATCCCAGA CGAGTGCTGG CAGCAGTATG GGGGCCATGG GGGCGACGGC CACCGTCAGC 
ACCCCGGTCA CCATCCAGAA CATGACCTCC TCTTATGTCA CCATCACATC CCATGTCCTT 
AAGGCCTTTA CCCTTTGGGA ACAGGCAGAG GCCCTCACAA GGAAGAACAA AGAATTCTTT 
GCTCAGCTCA GCACAAAAGT GCGCGTGTTG GCCCTCAACA GCAGCCTGGT GGACCTGGTG 
CACTACACAA GGCAGGGCCT CCAGCGGCTG AGACAAGCAC CCCAAACCCC GCTAATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006250695.1
CDS	146..3805
Translation	MAAHSSLYNEDRNLLRIREKERRNQEAHQEKEAFPEKAPLFAEPYKTAKGDELSSRIQTMLGDYEEMKEFLSSKSHPHRLDGSEDRPGKPRYPSCHDRGSGASGSFRTHVYHQPTHTSAPGSLSVSNVSQSPKMAQPRMEPVPSLHAKIYGAPDGPRPAQDRLSQGHCSRKCDRRAEGDSERKLSPFISSLPSPVPPLSPAHSRPQATSKAHGSGTGTQSCYASKPSKDPVVTAQEKETPLDSLVAVTSLGAAPPQPPCQTFPPPPLPSKSIAMQQKPTAYVRPMDGQDQAPSESPELKPPLEDFGQQSFEKPDLKVPAKAKLTRLRMPSQTVEQPYSNEVHCVEEILKEMTHSWPSPLTAIHTPSTAEPSRFPFPTKDPLHISSATQSQKQYDAPSKTHPNPQQGTSMLEDDLQLSDSEESDVEQAVEKPPSPPAPPSAPQTIPEPVASAHSSSAESESSESDSSSDSESESSSSDSEENEPLETQAPEPEPPTTNKWQLDNWLTKVNQPSVPLESRGSTESPRCRQESKGGGEGSSDQQHPDSKDPPLKSSSKALRGPSEGPQPGKRNCPKSPAQQETPPPRQTVGSKQPRKPTKGSTQAEQPQASSRVEGEAGPVAYGSKEQTSKDKPKVKTKGRPRAVGSREPKSEVPVPVPQAAVPKPQPPAPTPIEKRKHKSSTAPSKALSGPQPTKDSAGDRNQEHPALVSLTQSQGQPNSGRGSGGGRTSGCRQAVITQEDSCRDKLLLPLRDTKLLSPLRDSPPPTSLVVKITLDLLTRVPQPPGKGGRPRKSEHKQLPAGKKQDLEARGCDSSSRVTKKRKAEPEKEHSHKRLRLDKSQTSSSSSSHAESSKSKTPRPSSECSRKEMLPPPPVVPSSSSSSSSSQKPSKPAHKRPRPDADIGSQDPPRSSGSTKSSCTDSSVPKHRKVQARDSEHKGSSGDAANPFPVPSLPNGNSKPGKPQVKSDRQQADFHMKEAKKLKCKAEAMVDKAGKAFKYLEAVLSFIECGMATESESSAKSAYTVYSETVDLIKFVMSLKSFSDNTVPAQEKIFAVLCLRCQSLLNMAMFRCKKDTVMKYSRTLSEHFRSTSKVAQAPSPCVARSTGVPSPVSPMPSPASSAGSQTSAGSSMGAMGATATVSTPVTIQNMTSSYVTITSHVLKAFTLWEQAEALTRKNKEFFAQLSTKVRVLALNSSLVDLVHYTRQGLQRLRQAPQTPLM

Target ORF information:

RefSeq Version	XM_006250633.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus AF4/FMR2 family, member 1 (Aff1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006250633.3

ORF Insert Sequence:

