Pou6f1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pou6f1
Entrez Gene ID	116545
Full Name	POU class 6 homeobox 1
Synonyms	Brn5
General protein information	Preferred Names POU class 6 homeobox 1 Names POU domain, class 6, transcription factor 1 brain-5 brain-specific homeobox/POU domain protein 5 brn-5 protein
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 7 Map Location: 7q36
Summary	binds a variant octomer core motif DNA sequence; may act as a transcriptional activator [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_017594570.1	XP_017450059.1	POU domain, class 6, transcription factor 1 isoform X1
XM_017594571.1	XP_017450060.1	POU domain, class 6, transcription factor 1 isoform X1
NM_001105746.1	NP_001099216.1	POU domain, class 6, transcription factor 1
XM_017594569.1	XP_017450058.1	POU domain, class 6, transcription factor 1 isoform X1
XM_017594572.1	XP_017450061.1	POU domain, class 6, transcription factor 1 isoform X2

Pathways from BioSystems

Homologies

Macaca mulatta (Rhesus monkey)	LOC694640	XP_001083309.1
Mus musculus (house mouse)	Pou6f1	NP_034257.1
Rattus norvegicus (Norway rat)	Pou6f1	NP_001099216.1
Xenopus tropicalis (tropical clawed frog)	pou6f1	NP_001103520.2
Canis lupus familiaris (dog)	POU6F1	XP_003433575.1
Danio rerio (zebrafish)	pou6f1	NP_571188.1
Pan troglodytes (chimpanzee)	POU6F1	XP_001148929.1
Bos taurus (cattle)	POU6F1	XP_002687314.2
Homo sapiens (human)	POU6F1	NP_002693.3

Gene Ontology
Bibliography

Related articles in PubMed

Involvement of mPOU (Brn-5), a class VI POU protein, in the gene expression of Pit-1 as well as PRL.
Toda K, Yamamoto D, Fumoto M, Ikeshita N, Herningtyas EH, Iida K, Takahashi Y, Kaji H, Chihara K, Okimura Y
Molecular and cellular endocrinology280(1-2)20-9(2008 Jan)

A novel complex regulates cardiac actin gene expression through interaction of Emb, a class VI POU domain protein, MEF2D, and the histone transacetylase p300.
Molinari S, Relaix F, Lemonnier M, Kirschbaum B, Schäfer B, Buckingham M
Molecular and cellular biology24(7)2944-57(2004 Apr)

Expression of the POU transcription factor Brn-5 is an early event in the terminal differentiation of CNS neurons.
Cui H, Bulleit RF
Journal of neuroscience research52(6)625-32(1998 Jun)

Identification of novel DNA binding sites recognized by the transcription factor mPOU (POU6F1).
Wey E, Schäfer BW
Biochemical and biophysical research communications220(2)274-9(1996 Mar)

A novel class of murine POU gene predominantly expressed in central nervous system.
Okamoto K, Wakamiya M, Noji S, Koyama E, Taniguchi S, Takemura R, Copeland NG, Gilbert DJ, Jenkins NA, Muramatsu M
The Journal of biological chemistry268(10)7449-57(1993 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pou6f1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pou6f1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa11908	NM_001105746.1 Latest version!	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa11908	XM_017594571.1 Latest version!	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa11908	XM_017594570.1 Latest version!	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa11908	XM_017594569.1 Latest version!	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa61835	XM_017594572.1 Latest version!	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X5, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pou6f1 ( NM_001105746.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001099216.1 Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), mRNA.

Price & Availability↑

CloneID	ORa11908
Clone ID Related Accession (Same CDS sequence)	XM_017594570.1 , XM_017594571.1 , NM_001105746.1 , XM_017594569.1
Accession Version	NM_001105746.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1577203200000
Organism	Rattus norvegicus(Norway rat)
Product	POU domain, class 6, transcription factor 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CH474035.2. On or before Oct 3, 2007 this sequence version replaced XM_343334.3, XM_001064836.1. ##Evidence-Data-START## Transcript exon combination :: L23204.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001099216.1
CDS	801..1706
Translation	MPGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP

Target ORF information:

RefSeq Version	NM_001105746.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001105746.1

ORF Insert Sequence:

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Pou6f1 ( XM_017594570.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017450059.1 Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa11908
Clone ID Related Accession (Same CDS sequence)	XM_017594570.1 , XM_017594571.1 , NM_001105746.1 , XM_017594569.1
Accession Version	XM_017594570.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	POU domain, class 6, transcription factor 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017450059.1
CDS	174..1079
Translation	MPGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP

Target ORF information:

RefSeq Version	XM_017594570.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017594570.1

ORF Insert Sequence:

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Pou6f1 ( XM_017594571.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017450060.1 Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa11908
Clone ID Related Accession (Same CDS sequence)	XM_017594570.1 , XM_017594571.1 , NM_001105746.1 , XM_017594569.1
Accession Version	XM_017594571.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	POU domain, class 6, transcription factor 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017450060.1
CDS	587..1492
Translation	MPGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP

Target ORF information:

RefSeq Version	XM_017594571.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017594571.1

ORF Insert Sequence:

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Pou6f1 ( XM_017594569.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017450058.1 Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa11908
Clone ID Related Accession (Same CDS sequence)	XM_017594570.1 , XM_017594571.1 , NM_001105746.1 , XM_017594569.1
Accession Version	XM_017594569.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	POU domain, class 6, transcription factor 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017450058.1
CDS	318..1223
Translation	MPGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP

Target ORF information:

RefSeq Version	XM_017594569.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017594569.1

ORF Insert Sequence:

ATGCCCGGGA TCAGCAGTCC GATCCTCACC AATGCTCAGG GACAGGTTAT TGGAGCACTT 
CCATGGGTAG TGAACTCAGC CAGTGTGGCC ACACCAGCAC CAGCACAGAG CCTGCAGGTC 
CAAGCTGTGA CTCCCCAGCT CTTGTTGAAT GCCCAGGGCC AGGTGATCGC AACACTAGCC 
AGCAGCCCCC TGCCTCAACC TGTGGCTGTC CGGAAGCCAA GCACACCGGA GTCCCCTGCA 
AAGAGTGAGG TGCAACCCAT CCAGCCGACA CAAGCCGTGC CCCCACCTGC TGTAATCCTC 
ACCAGCCCAG CTCCAGCACT CAAGCCATCA GCCTCAGCTC CCATCCCAAT CACCTGCTCA 
GAGACACCTA CAGTCAGTCA GTTGGTATCA AAACCGCACA CTCCGAGTCT GGATGAGGAC 
GGGATCAACT TAGAAGAGAT CCGGGAGTTT GCCAAGAATT TTAAGATCCG GAGGCTCTCC 
CTGGGTCTGA CACAGACCCA GGTGGGCCAG GCTCTGACCG CAACAGAGGG GCCAGCCTAC 
AGCCAATCAG CCATCTGCAG GTTCGAGAAG TTAGACATCA CACCCAAGAG TGCCCAGAAG 
CTGAAGCCGG TTTTGGAAAA GTGGTTGAAC GAGGCAGAGC TCCGGAACCA GGAAGGCCAG 
CAGAATCTGA TGGAGTTTGT GGGCGGCGAG CCCTCCAAGA AACGCAAGCG GCGTACTTCC 
TTCACACCAC AGGCCATAGA GGCTCTCAAT GCCTACTTTG AGAAAAACCC CCTGCCCACC 
GGCCAGGAGA TCACCGAGAT CGCTAAGGAG CTCAACTATG ACCGTGAGGT GGTGAGGGTC 
TGGTTCTGTA ATCGACGCCA GACACTCAAG AACACCAGCA AGCTGAATGT CTTTCAGATC 
CCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Pou6f1 ( XM_017594572.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017450061.1 Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X5, mRNA.

