LOC7494030 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC7494030
Entrez Gene ID	7494030
Full Name	PHOSPHOLIPASE D BETA 1 family protein
Synonyms	POPTRDRAFT_755219
Gene Type	protein-coding
Organism	Populus trichocarpa(black cottonwood)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002301281.2	XP_002301317.2	PHOSPHOLIPASE D BETA 1 family protein
XM_002301281.3	XP_002301317.3	phospholipase D beta 2

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC7494030 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7494030 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPa06538	XM_002301281.2 Latest version!	Populus trichocarpa PHOSPHOLIPASE D BETA 1 family protein (POPTR_0002s15350g) mRNA, complete cds.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPa423593	XM_002301281.3 Latest version!	Populus trichocarpa phospholipase D beta 2 (LOC7494030), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC7494030 ( XM_002301281.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301317.2 Populus trichocarpa PHOSPHOLIPASE D BETA 1 family protein (POPTR_0002s15350g) mRNA, complete cds.

Price & Availability↑

CloneID	OPa06538
Clone ID Related Accession (Same CDS sequence)	XM_002301281.2
Accession Version	XM_002301281.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3444bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1388332800000
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Product	PHOSPHOLIPASE D BETA 1 family protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301281.1. COMPLETENESS: incomplete on the 5' end.

