Epcam cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Epcam
Entrez Gene ID	171577
Full Name	epithelial cell adhesion molecule
Synonyms	Egp314,Tacstd1
General protein information	Preferred Names epithelial cell adhesion molecule Names epithelial cell adhesion molecule ep-CAM epithelial glycoprotein 314 tumor-associated calcium signal transducer 1
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 6 Map Location: 6q12
Summary	involved in metastasis formation and tumor progression [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_017594027.1	XP_017449516.1	epithelial cell adhesion molecule isoform X1
NM_138541.1	NP_612550.1	epithelial cell adhesion molecule precursor

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	epcam	NP_001017593.1
Homo sapiens (human)	EPCAM	NP_002345.2
Macaca mulatta (Rhesus monkey)	EPCAM	NP_001035118.1
Canis lupus familiaris (dog)	EPCAM	XP_005626295.1
Mus musculus (house mouse)	Epcam	NP_032558.2
Rattus norvegicus (Norway rat)	Epcam	NP_612550.1
Pan troglodytes (chimpanzee)	EPCAM	XP_515458.2
Bos taurus (cattle)	EPCAM	NP_001030367.1
Gallus gallus (chicken)	EPCAM	NP_001012582.1
Xenopus tropicalis (tropical clawed frog)	epcam	NP_001011149.1

Gene Ontology
Bibliography

Related articles in PubMed

EpCAM is decreased but is still present in uterine epithelial cells during early pregnancy in the rat: potential mechanism for maintenance of mucosal integrity during implantation.
Poon CE, Madawala RJ, Day ML, Murphy CR
Cell and tissue research359(2)655-664(2015 Feb)

Cancer stem cell markers correlate with early recurrence and survival in hepatocellular carcinoma.
Guo Z, Li LQ, Jiang JH, Ou C, Zeng LX, Xiang BD
World journal of gastroenterology20(8)2098-106(2014 Feb)

EpCAM-associated claudin-7 supports lymphatic spread and drug resistance in rat pancreatic cancer.
Thuma F, Zöller M
International journal of cancer133(4)855-66(2013 Aug)

Increased expression of epithelial cell adhesion molecule (EpCAM) in rat hepatic tumors induced by diethylnitrosamine.
Kang JS
Asian Pacific journal of cancer prevention : APJCP13(8)3627-30(2012)

Characterization of epithelial cell adhesion molecule as a surface marker on undifferentiated human embryonic stem cells.
Ng VY, Ang SN, Chan JX, Choo AB
Stem cells (Dayton, Ohio)28(1)29-35(2010 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Epcam gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Epcam cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa01613	NM_138541.1 Latest version!	Rattus norvegicus epithelial cell adhesion molecule (Epcam), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa01613	XM_017594027.1 Latest version!	Rattus norvegicus epithelial cell adhesion molecule (Epcam), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Epcam ( NM_138541.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_612550.1 Rattus norvegicus epithelial cell adhesion molecule (Epcam), mRNA.

Price & Availability↑

CloneID	ORa01613
Clone ID Related Accession (Same CDS sequence)	XM_017594027.1 , NM_138541.1
Accession Version	NM_138541.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 948bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1577203200000
Organism	Rattus norvegicus(Norway rat)
Product	epithelial cell adhesion molecule precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ001044.1. Sequence Note: This sequence has been modified as follows: removed 55 bp suspected to be vector contamination from the 5' end. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AJ001044.1, BC061787.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGGCGCCCC CCAAGGCCCT CGCGTTCGGG CTCCTGCTCG CGGTGGTCAC GGCGACGCTG 
GCCGCAGCTC AGAAAGACTG TGTCTGTAAC AACTACAAGC TGACGTCACG GTGCTATGAG 
AATGAGAATG GTGAATGCCA GTGTACTTCC TATGGGACAC AAAATACTGT CATTTGCTCC 
AAACTGGCAT CCAAGTGCTT GGTGATGAAG GCGGAGATGA CTCACAGCAA GTCTGGGAGG 
AGGATGAAAC CCGAGGGGGC GATCCAGAAC AACGACGGTC TGTATGATCC CGAGTGTGAC 
GAGCAAGGGC TCTTCAAAGC CAAGCAGTGC AACGGCACCG CCACGTGCTG GTGCGTGAAC 
ACCGCGGGTG TCCGGAGAAC CGACAAGGAC ACGGAGATCA CGTGCTCCGA GAGAGTGAGG 
ACCTACTGGA TCATCATTGA GCTCAAACAC AAAGAAAGAG CACAGCCTTA TAACTTCGAG 
AGTTTGCATA CTGCACTTCA GGACACATTT GCATCTCGAT ACATGCTGAA TCCGAAATTT 
ATCAAAAGTA TTATGTATGA GAATAATGTT ATCACTATTG ATTTGATGCA AAACTCTTCT 
CAGAAGACTC AAGATGATGT GGACATAGCT GATGTGGCTT ACTATTTTGA GAAAGATGTA 
AAGGGGGAGT CCTTGTTCCA TTCATCTAAG AGCATGGACC TGAGGGTGAA CGGGGAGCTC 
CTCGATCTGG ACCCCGGGCA GACTCTGATT TACTACGTCG ATGAAAAGGC CCCGGAGTTT 
TCCATGCAGG GCCTCACGGC TGGGATCATC GCCGTCATTG TCGTGGTGGT GTTAGCAGTC 
ATTGCGGGGA TTGTTGTCCT GGTTATATCT ACAAGGAAGA GATCAGCAAA ATATGAGAAG 
GCTGAGATAA AGGAGATGGG TGAGATACAC AGAGAGCTCA ATGCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_612550.1
CDS	68..1015
Translation	MAPPKALAFGLLLAVVTATLAAAQKDCVCNNYKLTSRCYENENGECQCTSYGTQNTVICSKLASKCLVMKAEMTHSKSGRRMKPEGAIQNNDGLYDPECDEQGLFKAKQCNGTATCWCVNTAGVRRTDKDTEITCSERVRTYWIIIELKHKERAQPYNFESLHTALQDTFASRYMLNPKFIKSIMYENNVITIDLMQNSSQKTQDDVDIADVAYYFEKDVKGESLFHSSKSMDLRVNGELLDLDPGQTLIYYVDEKAPEFSMQGLTAGIIAVIVVVVLAVIAGIVVLVISTRKRSAKYEKAEIKEMGEIHRELNA

