| Gene Symbol | Snrpa1 |
| Entrez Gene ID | 100361269 |
| Full Name | small nuclear ribonucleoprotein polypeptide A' |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Rattus norvegicus(Norway rat) |
| Genome |
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Snrpa1 cDNA ORF clone, Rattus norvegicus(Norway rat)
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Gene
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Clones
gRNAs
The following Snrpa1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Snrpa1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ORa10992 Clone ID Related Accession (Same CDS sequence) NM_001271323.1 Accession Version NM_001271323.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 768bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1555516800000 Organism Rattus norvegicus(Norway rat) Product U2 small nuclear ribonucleoprotein A' Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AABR07004139.1 and FM044635.1. On or before Sep 16, 2012 this sequence version replaced XM_002728764.2, XM_003753290.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: FQ232647.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721ATGGTGAAGC TGACGGCGGA GCTGATCGAG CAGGCGGCAC AGTACACCAA TGCTGTGCGG
GACCGTGAGC TGGACCTCCG CGGATATAAA ATTCCTGTTA TTGAAAATCT GGGTGCCACC
TTAGACCAGT TTGATGCTAT TGATTTTTCT GACAATGAGA TCAGGAAACT GGATGGCTTT
CCGTTGTTGA GAAGACTGAA AACATTATTA GTGAACAACA ACAGAATTTG CCGTATAGGT
GAGGGTCTCG ATCAGGCTCT TCCCTGCCTG ACAGAACTCA TTCTCACCAA CAACAGTCTA
GTGGAACTGG GTGATCTGGA CCCATTGGCA TCTCTCAAAT CACTGACATA TCTAAGCATC
CTAAGAAACC CTGTGACCAA TAAGAAGCAT TATCGACTCT ATGTGATTTA TAAGGTTCCA
CAAGTCAGAG TACTGGACTT TCAGAAAGTG AAACTAAAAG AGCGTCAGGA AGCAGAGAAA
ATGTTCAAGG GCAAACGGGG TGCACAGCTT GCAAAGGATA TTGCCAGGAG AAGCAAAACT
TTTAATCCAG GTGCTGGTTT GCCAACTGAC AAAAAGAAAG GTGGGCCATC TGCAGGGGAT
GTGGAAGCAA TCAAGAATGC CATAGCAAAC GCGTCAACAC TGGCTGAAGT TGAGAGGCTG
AAGGGCTTGC TGCAGTCTGG CCAGATTCCT GGCAGAGAGC GCAGATCAGG GCCGAGTGAT
GAGGGTGAAG AGGAGATGGA AGACGGCACA GTCACAAATG GGTCCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001258252.1 CDS 71..838 Translation 
Target ORF information:
RefSeq Version NM_001271323.1 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus small nuclear ribonucleoprotein polypeptide A' (Snrpa1), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_001271323.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721ATGGTGAAGC TGACGGCGGA GCTGATCGAG CAGGCGGCAC AGTACACCAA TGCTGTGCGG
GACCGTGAGC TGGACCTCCG CGGATATAAA ATTCCTGTTA TTGAAAATCT GGGTGCCACC
TTAGACCAGT TTGATGCTAT TGATTTTTCT GACAATGAGA TCAGGAAACT GGATGGCTTT
CCGTTGTTGA GAAGACTGAA AACATTATTA GTGAACAACA ACAGAATTTG CCGTATAGGT
GAGGGTCTCG ATCAGGCTCT TCCCTGCCTG ACAGAACTCA TTCTCACCAA CAACAGTCTA
GTGGAACTGG GTGATCTGGA CCCATTGGCA TCTCTCAAAT CACTGACATA TCTAAGCATC
CTAAGAAACC CTGTGACCAA TAAGAAGCAT TATCGACTCT ATGTGATTTA TAAGGTTCCA
CAAGTCAGAG TACTGGACTT TCAGAAAGTG AAACTAAAAG AGCGTCAGGA AGCAGAGAAA
ATGTTCAAGG GCAAACGGGG TGCACAGCTT GCAAAGGATA TTGCCAGGAG AAGCAAAACT
TTTAATCCAG GTGCTGGTTT GCCAACTGAC AAAAAGAAAG GTGGGCCATC TGCAGGGGAT
GTGGAAGCAA TCAAGAATGC CATAGCAAAC GCGTCAACAC TGGCTGAAGT TGAGAGGCTG
AAGGGCTTGC TGCAGTCTGG CCAGATTCCT GGCAGAGAGC GCAGATCAGG GCCGAGTGAT