ATGGATAATG ATCATGGCTC TCCATACCCT TATAACAATC CATATCCATA CCCTCACCAT 
CCTCCTCCTC CTCCTCCAAA TTATGGGTGT CCACCTTCAG ATCCATGCTA TCCTCCTCAT 
CCCTATCCTC CATACCCTCC ATACGGTGCT TACGCATATC CACCACCACC ACACTCACCA 
TCGCATTCAG GGCCTTTAGA TTATTCTCAC CAAAATCCTT CAGCACCATA TCTAACAAGC 
CATTCAGGGC CTTTAGACTA TTCACACAAT CCTTCAAAAC CACAACCAAC TAGTCTTTCG 
GGTTCTTTAG ACTATTCTCA ACACCAACCA CCATCACCAC ATCCAATAAC GAATTCGGGA 
CCTTTAGATT TTAATCGCCA CTATTCTGGT CCTTTAGCAA CATCACCATA TGCTGCATAT 
CCACCAGTAC CTCATGTTTC AAATTCAATC CTTCATAATT ACCCTTTTGC TCAACCTCAG 
TCGAGCCAAT ATCCTTCTAT TGATAGCATT TCACAATCGC CCTCTAGGGC TAATAGCTTT 
TCCGGTATTC ATAGACAAGA TAGTTCTTCA TCTTTAGGAA TTGGATCATC TTCATCAAAT 
CCCGATAAAG TTGATGCTGC TGTTGCTGGT ACTTCTTCTG CATATCCACC TTTGGATGAT 
TTAATAAGTA ATTTGCATTT GAATGATACG AATAATCATC CTACTGCCCC TGCTTCCCTA 
CCAGCTCCTC CAGTACCTTC AGTGCCTTAT TCCCCTCAAA GCTATCAGGG CTCTAGTTTT 
GGACATGCCC CCCCACACGA ATTATATGGT TATCCTAATG ACTCATTTTC AATTAATTGG 
GAGGAGAATT ATGCGGGCAA AGTTGATTCG TCTGGTCACT ATCCTGCCTC TCCTTATGCG 
CATTCATCCT CCTTTAATGG ATCACAGCAT GGCCAAAGTA TGGAGGTTGT GCCAGTGTCG 
AGTGGTAAAG GGTCGTCTTT GAAGGTTTTG CTCTTACACG GGAATTTGGA TATTTGTGTT 
TATGATGCAA AGAATCTCCC AAACATGGAC ATTTTCCACA AGACTTTGGG TGATATGTTC 
AACAAATTAC CTGGAAGTAT AAGTAGCAAG ATTGAAGGAC AAGTGTACAC CAAGATTACC 
AGCGACCCTT ATGTTTCAAT TTCAGTAGCT GGTGCTGTGA TTGGGAGGAC TTTTGTGATT 
AGCAATAGTG AAAATCCTGA ATGGACGCAG CATTTTTATG TTCCTGTTGC ACATTCCGCT 
GCAGAAGTGC GTTTTGTTGT TAAAGACAGT GATGTTCTGG GGTCGCAGTT GATAGGAGTT 
GTGGCACTTC CAGTTGAACA GATATATTCA GGGGCAAGAA TTGAGGGAGT TTACCCTATT 
TTGAATAACA ACGGAAAACA ATGTAAGCCT GGTGCTTCTT TGAGAATTTC AATTCAGTAC 
ATGCCCATAG AGAAACTGGG CATTTATCAA CATGGTGTTG GTGCTGGTCC TGATTATCAT 
GGTGTGCCTG GTACCTATTT TCCTCTTAGG AAAGGTGGAA CAGTTACTCT TTATCAAGAT 
GCCCATGTTC CTGACGGGAG CCTTCCAAAT GTGCAACTTG ATAACGGGAT GCCTTATCTG 
CATGGAAAGT GCTGGCAAGA TATCTTTGAT GCTATACGTC AAGCCCGGCG TTTAATTTAC 
ATTACCGGGT GGTCTGTATG GCACAAAGTT GCTCTGGTCC GGGATGGTGG TCAGCATTCA 
GGTGTGCCCC TTGGGGATCT TCTGAGGTCC AAGTCCCAGG AAGGCGTAAG AGTTCTGCTT 
CTTCTTTGGG ATGATCCTAC TTCAAGGAAT GTCTTGGGAT ATAAAACAGA TGGAATTATG 
GCAACCCATG ATGAGGAAAC TCGCCGCTTT TTCAAACGCT CATCAGTTCA AGTGCTGCTT 
TGTCCTCGCA TTGCTGGGAA AAAACATAGC TGGGTCAAGC AAAGGGAGGT CGGAACAATT 
TATACACATC ATCAGAAAAC TGTAATTGTT GATGCTGATG CTGGCAATAA TAGAAGAAAA 
ATCATAGCCT TTGTTGGTGG ACTTGATTTA TGTGATGGTC GATATGATAA TCCTGATCAC 
TCTCTATTTA GGACACTACA AACTGTTCAC AAAGATGACT ATCACAACCC TACTTTCACT 
GGTAGTGTCG CAAATTGCCA AAGAGAACCA TGGCATGACT TGCACAGCAG AATAGATGGT 
CCAGCAGCGT ATGATGTTCT AACTAACTTT GAGGACCGTT GGATGAAGGC TGCAAAACCT 