Target ORF information:

RefSeq Version	NM_138541.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus epithelial cell adhesion molecule (Epcam), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_138541.1

ORF Insert Sequence:

ATGGCGCCCC CCAAGGCCCT CGCGTTCGGG CTCCTGCTCG CGGTGGTCAC GGCGACGCTG 
GCCGCAGCTC AGAAAGACTG TGTCTGTAAC AACTACAAGC TGACGTCACG GTGCTATGAG 
AATGAGAATG GTGAATGCCA GTGTACTTCC TATGGGACAC AAAATACTGT CATTTGCTCC 
AAACTGGCAT CCAAGTGCTT GGTGATGAAG GCGGAGATGA CTCACAGCAA GTCTGGGAGG 
AGGATGAAAC CCGAGGGGGC GATCCAGAAC AACGACGGTC TGTATGATCC CGAGTGTGAC 
GAGCAAGGGC TCTTCAAAGC CAAGCAGTGC AACGGCACCG CCACGTGCTG GTGCGTGAAC 
ACCGCGGGTG TCCGGAGAAC CGACAAGGAC ACGGAGATCA CGTGCTCCGA GAGAGTGAGG 
ACCTACTGGA TCATCATTGA GCTCAAACAC AAAGAAAGAG CACAGCCTTA TAACTTCGAG 
AGTTTGCATA CTGCACTTCA GGACACATTT GCATCTCGAT ACATGCTGAA TCCGAAATTT 
ATCAAAAGTA TTATGTATGA GAATAATGTT ATCACTATTG ATTTGATGCA AAACTCTTCT 
CAGAAGACTC AAGATGATGT GGACATAGCT GATGTGGCTT ACTATTTTGA GAAAGATGTA 
AAGGGGGAGT CCTTGTTCCA TTCATCTAAG AGCATGGACC TGAGGGTGAA CGGGGAGCTC 
CTCGATCTGG ACCCCGGGCA GACTCTGATT TACTACGTCG ATGAAAAGGC CCCGGAGTTT 
TCCATGCAGG GCCTCACGGC TGGGATCATC GCCGTCATTG TCGTGGTGGT GTTAGCAGTC 
ATTGCGGGGA TTGTTGTCCT GGTTATATCT ACAAGGAAGA GATCAGCAAA ATATGAGAAG 
GCTGAGATAA AGGAGATGGG TGAGATACAC AGAGAGCTCA ATGCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Epcam ( XM_017594027.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017449516.1 Rattus norvegicus epithelial cell adhesion molecule (Epcam), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa01613
Clone ID Related Accession (Same CDS sequence)	XM_017594027.1 , NM_138541.1
Accession Version	XM_017594027.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 948bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	epithelial cell adhesion molecule isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005105.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGCCCC CCAAGGCCCT CGCGTTCGGG CTCCTGCTCG CGGTGGTCAC GGCGACGCTG 
GCCGCAGCTC AGAAAGACTG TGTCTGTAAC AACTACAAGC TGACGTCACG GTGCTATGAG 
AATGAGAATG GTGAATGCCA GTGTACTTCC TATGGGACAC AAAATACTGT CATTTGCTCC 
AAACTGGCAT CCAAGTGCTT GGTGATGAAG GCGGAGATGA CTCACAGCAA GTCTGGGAGG 
AGGATGAAAC CCGAGGGGGC GATCCAGAAC AACGACGGTC TGTATGATCC CGAGTGTGAC 
GAGCAAGGGC TCTTCAAAGC CAAGCAGTGC AACGGCACCG CCACGTGCTG GTGCGTGAAC 
ACCGCGGGTG TCCGGAGAAC CGACAAGGAC ACGGAGATCA CGTGCTCCGA GAGAGTGAGG 
ACCTACTGGA TCATCATTGA GCTCAAACAC AAAGAAAGAG CACAGCCTTA TAACTTCGAG 
AGTTTGCATA CTGCACTTCA GGACACATTT GCATCTCGAT ACATGCTGAA TCCGAAATTT 
ATCAAAAGTA TTATGTATGA GAATAATGTT ATCACTATTG ATTTGATGCA AAACTCTTCT 
CAGAAGACTC AAGATGATGT GGACATAGCT GATGTGGCTT ACTATTTTGA GAAAGATGTA 
AAGGGGGAGT CCTTGTTCCA TTCATCTAAG AGCATGGACC TGAGGGTGAA CGGGGAGCTC 
CTCGATCTGG ACCCCGGGCA GACTCTGATT TACTACGTCG ATGAAAAGGC CCCGGAGTTT 
TCCATGCAGG GCCTCACGGC TGGGATCATC GCCGTCATTG TCGTGGTGGT GTTAGCAGTC 
ATTGCGGGGA TTGTTGTCCT GGTTATATCT ACAAGGAAGA GATCAGCAAA ATATGAGAAG 
GCTGAGATAA AGGAGATGGG TGAGATACAC AGAGAGCTCA ATGCCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017449516.1
CDS	441..1388
Translation	MAPPKALAFGLLLAVVTATLAAAQKDCVCNNYKLTSRCYENENGECQCTSYGTQNTVICSKLASKCLVMKAEMTHSKSGRRMKPEGAIQNNDGLYDPECDEQGLFKAKQCNGTATCWCVNTAGVRRTDKDTEITCSERVRTYWIIIELKHKERAQPYNFESLHTALQDTFASRYMLNPKFIKSIMYENNVITIDLMQNSSQKTQDDVDIADVAYYFEKDVKGESLFHSSKSMDLRVNGELLDLDPGQTLIYYVDEKAPEFSMQGLTAGIIAVIVVVVLAVIAGIVVLVISTRKRSAKYEKAEIKEMGEIHRELNA