GAGGGTGAAG AGGAGATGGA AGACGGCACA GTCACAAATG GGTCCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID ORa22867 Clone ID Related Accession (Same CDS sequence) XM_006229323.3 Accession Version XM_006229323.3 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 699bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1469376000000 Organism Rattus norvegicus(Norway rat) Product U2 small nuclear ribonucleoprotein A' isoform X1 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005100.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006229323.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661ATGGCACGCG AGGGATATAA AATTCCTGTT ATTGAAAATC TGGGTGCCAC CTTAGACCAG
TTTGATGCTA TTGATTTTTC TGACAATGAG ATCAGGAAAC TGGATGGCTT TCCGTTGTTG
AGAAGACTGA AAACATTATT AGTGAACAAC AACAGAATTT GCCGTATAGG TGAGGGTCTC
GATCAGGCTC TTCCCTGCCT GACAGAACTC ATTCTCACCA ACAACAGTCT AGTGGAACTG
GGTGATCTGG ACCCATTGGC ATCTCTCAAA TCACTGACAT ATCTAAGCAT CCTAAGAAAC
CCTGTGACCA ATAAGAAGCA TTATCGACTC TATGTGATTT ATAAGGTTCC ACAAGTCAGA
GTACTGGACT TTCAGAAAGT GAAACTAAAA GAGCGTCAGG AAGCAGAGAA AATGTTCAAG
GGCAAACGGG GTGCACAGCT TGCAAAGGAT ATTGCCAGGA GAAGCAAAAC TTTTAATCCA
GGTGCTGGTT TGCCAACTGA CAAAAAGAAA GGTGGGCCAT CTGCAGGGGA TGTGGAAGCA
ATCAAGAATG CCATAGCAAA CGCGTCAACA CTGGCTGAAG TTGAGAGGCT GAAGGGCTTG
CTGCAGTCTG GCCAGATTCC TGGCAGAGAG CGCAGATCAG GGCCGAGTGA TGAGGGTGAA
GAGGAGATGG AAGACGGCAC AGTCACAAAT GGGTCCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_006229385.1 CDS 295..993 Translation
Target ORF information:
RefSeq Version XM_006229323.3 Organism Rattus norvegicus(Norway rat) Definition Rattus norvegicus small nuclear ribonucleoprotein polypeptide A' (Snrpa1), transcript variant X1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_006229323.3
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661ATGGCACGCG AGGGATATAA AATTCCTGTT ATTGAAAATC TGGGTGCCAC CTTAGACCAG
TTTGATGCTA TTGATTTTTC TGACAATGAG ATCAGGAAAC TGGATGGCTT TCCGTTGTTG
AGAAGACTGA AAACATTATT AGTGAACAAC AACAGAATTT GCCGTATAGG TGAGGGTCTC
GATCAGGCTC TTCCCTGCCT GACAGAACTC ATTCTCACCA ACAACAGTCT AGTGGAACTG
GGTGATCTGG ACCCATTGGC ATCTCTCAAA TCACTGACAT ATCTAAGCAT CCTAAGAAAC
CCTGTGACCA ATAAGAAGCA TTATCGACTC TATGTGATTT ATAAGGTTCC ACAAGTCAGA
GTACTGGACT TTCAGAAAGT GAAACTAAAA GAGCGTCAGG AAGCAGAGAA AATGTTCAAG
GGCAAACGGG GTGCACAGCT TGCAAAGGAT ATTGCCAGGA GAAGCAAAAC TTTTAATCCA
GGTGCTGGTT TGCCAACTGA CAAAAAGAAA GGTGGGCCAT CTGCAGGGGA TGTGGAAGCA
ATCAAGAATG CCATAGCAAA CGCGTCAACA CTGGCTGAAG TTGAGAGGCT GAAGGGCTTG
CTGCAGTCTG GCCAGATTCC TGGCAGAGAG CGCAGATCAG GGCCGAGTGA TGAGGGTGAA
GAGGAGATGG AAGACGGCAC AGTCACAAAT GGGTCCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation.
Cell170(4)701-713.e11(2017 Aug)
Bertram K,Agafonov DE,Dybkov O,Haselbach D,Leelaram MN,Will CL,Urlaub H,Kastner B,Lührmann R,Stark H
Cryo-EM structure of a human spliceosome activated for step 2 of splicing.
Nature542(7641)318-323(2017 02)
Bertram K,Agafonov DE,Liu WT,Dybkov O,Will CL,Hartmuth K,Urlaub H,Kastner B,Stark H,Lührmann R
Major spliceosome defects cause male infertility and are associated with nonobstructive azoospermia in humans.
Proceedings of the National Academy of Sciences of the United States of America113(15)4134-9(2016 Apr)
Wu H,Sun L,Wen Y,Liu Y,Yu J,Mao F,Wang Y,Tong C,Guo X,Hu Z,Sha J,Liu M,Xia L
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanhäusser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
Nucleic acids research35(12)3928-44(2007)
Chen YI,Moore RE,Ge HY,Young MK,Lee TD,Stevens SW
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