AAGGGCCTTA GAAAACTAAA AACATCATAT GATGATGCTT TACTCAGGAT TGACAGAATT 
CCAGACATTA TAGGTGTTTT TGATGCTCTT TCCATTAGTG AGGATGACCC TGAAGCTTGG 
CATGTTCAGA TTTTTCGTTC AATTGATTCA AACTCTGTGA AAGACTTCCC AAAGGATCCG 
AAGGATGCCC CGAAAAAGAA CCTGGTGTGT GGAAAGAATG TGCTCATTGA CATGAGCATA 
CATACAGCAT ATGTGAAGGC CATTCGTGCT GCCCAACATT TTATTTACAT AGAGAACCAG 
TATTTTATTG GGTCCTCGTA CAACTGGGGT TCATATAAAG ATTTAGGGGC TAATAATTTG 
ATTCCTATGG AAATTGCACT AAAGATTGCC AATAAAATCA GAGCGAATGA GAGATTTGCT 
GCCTACATTA TTGTTCCGAT GTGGCCAGAG GGTGTTCCAA CCGGTGCTGC CACGCAAAGG 
ATTTTGTTTT GGCAGCATAA AACTATGCAA ATGATGTATG AGACAATTTA CAAGGCCCTA 
GACGAGGTTG GACTTGAGGA TGCATTCTCA TCACAGGATT TTTTGAACTT CTTCTGTCTT 
GGTAATCGTG AAGCTGTAGA TGAATCCAAC TCTTCAGGGA TGCCAACTCC TTCAAGTTCT 
CCCATTCCTC AGGCACTTTG TCAGAAAAGC CGGCGGTTCA TGATTTATGT TCATTCGAAA 
GGGATGATAG TTGATGATGA GTATGTAATA CTAGGATCTG CAAACATAAA TCAGCGTTCA 
ATGGAGGGCA CTAGAGACAC TGAGATTGCA ATGGGAGCCT ACCAACCTCA ACATACCTGG 
GCAAGAAAAC AATCTAATCC GCTTGGACAG ATCCATGGAT ATCGGATGTC TCTCTGGGCA 
GAGCATACTG GAGTTATTGA GGACTCCTTT ACAAAACCTG AGAGTCTTGA ATGTGTTAGG 
AGAATTAGAA CAATGGGGGA GATGAACTGG AAACAATTTG CTGCTGAGGA GGTTTCAGAG 
ATGAGAGGGC ACCTGCTAAA GTACCCGGTT GAAGTTGATC GAAAGGGCAA GGTGAGGCCT 
ATCCCTGGAT CTGAAACTTT CCCAGATGTC GGAGGAAATA TAACGGGTTC GTTTCTTGCA 
ATTCAGGAGA ATCTGACTAT CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002301317.2
CDS	1..3444
Translation	MDNDHGSPYPYNNPYPYPHHPPPPPPNYGCPPSDPCYPPHPYPPYPPYGAYAYPPPPHSPSHSGPLDYSHQNPSAPYLTSHSGPLDYSHNPSKPQPTSLSGSLDYSQHQPPSPHPITNSGPLDFNRHYSGPLATSPYAAYPPVPHVSNSILHNYPFAQPQSSQYPSIDSISQSPSRANSFSGIHRQDSSSSLGIGSSSSNPDKVDAAVAGTSSAYPPLDDLISNLHLNDTNNHPTAPASLPAPPVPSVPYSPQSYQGSSFGHAPPHELYGYPNDSFSINWEENYAGKVDSSGHYPASPYAHSSSFNGSQHGQSMEVVPVSSGKGSSLKVLLLHGNLDICVYDAKNLPNMDIFHKTLGDMFNKLPGSISSKIEGQVYTKITSDPYVSISVAGAVIGRTFVISNSENPEWTQHFYVPVAHSAAEVRFVVKDSDVLGSQLIGVVALPVEQIYSGARIEGVYPILNNNGKQCKPGASLRISIQYMPIEKLGIYQHGVGAGPDYHGVPGTYFPLRKGGTVTLYQDAHVPDGSLPNVQLDNGMPYLHGKCWQDIFDAIRQARRLIYITGWSVWHKVALVRDGGQHSGVPLGDLLRSKSQEGVRVLLLLWDDPTSRNVLGYKTDGIMATHDEETRRFFKRSSVQVLLCPRIAGKKHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDNPDHSLFRTLQTVHKDDYHNPTFTGSVANCQREPWHDLHSRIDGPAAYDVLTNFEDRWMKAAKPKGLRKLKTSYDDALLRIDRIPDIIGVFDALSISEDDPEAWHVQIFRSIDSNSVKDFPKDPKDAPKKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWGSYKDLGANNLIPMEIALKIANKIRANERFAAYIIVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALDEVGLEDAFSSQDFLNFFCLGNREAVDESNSSGMPTPSSSPIPQALCQKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPQHTWARKQSNPLGQIHGYRMSLWAEHTGVIEDSFTKPESLECVRRIRTMGEMNWKQFAAEEVSEMRGHLLKYPVEVDRKGKVRPIPGSETFPDVGGNITGSFLAIQENLTI