Target ORF information:

RefSeq Version	XM_017594027.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus epithelial cell adhesion molecule (Epcam), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017594027.1

ORF Insert Sequence:

ATGGCGCCCC CCAAGGCCCT CGCGTTCGGG CTCCTGCTCG CGGTGGTCAC GGCGACGCTG 
GCCGCAGCTC AGAAAGACTG TGTCTGTAAC AACTACAAGC TGACGTCACG GTGCTATGAG 
AATGAGAATG GTGAATGCCA GTGTACTTCC TATGGGACAC AAAATACTGT CATTTGCTCC 
AAACTGGCAT CCAAGTGCTT GGTGATGAAG GCGGAGATGA CTCACAGCAA GTCTGGGAGG 
AGGATGAAAC CCGAGGGGGC GATCCAGAAC AACGACGGTC TGTATGATCC CGAGTGTGAC 
GAGCAAGGGC TCTTCAAAGC CAAGCAGTGC AACGGCACCG CCACGTGCTG GTGCGTGAAC 
ACCGCGGGTG TCCGGAGAAC CGACAAGGAC ACGGAGATCA CGTGCTCCGA GAGAGTGAGG 
ACCTACTGGA TCATCATTGA GCTCAAACAC AAAGAAAGAG CACAGCCTTA TAACTTCGAG 
AGTTTGCATA CTGCACTTCA GGACACATTT GCATCTCGAT ACATGCTGAA TCCGAAATTT 
ATCAAAAGTA TTATGTATGA GAATAATGTT ATCACTATTG ATTTGATGCA AAACTCTTCT 
CAGAAGACTC AAGATGATGT GGACATAGCT GATGTGGCTT ACTATTTTGA GAAAGATGTA 
AAGGGGGAGT CCTTGTTCCA TTCATCTAAG AGCATGGACC TGAGGGTGAA CGGGGAGCTC 
CTCGATCTGG ACCCCGGGCA GACTCTGATT TACTACGTCG ATGAAAAGGC CCCGGAGTTT 
TCCATGCAGG GCCTCACGGC TGGGATCATC GCCGTCATTG TCGTGGTGGT GTTAGCAGTC 
ATTGCGGGGA TTGTTGTCCT GGTTATATCT ACAAGGAAGA GATCAGCAAA ATATGAGAAG 
GCTGAGATAA AGGAGATGGG TGAGATACAC AGAGAGCTCA ATGCCTAA