ATGGCAGCCC ACTCCAGCTT GTACAATGAA GACAGAAACC TGCTTCGAAT CAGAGAGAAG 
GAAAGGCGCA ACCAAGAGGC CCACCAGGAG AAAGAGGCGT TTCCTGAGAA GGCTCCACTG 
TTTGCAGAGC CCTACAAGAC CGCGAAAGGC GATGAGCTGT CGAGTCGCAT ACAGACCATG 
CTAGGTGACT ATGAAGAGAT GAAGGAGTTC CTAAGCAGCA AGTCCCACCC TCACCGCCTG 
GACGGCTCTG AGGACAGGCC GGGGAAGCCC AGATACCCCT CGTGTCACGA CCGGGGGAGC 
GGTGCATCCG GCTCCTTCCG CACACATGTC TACCACCAGC CTACCCACAC TTCTGCTCCC 
GGATCACTTT CTGTCAGCAA CGTCAGCCAA AGTCCAAAGA TGGCACAGCC CAGGATGGAG 
CCGGTGCCAA GTCTCCATGC CAAAATCTAC GGAGCGCCCG ATGGCCCCCG TCCGGCTCAA 
GATCGCCTCA GTCAGGGGCA TTGTTCCAGA AAGTGTGACC GAAGAGCCGA GGGAGACTCG 
GAGAGGAAGC TCTCGCCCTT CATCTCCTCC TTGCCGTCCC CCGTGCCCCC ACTCTCACCT 
GCACATTCCA GGCCGCAGGC AACCAGCAAG GCTCACGGCA GCGGAACTGG CACTCAGAGC 
TGCTATGCCT CCAAGCCTTC CAAGGACCCG GTGGTGACGG CCCAAGAGAA GGAGACTCCT 
CTCGACAGTC TGGTGGCAGT TACCAGCCTT GGAGCAGCCC CTCCTCAGCC ACCTTGCCAA 
ACATTTCCAC CACCTCCCCT CCCCTCAAAA AGCATCGCAA TGCAGCAGAA GCCCACAGCG 
TACGTCCGTC CCATGGACGG TCAGGACCAG GCTCCTAGCG AGTCCCCTGA GCTGAAGCCG 
CCGCTGGAGG ACTTTGGTCA GCAAAGCTTT GAGAAACCGG ACCTTAAAGT GCCTGCCAAA 
GCCAAGCTCA CTAGACTAAG GATGCCCTCG CAGACGGTAG AGCAGCCGTA CTCCAATGAA 
GTCCACTGTG TTGAAGAGAT TCTGAAGGAA ATGACCCACT CGTGGCCGTC TCCTCTGACT 
GCCATACACA CACCCAGTAC AGCCGAGCCG TCCAGATTTC CTTTCCCTAC AAAGGATCCT 
CTGCACATCA GTTCTGCAAC CCAAAGCCAA AAACAATACG ATGCACCTTC AAAAACCCAC 
CCCAACCCCC AGCAAGGAAC ATCCATGCTC GAGGATGACC TGCAGCTCAG TGACAGTGAG 
GAAAGCGACG TGGAGCAAGC CGTGGAGAAG CCTCCGTCCC CACCTGCACC TCCAAGTGCT 
CCGCAGACGA TTCCCGAGCC CGTGGCCTCA GCACATTCCA GTAGTGCAGA GTCAGAGAGC 
AGCGAGTCAG ACAGTTCCTC CGACTCTGAG AGCGAGAGCA GCTCCAGCGA CAGTGAGGAG 
AACGAGCCCC TGGAAACACA GGCTCCCGAG CCTGAGCCTC CGACAACAAA CAAATGGCAG 
CTGGACAACT GGTTGACCAA AGTCAACCAA CCATCAGTGC CCCTAGAGAG CCGGGGGAGC 
ACAGAGTCTC CACGATGTCG CCAGGAAAGT AAGGGTGGTG GTGAGGGCAG CAGTGACCAG 
CAGCATCCTG ATTCCAAAGA CCCTCCCCTG AAGAGTTCCA GCAAAGCTCT CCGGGGTCCC 
TCTGAGGGGC CGCAGCCTGG GAAGAGGAAC TGTCCGAAGT CCCCTGCTCA ACAGGAAACC 
CCCCCACCTC GGCAAACTGT GGGCAGTAAA CAACCCAGAA AACCCACCAA GGGCTCCACC 
CAGGCAGAGC AGCCCCAGGC CAGCTCTCGA GTGGAGGGCG AAGCAGGACC CGTAGCCTAT 
GGCTCAAAGG AGCAGACATC CAAAGACAAA CCCAAGGTGA AGACGAAAGG CAGGCCCCGT 
GCTGTGGGCA GTCGGGAGCC CAAATCTGAG GTCCCCGTAC CTGTGCCTCA GGCAGCTGTG 
CCCAAGCCGC AGCCACCTGC GCCCACCCCC ATCGAGAAGA GGAAACATAA GAGTTCCACA 
GCCCCCTCCA AGGCACTCTC AGGCCCTCAG CCAACCAAGG ACAGTGCTGG GGACAGGAAC 
CAGGAGCACC CTGCCCTTGT CTCCTTGACT CAGAGCCAGG GTCAACCCAA CAGCGGCAGG 
GGCAGCGGTG GTGGCAGGAC TAGTGGTTGC CGGCAGGCCG TGATCACCCA GGAGGACAGC 