Target ORF information:

RefSeq Version	XM_002301281.2
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Definition	Populus trichocarpa PHOSPHOLIPASE D BETA 1 family protein (POPTR_0002s15350g) mRNA, complete cds.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002301281.2

ORF Insert Sequence:

ATGGATAATG ATCATGGCTC TCCATACCCT TATAACAATC CATATCCATA CCCTCACCAT 
CCTCCTCCTC CTCCTCCAAA TTATGGGTGT CCACCTTCAG ATCCATGCTA TCCTCCTCAT 
CCCTATCCTC CATACCCTCC ATACGGTGCT TACGCATATC CACCACCACC ACACTCACCA 
TCGCATTCAG GGCCTTTAGA TTATTCTCAC CAAAATCCTT CAGCACCATA TCTAACAAGC 
CATTCAGGGC CTTTAGACTA TTCACACAAT CCTTCAAAAC CACAACCAAC TAGTCTTTCG 
GGTTCTTTAG ACTATTCTCA ACACCAACCA CCATCACCAC ATCCAATAAC GAATTCGGGA 
CCTTTAGATT TTAATCGCCA CTATTCTGGT CCTTTAGCAA CATCACCATA TGCTGCATAT 
CCACCAGTAC CTCATGTTTC AAATTCAATC CTTCATAATT ACCCTTTTGC TCAACCTCAG 
TCGAGCCAAT ATCCTTCTAT TGATAGCATT TCACAATCGC CCTCTAGGGC TAATAGCTTT 
TCCGGTATTC ATAGACAAGA TAGTTCTTCA TCTTTAGGAA TTGGATCATC TTCATCAAAT 
CCCGATAAAG TTGATGCTGC TGTTGCTGGT ACTTCTTCTG CATATCCACC TTTGGATGAT 
TTAATAAGTA ATTTGCATTT GAATGATACG AATAATCATC CTACTGCCCC TGCTTCCCTA 
CCAGCTCCTC CAGTACCTTC AGTGCCTTAT TCCCCTCAAA GCTATCAGGG CTCTAGTTTT 
GGACATGCCC CCCCACACGA ATTATATGGT TATCCTAATG ACTCATTTTC AATTAATTGG 
GAGGAGAATT ATGCGGGCAA AGTTGATTCG TCTGGTCACT ATCCTGCCTC TCCTTATGCG 
CATTCATCCT CCTTTAATGG ATCACAGCAT GGCCAAAGTA TGGAGGTTGT GCCAGTGTCG 
AGTGGTAAAG GGTCGTCTTT GAAGGTTTTG CTCTTACACG GGAATTTGGA TATTTGTGTT 
TATGATGCAA AGAATCTCCC AAACATGGAC ATTTTCCACA AGACTTTGGG TGATATGTTC 
AACAAATTAC CTGGAAGTAT AAGTAGCAAG ATTGAAGGAC AAGTGTACAC CAAGATTACC 
AGCGACCCTT ATGTTTCAAT TTCAGTAGCT GGTGCTGTGA TTGGGAGGAC TTTTGTGATT 
AGCAATAGTG AAAATCCTGA ATGGACGCAG CATTTTTATG TTCCTGTTGC ACATTCCGCT 
GCAGAAGTGC GTTTTGTTGT TAAAGACAGT GATGTTCTGG GGTCGCAGTT GATAGGAGTT 
GTGGCACTTC CAGTTGAACA GATATATTCA GGGGCAAGAA TTGAGGGAGT TTACCCTATT 
TTGAATAACA ACGGAAAACA ATGTAAGCCT GGTGCTTCTT TGAGAATTTC AATTCAGTAC 
ATGCCCATAG AGAAACTGGG CATTTATCAA CATGGTGTTG GTGCTGGTCC TGATTATCAT 
GGTGTGCCTG GTACCTATTT TCCTCTTAGG AAAGGTGGAA CAGTTACTCT TTATCAAGAT 
GCCCATGTTC CTGACGGGAG CCTTCCAAAT GTGCAACTTG ATAACGGGAT GCCTTATCTG 
CATGGAAAGT GCTGGCAAGA TATCTTTGAT GCTATACGTC AAGCCCGGCG TTTAATTTAC 