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CloneID	ORa61835
Clone ID Related Accession (Same CDS sequence)	XM_017594572.1
Accession Version	XM_017594572.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1740bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	POU domain, class 6, transcription factor 1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005106.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGATGCTG GAGCTGGATC TGACTCATCT CTGACTGTCA ATGAGCAGGT CATCGTGATG 
TCAGGCCACG AGACCATCCG CGTGTTGGAA GTTGGAGTGG ATGCCCAGCT CCCAGCTGAG 
GAGGAGAGCA AAGGACTGGA GAGTGTGGCA GCTGATGGCT CCCAGAGTGG GGGCCCTGCT 
GAAGCCAGGG GCCCTGCTGG GGAAGCTGGG TCATGTGACC CAGACCATTC TGCAGAAGCA 
ACAGTGAAGT CACTGCCCGG AATCCCTCCG AGTCCTGCCC CAGCCATCGC TACCCTCAGC 
CAAGCCCCAA GCCAGCCTCA GGCATCACAG ACCCTGACAC CACTGGCCGT TCAAGCTGCC 
CCCCAGGGTC AAGTGGCTGG GCAGCAGGGG CTGGCCGTGT GGACCATCCC TACAGCAACT 
GTGGCTGCCC TCCCAGGACT GACTGCGGCC TCTCCCACGG GGGGAGCTTT CAAGCCACCT 
TTAGCTGGTC TCCAAGCAGC TGCCGTGCTG AACACCGCCC TCCCGACACC TGTACAAGCT 
GCCCCACCAG TCCAGGCCTC CTCGCCCGCC CAGCCCCGGC CACCAGCTCA GCCCCAGACG 
CTGTTCCAGA CCCAGCAGCT GCTACAGACC ACGCCGGCCA TACTCCCACA GCCTACTGTT 
GCCACCGTTG CTGCCCCCAC CCCCAAGCCA GTGGATGCTG CCCCACAGAT CACCGTCCAG 
CCTGCAGGCT TCGCTTTTAG CCCAGGGATC ATCAGTGCCG CGTCCCTTGG GGGACAGACG 
CAAATCCTGG GCTCCCTCAC TACAGCTCCA GTTATTACCA ACACCATTCC CAGCATGCCC 
GGGATCAGCA GTCCGATCCT CACCAATGCT CAGGGACAGG TTATTGGAGC ACTTCCATGG 
GTAGTGAACT CAGCCAGTGT GGCCACACCA GCACCAGCAC AGAGCCTGCA GGTCCAAGCT 
GTGACTCCCC AGCTCTTGTT GAATGCCCAG GGCCAGGTGA TCGCAACACT AGCCAGCAGC 
CCCCTGCCTC AACCTGTGGC TGTCCGGAAG CCAAGCACAC CGGAGTCCCC TGCAAAGAGT 
GAGGTGCAAC CCATCCAGCC GACACAAGCC GTGCCCCCAC CTGCTGTAAT CCTCACCAGC 
CCAGCTCCAG CACTCAAGCC ATCAGCCTCA GCTCCCATCC CAATCACCTG CTCAGAGACA 
CCTACAGTCA GTCAGTTGGT ATCAAAACCG CACACTCCGA GTCTGGATGA GGACGGGATC 
AACTTAGAAG AGATCCGGGA GTTTGCCAAG AATTTTAAGA TCCGGAGGCT CTCCCTGGGT 
CTGACACAGA CCCAGGTGGG CCAGGCTCTG ACCGCAACAG AGGGGCCAGC CTACAGCCAA 
TCAGCCATCT GCAGGTTCGA GAAGTTAGAC ATCACACCCA AGAGTGCCCA GAAGCTGAAG 
CCGGTTTTGG AAAAGTGGTT GAACGAGGCA GAGCTCCGGA ACCAGGAAGG CCAGCAGAAT 
CTGATGGAGT TTGTGGGCGG CGAGCCCTCC AAGAAACGCA AGCGGCGTAC TTCCTTCACA 
CCACAGGCCA TAGAGGCTCT CAATGCCTAC TTTGAGAAAA ACCCCCTGCC CACCGGCCAG 
GAGATCACCG AGATCGCTAA GGAGCTCAAC TATGACCGTG AGGTGGTGAG GGTCTGGTTC 
TGTAATCGAC GCCAGACACT CAAGAACACC AGCAAGCTGA ATGTCTTTCA GATCCCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017450061.1
CDS	1323..3062
Translation	MDAGAGSDSSLTVNEQVIVMSGHETIRVLEVGVDAQLPAEEESKGLESVAADGSQSGGPAEARGPAGEAGSCDPDHSAEATVKSLPGIPPSPAPAIATLSQAPSQPQASQTLTPLAVQAAPQGQVAGQQGLAVWTIPTATVAALPGLTAASPTGGAFKPPLAGLQAAAVLNTALPTPVQAAPPVQASSPAQPRPPAQPQTLFQTQQLLQTTPAILPQPTVATVAAPTPKPVDAAPQITVQPAGFAFSPGIISAASLGGQTQILGSLTTAPVITNTIPSMPGISSPILTNAQGQVIGALPWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPSTPESPAKSEVQPIQPTQAVPPPAVILTSPAPALKPSASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP

Target ORF information:

RefSeq Version	XM_017594572.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus POU class 6 homeobox 1 (Pou6f1), transcript variant X5, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017594572.1

ORF Insert Sequence:

ATGGATGCTG GAGCTGGATC TGACTCATCT CTGACTGTCA ATGAGCAGGT CATCGTGATG 
TCAGGCCACG AGACCATCCG CGTGTTGGAA GTTGGAGTGG ATGCCCAGCT CCCAGCTGAG 
GAGGAGAGCA AAGGACTGGA GAGTGTGGCA GCTGATGGCT CCCAGAGTGG GGGCCCTGCT 
GAAGCCAGGG GCCCTGCTGG GGAAGCTGGG TCATGTGACC CAGACCATTC TGCAGAAGCA 
ACAGTGAAGT CACTGCCCGG AATCCCTCCG AGTCCTGCCC CAGCCATCGC TACCCTCAGC 
CAAGCCCCAA GCCAGCCTCA GGCATCACAG ACCCTGACAC CACTGGCCGT TCAAGCTGCC 
CCCCAGGGTC AAGTGGCTGG GCAGCAGGGG CTGGCCGTGT GGACCATCCC TACAGCAACT 
GTGGCTGCCC TCCCAGGACT GACTGCGGCC TCTCCCACGG GGGGAGCTTT CAAGCCACCT 
TTAGCTGGTC TCCAAGCAGC TGCCGTGCTG AACACCGCCC TCCCGACACC TGTACAAGCT 
GCCCCACCAG TCCAGGCCTC CTCGCCCGCC CAGCCCCGGC CACCAGCTCA GCCCCAGACG 
CTGTTCCAGA CCCAGCAGCT GCTACAGACC ACGCCGGCCA TACTCCCACA GCCTACTGTT 
GCCACCGTTG CTGCCCCCAC CCCCAAGCCA GTGGATGCTG CCCCACAGAT CACCGTCCAG 
CCTGCAGGCT TCGCTTTTAG CCCAGGGATC ATCAGTGCCG CGTCCCTTGG GGGACAGACG 
CAAATCCTGG GCTCCCTCAC TACAGCTCCA GTTATTACCA ACACCATTCC CAGCATGCCC 
GGGATCAGCA GTCCGATCCT CACCAATGCT CAGGGACAGG TTATTGGAGC ACTTCCATGG 
GTAGTGAACT CAGCCAGTGT GGCCACACCA GCACCAGCAC AGAGCCTGCA GGTCCAAGCT 
GTGACTCCCC AGCTCTTGTT GAATGCCCAG GGCCAGGTGA TCGCAACACT AGCCAGCAGC 
CCCCTGCCTC AACCTGTGGC TGTCCGGAAG CCAAGCACAC CGGAGTCCCC TGCAAAGAGT 
GAGGTGCAAC CCATCCAGCC GACACAAGCC GTGCCCCCAC CTGCTGTAAT CCTCACCAGC 
CCAGCTCCAG CACTCAAGCC ATCAGCCTCA GCTCCCATCC CAATCACCTG CTCAGAGACA 
CCTACAGTCA GTCAGTTGGT ATCAAAACCG CACACTCCGA GTCTGGATGA GGACGGGATC 
AACTTAGAAG AGATCCGGGA GTTTGCCAAG AATTTTAAGA TCCGGAGGCT CTCCCTGGGT 
CTGACACAGA CCCAGGTGGG CCAGGCTCTG ACCGCAACAG AGGGGCCAGC CTACAGCCAA 
TCAGCCATCT GCAGGTTCGA GAAGTTAGAC ATCACACCCA AGAGTGCCCA GAAGCTGAAG 
CCGGTTTTGG AAAAGTGGTT GAACGAGGCA GAGCTCCGGA ACCAGGAAGG CCAGCAGAAT 
CTGATGGAGT TTGTGGGCGG CGAGCCCTCC AAGAAACGCA AGCGGCGTAC TTCCTTCACA 
CCACAGGCCA TAGAGGCTCT CAATGCCTAC TTTGAGAAAA ACCCCCTGCC CACCGGCCAG 
GAGATCACCG AGATCGCTAA GGAGCTCAAC TATGACCGTG AGGTGGTGAG GGTCTGGTTC 
TGTAATCGAC GCCAGACACT CAAGAACACC AGCAAGCTGA ATGTCTTTCA GATCCCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Involvement of mPOU (Brn-5), a class VI POU protein, in the gene expression of Pit-1 as well as PRL.
Molecular and cellular endocrinology280(1-2)20-9(2008 Jan)
Toda K,Yamamoto D,Fumoto M,Ikeshita N,Herningtyas EH,Iida K,Takahashi Y,Kaji H,Chihara K,Okimura Y

A novel complex regulates cardiac actin gene expression through interaction of Emb, a class VI POU domain protein, MEF2D, and the histone transacetylase p300.
Molecular and cellular biology24(7)2944-57(2004 Apr)
Molinari S,Relaix F,Lemonnier M,Kirschbaum B,Schäfer B,Buckingham M

Expression of the POU transcription factor Brn-5 is an early event in the terminal differentiation of CNS neurons.
Journal of neuroscience research52(6)625-32(1998 Jun)
Cui H,Bulleit RF

Identification of novel DNA binding sites recognized by the transcription factor mPOU (POU6F1).
Biochemical and biophysical research communications220(2)274-9(1996 Mar)
Wey E,Schäfer BW

A novel class of murine POU gene predominantly expressed in central nervous system.
The Journal of biological chemistry268(10)7449-57(1993 Apr)
Okamoto K,Wakamiya M,Noji S,Koyama E,Taniguchi S,Takemura R,Copeland NG,Gilbert DJ,Jenkins NA,Muramatsu M

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Pou6f1 cDNA ORF clone, Rattus norvegicus(Norway rat)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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