TGTAGAGACA AGCTCCTGTT GCCTTTGAGA GACACCAAAC TGCTCTCGCC GCTCAGGGAC 
TCTCCACCAC CGACAAGCTT GGTGGTGAAG ATAACCTTAG ACCTTCTCAC GAGGGTTCCG 
CAGCCACCGG GGAAGGGGGG CCGCCCCAGG AAGTCAGAGC ACAAGCAGCT GCCAGCAGGG 
AAGAAGCAGG ACTTGGAGGC AAGGGGCTGT GACAGTTCCA GCCGAGTCAC CAAGAAGAGA 
AAGGCTGAAC CGGAGAAAGA GCACAGTCAC AAGAGGCTCC GACTGGATAA GTCGCAGACG 
TCCTCATCCT CGTCTTCCCA CGCAGAGTCT TCCAAGTCAA AGACACCCAG GCCCTCCTCA 
GAGTGCTCAA GAAAGGAAAT GCTTCCTCCT CCGCCGGTGG TGCCCTCATC CTCGTCGTCT 
TCCTCGTCTT CCCAGAAGCC AAGCAAACCT GCACACAAGA GGCCCAGGCC AGATGCAGAC 
ATCGGTAGCC AGGACCCTCC CAGAAGTTCT GGCAGCACGA AGAGCAGCTG TACAGACTCT 
TCAGTTCCGA AGCACAGAAA AGTACAGGCC CGGGACTCTG AACACAAAGG ATCTTCTGGA 
GATGCTGCGA ATCCTTTTCC AGTGCCTTCT TTGCCAAATG GTAACTCTAA GCCAGGAAAG 
CCACAGGTGA AATCTGACAG ACAACAAGCT GACTTTCACA TGAAGGAGGC TAAAAAGCTG 
AAGTGCAAGG CGGAGGCAAT GGTGGACAAG GCTGGAAAAG CCTTCAAGTA TTTGGAAGCC 
GTCCTGTCTT TTATTGAGTG TGGAATGGCC ACCGAGTCAG AGAGTTCAGC GAAGTCAGCG 
TACACCGTGT ACTCAGAAAC CGTAGACCTC ATTAAGTTCG TGATGTCGCT TAAATCCTTC 
TCAGATAACA CAGTGCCAGC ACAAGAGAAG ATATTTGCTG TCTTATGCTT GCGTTGCCAG 
TCCCTTTTGA ACATGGCGAT GTTCCGATGT AAAAAGGACA CGGTGATGAA GTATTCCCGT 
ACCCTTAGCG AGCACTTCAG GAGTACCTCC AAAGTGGCCC AGGCACCTTC TCCATGCGTG 
GCAAGAAGCA CAGGCGTTCC GTCCCCCGTC TCCCCAATGC CTTCTCCTGC CAGCTCTGCT 
GGATCCCAGA CGAGTGCTGG CAGCAGTATG GGGGCCATGG GGGCGACGGC CACCGTCAGC 
ACCCCGGTCA CCATCCAGAA CATGACCTCC TCTTATGTCA CCATCACATC CCATGTCCTT 
AAGGCCTTTA CCCTTTGGGA ACAGGCAGAG GCCCTCACAA GGAAGAACAA AGAATTCTTT 
GCTCAGCTCA GCACAAAAGT GCGCGTGTTG GCCCTCAACA GCAGCCTGGT GGACCTGGTG 
CACTACACAA GGCAGGGCCT CCAGCGGCTG AGACAAGCAC CCCAAACCCC GCTAATGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The super elongation complex (SEC) family in transcriptional control.
Nature reviews. Molecular cell biology13(9)543-7(2012 Sep)
Luo Z,Lin C,Shilatifard A

The little elongation complex regulates small nuclear RNA transcription.
Molecular cell44(6)954-65(2011 Dec)
Smith ER,Lin C,Garrett AS,Thornton J,Mohaghegh N,Hu D,Jackson J,Saraf A,Swanson SK,Seidel C,Florens L,Washburn MP,Eissenberg JC,Shilatifard A

Cloning and developmental expression of the murine homolog of the acute leukemia proto-oncogene AF4.
Oncogene15(16)1967-78(1997 Oct)
Baskaran K,Erfurth F,Taborn G,Copeland NG,Gilbert DJ,Jenkins NA,Iannaccone PM,Domer PH

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Aff1 cDNA ORF clone, Rattus norvegicus(Norway rat)

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