ATTACCGGGT GGTCTGTATG GCACAAAGTT GCTCTGGTCC GGGATGGTGG TCAGCATTCA 
GGTGTGCCCC TTGGGGATCT TCTGAGGTCC AAGTCCCAGG AAGGCGTAAG AGTTCTGCTT 
CTTCTTTGGG ATGATCCTAC TTCAAGGAAT GTCTTGGGAT ATAAAACAGA TGGAATTATG 
GCAACCCATG ATGAGGAAAC TCGCCGCTTT TTCAAACGCT CATCAGTTCA AGTGCTGCTT 
TGTCCTCGCA TTGCTGGGAA AAAACATAGC TGGGTCAAGC AAAGGGAGGT CGGAACAATT 
TATACACATC ATCAGAAAAC TGTAATTGTT GATGCTGATG CTGGCAATAA TAGAAGAAAA 
ATCATAGCCT TTGTTGGTGG ACTTGATTTA TGTGATGGTC GATATGATAA TCCTGATCAC 
TCTCTATTTA GGACACTACA AACTGTTCAC AAAGATGACT ATCACAACCC TACTTTCACT 
GGTAGTGTCG CAAATTGCCA AAGAGAACCA TGGCATGACT TGCACAGCAG AATAGATGGT 
CCAGCAGCGT ATGATGTTCT AACTAACTTT GAGGACCGTT GGATGAAGGC TGCAAAACCT 
AAGGGCCTTA GAAAACTAAA AACATCATAT GATGATGCTT TACTCAGGAT TGACAGAATT 
CCAGACATTA TAGGTGTTTT TGATGCTCTT TCCATTAGTG AGGATGACCC TGAAGCTTGG 
CATGTTCAGA TTTTTCGTTC AATTGATTCA AACTCTGTGA AAGACTTCCC AAAGGATCCG 
AAGGATGCCC CGAAAAAGAA CCTGGTGTGT GGAAAGAATG TGCTCATTGA CATGAGCATA 
CATACAGCAT ATGTGAAGGC CATTCGTGCT GCCCAACATT TTATTTACAT AGAGAACCAG 
TATTTTATTG GGTCCTCGTA CAACTGGGGT TCATATAAAG ATTTAGGGGC TAATAATTTG 
ATTCCTATGG AAATTGCACT AAAGATTGCC AATAAAATCA GAGCGAATGA GAGATTTGCT 
GCCTACATTA TTGTTCCGAT GTGGCCAGAG GGTGTTCCAA CCGGTGCTGC CACGCAAAGG 
ATTTTGTTTT GGCAGCATAA AACTATGCAA ATGATGTATG AGACAATTTA CAAGGCCCTA 
GACGAGGTTG GACTTGAGGA TGCATTCTCA TCACAGGATT TTTTGAACTT CTTCTGTCTT 
GGTAATCGTG AAGCTGTAGA TGAATCCAAC TCTTCAGGGA TGCCAACTCC TTCAAGTTCT 
CCCATTCCTC AGGCACTTTG TCAGAAAAGC CGGCGGTTCA TGATTTATGT TCATTCGAAA 
GGGATGATAG TTGATGATGA GTATGTAATA CTAGGATCTG CAAACATAAA TCAGCGTTCA 
ATGGAGGGCA CTAGAGACAC TGAGATTGCA ATGGGAGCCT ACCAACCTCA ACATACCTGG 
GCAAGAAAAC AATCTAATCC GCTTGGACAG ATCCATGGAT ATCGGATGTC TCTCTGGGCA 
GAGCATACTG GAGTTATTGA GGACTCCTTT ACAAAACCTG AGAGTCTTGA ATGTGTTAGG 
AGAATTAGAA CAATGGGGGA GATGAACTGG AAACAATTTG CTGCTGAGGA GGTTTCAGAG 
ATGAGAGGGC ACCTGCTAAA GTACCCGGTT GAAGTTGATC GAAAGGGCAA GGTGAGGCCT 
ATCCCTGGAT CTGAAACTTT CCCAGATGTC GGAGGAAATA TAACGGGTTC GTTTCTTGCA 
ATTCAGGAGA ATCTGACTAT CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC7494030 ( XM_002301281.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301317.3 Populus trichocarpa phospholipase D beta 2 (LOC7494030), mRNA.

Price & Availability↑

CloneID	OPa423593
Clone ID Related Accession (Same CDS sequence)	XM_002301281.3
Accession Version	XM_002301281.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3420bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1523116800000
Organism	Populus trichocarpa(black cottonwood)
Product	phospholipase D beta 2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301281.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTCTCC ATACCCTTAT AACAATCCAT ATCCATACCC TCACCATCCT CCTCCTCCTC 
CTCCAAATTA TGGGTGATCC ATGCTATCCT CCTCATCCCT ATCCTCCATA CCCTCCATAC 
GGTGCTTACG CATATCCACC ACCACCACAC TCACCATCGC ATTCAGGGCC TTTAGATTAT 
TCTCACCAAA ATCCTTCAGC ACCATATCTA ACAAGCCATT CAGGGCCTTT AGACTATTCA 
CACAATCCTT CAAAACCACA ACCAACTAGT CTTTCGGGTT CTTTAGACTA TTCTCAACAC 
CAACCACCAT CACCACATCC AATAACGAAT TCGGGACCTT TAGATTTTAA TCGCCACTAT 
TCTGGTCCTT TAGCAACATC ACCATATGCT GCATATCCAC CAGTACCTCA TGTTTCAAAT 
TCAATCCTTC ATAATTACCC TTTTGCTCAA CCTCAGTCGA GCCAATATCC TTCTATTGAT 
AGCATTTCAC AATCGCCCTC TAGGGCTAAT AGCTTTTCCG GTATTCATAG ACAAGATAGT 
TCTTCATCTT TAGGAATTGG ATCATCTTCA TCAAATCCCG ATAAAGTTGA TGCTGCTGTT 
GCTGGTACTT CTTCTGCATA TCCACCTTTG GATGATTTAA TAAGTAATTT GCATTTGAAT 
GATACGAATA ATCATCCTAC TGCCCCTGCT TCCCTACCAG CTCCTCCAGT ACCTTCAGTG 
CCTTATTCCC CTCAAAGCTA TCAGGGCTCT AGTTTTGGAC ATGCCCCCCC ACACGAATTA 
TATGGTTATC CTAATGACTC ATTTTCAATT AATTGGGAGG AGAATTATGC GGGCAAAGTT 
GATTCGTCTG GTCACTATCC TGCTTCTCCT TATGCGCATT CATCCTCCTT TAATGGATCA 
CAGCATGGCC AAAGTATGGA GGTTGTGCCA GTGTCGAGTG GTAAAGGGTC GTCTTTGAAG 
GTTTTGCTCT TACACGGGAA TTTGGATATT TGTGTTTATG ATGCAAAGAA TCTCCCAAAC 
ATGGACATTT TCCACAAGAC TTTGGGTGAT ATGTTCAACA AATTACCTGG AAGTATAAGT 
AGCAAGATTG AAGGACAAGT GTACACCAAG ATTACCAGCG ACCCTTATGT TTCAATTTCA 
GTAGCTGGTG CTGTGATTGG GAGGACTTTT GTGATTAGCA ATAGTGAAAA TCCTGAATGG 
ACGCAGCATT TTTATGTTCC TGTTGCACAT TCCGCTGCAG AAGTGCGTTT TGTTGTTAAA 
GACAGTGATG TTCTGGGGTC GCAGTTGATA GGAGTTGTGG CACTTCCAGT TGAACAGATA 
TATTCAGGGG CAAGAATTGA GGGAGTTTAC CCTATTTTGA ATAACAACGG AAAACAATGT 
AAGCCTGGTG CTTCTTTGAG AATTTCAATT CAGTACATGC CCATAGAGAA ACTGGGCATT 
TATCAACATG GTGTTGGTGC TGGTCCTGAT TATCATGGTG TGCCTGGTAC CTATTTTCCT 
CTTAGGAAAG GTGGAACAGT TACTCTTTAT CAAGATGCCC ATGTTCCTGA CGGGAGCCTT 
CCAAATGTGC AACTTGATAA CGGGATGCCT TATCTGCATG GAAAGTGCTG GCAAGATATC 
TTTGATGCTA TACGTCAAGC CCGGCGTTTA ATTTACATTA CCGGGTGGTC TGTATGGCAC 
AAAGTTGCTC TGGTCCGGGA TGGTGGTCAG CATTCAGGTG TGCCCCTTGG GGATCTTCTG 
AGGTCCAAGT CCCAGGAAGG CGTAAGAGTT CTGCTTCTTC TTTGGGATGA TCCTACTTCA 
AGGAATGTCT TGGGATATAA AACAGATGGA ATTATGGCAA CCCATGATGA GGAAACTCGC 
CGCTTTTTCA AACGCTCATC AGTTCAAGTG CTGCTTTGTC CTCGCATTGC TGGGAAAAAA 
CATAGCTGGG TCAAGCAAAG GGAGGTCGGA ACAATTTATA CACATCATCA GAAAACTGTA 
ATTGTTGATG CTGATGCTGG CAATAATAGA AGAAAAATCA TAGCCTTTGT TGGTGGACTT 
GATTTATGTG ATGGTCGATA TGATAATCCT GATCACTCTC TATTTAGGAC ACTACAAACT 
GTTCACAAAG ATGACTATCA CAACCCTACT TTCACTGGTA GTGTCGCAAA TTGCCAAAGA 
GAACCATGGC ATGACTTGCA CAGCAGAATA GATGGTCCAG CAGCGTATGA TGTTCTAACT 
AACTTTGAGG ACCGTTGGAT GAAGGCTGCA AAACCTAAGG GCCTTAGAAA ACTAAAAACA 
TCATATGATG ATGCTTTACT CAGGATTGAC AGAATTCCAG ACATTATAGG TGTTTTTGAT 
GCTCTTTCCA TTAGTGAGGA TGACCCTGAA GCTTGGCATG TTCAGATTTT TCGTTCAATT 
GATTCAAACT CTGTGAAAGA CTTCCCAAAG GATCCGAAGG ATGCCCCGAA AAAGAACCTG 
GTGTGTGGAA AGAATGTGCT CATTGACATG AGCATACATA CAGCATATGT GAAGGCCATT 
CGTGCTGCCC AACATTTTAT TTACATAGAG AACCAGTATT TTATTGGGTC CTCGTACAAC 
TGGGGTTCAT ATAAAGATTT AGGGGCTAAT AATTTGATTC CTATGGAAAT TGCACTAAAG 
ATTGCCAATA AAATCAGAGC GAATGAGAGA TTTGCTGCCT ACATTATTGT TCCGATGTGG 
CCAGAGGGTG TTCCAACCGG TGCTGCCACG CAAAGGATTT TGTTTTGGCA GCATAAAACT 
ATGCAAATGA TGTATGAGAC AATTTACAAG GCCCTAGACG AGGTTGGACT TGAGGATGCA 
TTCTCATCAC AGGATTTTTT GAACTTCTTC TGTCTTGGTA ATCGTGAAGC TGTAGATGAA 
TCCAACTCTT CAGGGATGCC AACTCCTTCA AGTTCTCCCA TTCCTCAGGC ACTTTGTCAG 
AAAAGCCGGC GGTTCATGAT TTATGTTCAT TCGAAAGGGA TGATAGTTGA TGATGAGTAT 
GTAATACTAG GATCTGCAAA CATAAATCAG CGTTCAATGG AGGGCACTAG AGACACTGAG 
ATTGCAATGG GAGCCTACCA ACCTCAACAT ACCTGGGCAA GAAAACAATC TAATCCGCTT 
GGACAGATCC ATGGATATCG GATGTCTCTC TGGGCAGAGC ATACTGGAGT TATTGAGGAC 
TCCTTTACAA AACCTGAGAG TCTTGAATGT GTTAGGAGAA TTAGAACAAT GGGGGAGATG 
AACTGGAAAC AATTTGCTGC TGAGGAGGTT TCAGAGATGA GAGGGCACCT GCTAAAGTAC 
CCGGTTGAAG TTGATCGAAA GGGCAAGGTG AGGCCTATCC CTGGATCTGA AACTTTCCCA 
GATGTCGGAG GAAATATAAC GGGTTCGTTT CTTGCAATTC AGGAGAATCT GACTATCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002301317.3
CDS	1..3420
Translation	MALHTLITIHIHTLTILLLLLQIMGDPCYPPHPYPPYPPYGAYAYPPPPHSPSHSGPLDYSHQNPSAPYLTSHSGPLDYSHNPSKPQPTSLSGSLDYSQHQPPSPHPITNSGPLDFNRHYSGPLATSPYAAYPPVPHVSNSILHNYPFAQPQSSQYPSIDSISQSPSRANSFSGIHRQDSSSSLGIGSSSSNPDKVDAAVAGTSSAYPPLDDLISNLHLNDTNNHPTAPASLPAPPVPSVPYSPQSYQGSSFGHAPPHELYGYPNDSFSINWEENYAGKVDSSGHYPASPYAHSSSFNGSQHGQSMEVVPVSSGKGSSLKVLLLHGNLDICVYDAKNLPNMDIFHKTLGDMFNKLPGSISSKIEGQVYTKITSDPYVSISVAGAVIGRTFVISNSENPEWTQHFYVPVAHSAAEVRFVVKDSDVLGSQLIGVVALPVEQIYSGARIEGVYPILNNNGKQCKPGASLRISIQYMPIEKLGIYQHGVGAGPDYHGVPGTYFPLRKGGTVTLYQDAHVPDGSLPNVQLDNGMPYLHGKCWQDIFDAIRQARRLIYITGWSVWHKVALVRDGGQHSGVPLGDLLRSKSQEGVRVLLLLWDDPTSRNVLGYKTDGIMATHDEETRRFFKRSSVQVLLCPRIAGKKHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDNPDHSLFRTLQTVHKDDYHNPTFTGSVANCQREPWHDLHSRIDGPAAYDVLTNFEDRWMKAAKPKGLRKLKTSYDDALLRIDRIPDIIGVFDALSISEDDPEAWHVQIFRSIDSNSVKDFPKDPKDAPKKNLVCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWGSYKDLGANNLIPMEIALKIANKIRANERFAAYIIVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALDEVGLEDAFSSQDFLNFFCLGNREAVDESNSSGMPTPSSSPIPQALCQKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPQHTWARKQSNPLGQIHGYRMSLWAEHTGVIEDSFTKPESLECVRRIRTMGEMNWKQFAAEEVSEMRGHLLKYPVEVDRKGKVRPIPGSETFPDVGGNITGSFLAIQENLTI

Target ORF information:

RefSeq Version	XM_002301281.3
Organism	Populus trichocarpa(black cottonwood)
Definition	Populus trichocarpa phospholipase D beta 2 (LOC7494030), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002301281.3

ORF Insert Sequence:

ATGGCTCTCC ATACCCTTAT AACAATCCAT ATCCATACCC TCACCATCCT CCTCCTCCTC 
CTCCAAATTA TGGGTGATCC ATGCTATCCT CCTCATCCCT ATCCTCCATA CCCTCCATAC 
GGTGCTTACG CATATCCACC ACCACCACAC TCACCATCGC ATTCAGGGCC TTTAGATTAT 
TCTCACCAAA ATCCTTCAGC ACCATATCTA ACAAGCCATT CAGGGCCTTT AGACTATTCA 
CACAATCCTT CAAAACCACA ACCAACTAGT CTTTCGGGTT CTTTAGACTA TTCTCAACAC 
CAACCACCAT CACCACATCC AATAACGAAT TCGGGACCTT TAGATTTTAA TCGCCACTAT 
TCTGGTCCTT TAGCAACATC ACCATATGCT GCATATCCAC CAGTACCTCA TGTTTCAAAT 
TCAATCCTTC ATAATTACCC TTTTGCTCAA CCTCAGTCGA GCCAATATCC TTCTATTGAT 
AGCATTTCAC AATCGCCCTC TAGGGCTAAT AGCTTTTCCG GTATTCATAG ACAAGATAGT 
TCTTCATCTT TAGGAATTGG ATCATCTTCA TCAAATCCCG ATAAAGTTGA TGCTGCTGTT 
GCTGGTACTT CTTCTGCATA TCCACCTTTG GATGATTTAA TAAGTAATTT GCATTTGAAT 
GATACGAATA ATCATCCTAC TGCCCCTGCT TCCCTACCAG CTCCTCCAGT ACCTTCAGTG 
CCTTATTCCC CTCAAAGCTA TCAGGGCTCT AGTTTTGGAC ATGCCCCCCC ACACGAATTA 
TATGGTTATC CTAATGACTC ATTTTCAATT AATTGGGAGG AGAATTATGC GGGCAAAGTT 
GATTCGTCTG GTCACTATCC TGCTTCTCCT TATGCGCATT CATCCTCCTT TAATGGATCA 
CAGCATGGCC AAAGTATGGA GGTTGTGCCA GTGTCGAGTG GTAAAGGGTC GTCTTTGAAG 
GTTTTGCTCT TACACGGGAA TTTGGATATT TGTGTTTATG ATGCAAAGAA TCTCCCAAAC 
ATGGACATTT TCCACAAGAC TTTGGGTGAT ATGTTCAACA AATTACCTGG AAGTATAAGT 
AGCAAGATTG AAGGACAAGT GTACACCAAG ATTACCAGCG ACCCTTATGT TTCAATTTCA 
GTAGCTGGTG CTGTGATTGG GAGGACTTTT GTGATTAGCA ATAGTGAAAA TCCTGAATGG 
ACGCAGCATT TTTATGTTCC TGTTGCACAT TCCGCTGCAG AAGTGCGTTT TGTTGTTAAA 
GACAGTGATG TTCTGGGGTC GCAGTTGATA GGAGTTGTGG CACTTCCAGT TGAACAGATA 
TATTCAGGGG CAAGAATTGA GGGAGTTTAC CCTATTTTGA ATAACAACGG AAAACAATGT 
AAGCCTGGTG CTTCTTTGAG AATTTCAATT CAGTACATGC CCATAGAGAA ACTGGGCATT 
TATCAACATG GTGTTGGTGC TGGTCCTGAT TATCATGGTG TGCCTGGTAC CTATTTTCCT 
CTTAGGAAAG GTGGAACAGT TACTCTTTAT CAAGATGCCC ATGTTCCTGA CGGGAGCCTT 
CCAAATGTGC AACTTGATAA CGGGATGCCT TATCTGCATG GAAAGTGCTG GCAAGATATC 
TTTGATGCTA TACGTCAAGC CCGGCGTTTA ATTTACATTA CCGGGTGGTC TGTATGGCAC 
AAAGTTGCTC TGGTCCGGGA TGGTGGTCAG CATTCAGGTG TGCCCCTTGG GGATCTTCTG 
AGGTCCAAGT CCCAGGAAGG CGTAAGAGTT CTGCTTCTTC TTTGGGATGA TCCTACTTCA 
AGGAATGTCT TGGGATATAA AACAGATGGA ATTATGGCAA CCCATGATGA GGAAACTCGC 
CGCTTTTTCA AACGCTCATC AGTTCAAGTG CTGCTTTGTC CTCGCATTGC TGGGAAAAAA 
CATAGCTGGG TCAAGCAAAG GGAGGTCGGA ACAATTTATA CACATCATCA GAAAACTGTA 
ATTGTTGATG CTGATGCTGG CAATAATAGA AGAAAAATCA TAGCCTTTGT TGGTGGACTT 
GATTTATGTG ATGGTCGATA TGATAATCCT GATCACTCTC TATTTAGGAC ACTACAAACT 
GTTCACAAAG ATGACTATCA CAACCCTACT TTCACTGGTA GTGTCGCAAA TTGCCAAAGA 
GAACCATGGC ATGACTTGCA CAGCAGAATA GATGGTCCAG CAGCGTATGA TGTTCTAACT 
AACTTTGAGG ACCGTTGGAT GAAGGCTGCA AAACCTAAGG GCCTTAGAAA ACTAAAAACA 
TCATATGATG ATGCTTTACT CAGGATTGAC AGAATTCCAG ACATTATAGG TGTTTTTGAT 
GCTCTTTCCA TTAGTGAGGA TGACCCTGAA GCTTGGCATG TTCAGATTTT TCGTTCAATT 
GATTCAAACT CTGTGAAAGA CTTCCCAAAG GATCCGAAGG ATGCCCCGAA AAAGAACCTG 
GTGTGTGGAA AGAATGTGCT CATTGACATG AGCATACATA CAGCATATGT GAAGGCCATT 
CGTGCTGCCC AACATTTTAT TTACATAGAG AACCAGTATT TTATTGGGTC CTCGTACAAC 
TGGGGTTCAT ATAAAGATTT AGGGGCTAAT AATTTGATTC CTATGGAAAT TGCACTAAAG 
ATTGCCAATA AAATCAGAGC GAATGAGAGA TTTGCTGCCT ACATTATTGT TCCGATGTGG 
CCAGAGGGTG TTCCAACCGG TGCTGCCACG CAAAGGATTT TGTTTTGGCA GCATAAAACT 
ATGCAAATGA TGTATGAGAC AATTTACAAG GCCCTAGACG AGGTTGGACT TGAGGATGCA 
TTCTCATCAC AGGATTTTTT GAACTTCTTC TGTCTTGGTA ATCGTGAAGC TGTAGATGAA 
TCCAACTCTT CAGGGATGCC AACTCCTTCA AGTTCTCCCA TTCCTCAGGC ACTTTGTCAG 
AAAAGCCGGC GGTTCATGAT TTATGTTCAT TCGAAAGGGA TGATAGTTGA TGATGAGTAT 
GTAATACTAG GATCTGCAAA CATAAATCAG CGTTCAATGG AGGGCACTAG AGACACTGAG 
ATTGCAATGG GAGCCTACCA ACCTCAACAT ACCTGGGCAA GAAAACAATC TAATCCGCTT 
GGACAGATCC ATGGATATCG GATGTCTCTC TGGGCAGAGC ATACTGGAGT TATTGAGGAC 
TCCTTTACAA AACCTGAGAG TCTTGAATGT GTTAGGAGAA TTAGAACAAT GGGGGAGATG 
AACTGGAAAC AATTTGCTGC TGAGGAGGTT TCAGAGATGA GAGGGCACCT GCTAAAGTAC 
CCGGTTGAAG TTGATCGAAA GGGCAAGGTG AGGCCTATCC CTGGATCTGA AACTTTCCCA 
GATGTCGGAG GAAATATAAC GGGTTCGTTT CTTGCAATTC AGGAGAATCT GACTATCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D

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LOC7494030 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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