ORF » Species Summary » Populus trichocarpa » LOC7493490 cDNA ORF clone

LOC7493490 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7493490 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7493490 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27219 XM_002317834.3
Latest version!		 Populus trichocarpa prostaglandin E synthase 2 (LOC7493490), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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OPa27219 XM_002317834.2 Populus trichocarpa hypothetical protein (POPTR_0012s04410g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7493490 ( XM_002317834.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317870.1 Populus trichocarpa hypothetical protein (POPTR_0012s04410g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27219
    Clone ID Related Accession (Same CDS sequence) XM_002317834.2 , XM_002317834.3
    Accession Version XM_002317834.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 984bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008478). On Dec 16, 2013 this sequence version replaced XM_002317834.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAGAAGAG CGTCCACTCT CGCCTCTTCC GTCCTCTCTC GGACCCTCAC CCCCACCCTC 
    CACGAAGGCG GTGCCCTCTC CACCATCAAC CACCGTTTCC TCCTTGTTGC ACTCTACAGC 
    ACCACCAGCA ATACCGGCAG TTCCCACAGT CGCCGGATCT TCAACCCATT CTCCTCGTCT 
    CTCGGTGTCG CCGGGGCCTT AGTCTCCGCC GCTGCCGCTG CATCTCTCTC TCAAGACGTC 
    CTCGCCAAGG AGCCACCACG GGCCGAGCTC GTGCCTAAGG AAGTTGTTCT TTATCAGTAC 
    GAGGCCTGTC CTTTTTGCAA TAAAGTTAAA GCTTATTTGG ATTACTATGA TATACCATAC 
    AAAGTAGTGG AAGTGAATCC AATTAGTAAG AAAGAGATCA AATGGTCTGA TTATAAGAAG 
    GTTCCTATAT TGACGGTGGA TGGAGAACAG CTTGTCGACT CTTCAGCCAT CATTGATAAG 
    TTGAGAAACA AGATACATGG TAAGGAAATT GTAGAATCTG CTTCTGATAA GGATGATGAT 
    GAAGAGATAA AGTGGCGGAG GTGGGTTGAC AATCACTTGG TACATGTCTT GTCTCCAAAC 
    ATTTATCGCA ATACTTCTGA GGCTCTTGAA TCCTTCGACT ATATCACAAG CAATGGTAAT 
    TTTAGCTTTA CAGAGAAAAT CACCGTCAAG TATGCTGGAG CTGCTGCAAT GTATTTTGTG 
    TCAAAGAAAT TGAAGAAGAA ATATAACATT ACTGATGAAC GTGCTGCCCT GTATGAAGCT 
    GCGGAAACAT GGGTGGATGC TCTGAATGGC CGAGAGTTTC TTGGGGGGTC AAAGCCTAAT 
    TTAGCTGACC TTGCTGTTTT TGGGGTGTTG AGACCCATCC GCTATCTGAG GTCTGGTAGA 
    GATATGGTGG AGCAAACTCG AATAGGAGAT TGGTATACAA GAATGGAGAA CGCTGTGGGG 
    GAATCCGCAA GGATAAAGGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317870.1
    CDS99..1082
    Translation

    Target ORF information:

    RefSeq Version XM_002317834.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0012s04410g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317834.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAGAAGAG CGTCCACTCT CGCCTCTTCC GTCCTCTCTC GGACCCTCAC CCCCACCCTC 
    CACGAAGGCG GTGCCCTCTC CACCATCAAC CACCGTTTCC TCCTTGTTGC ACTCTACAGC 
    ACCACCAGCA ATACCGGCAG TTCCCACAGT CGCCGGATCT TCAACCCATT CTCCTCGTCT 
    CTCGGTGTCG CCGGGGCCTT AGTCTCCGCC GCTGCCGCTG CATCTCTCTC TCAAGACGTC 
    CTCGCCAAGG AGCCACCACG GGCCGAGCTC GTGCCTAAGG AAGTTGTTCT TTATCAGTAC 
    GAGGCCTGTC CTTTTTGCAA TAAAGTTAAA GCTTATTTGG ATTACTATGA TATACCATAC 
    AAAGTAGTGG AAGTGAATCC AATTAGTAAG AAAGAGATCA AATGGTCTGA TTATAAGAAG 
    GTTCCTATAT TGACGGTGGA TGGAGAACAG CTTGTCGACT CTTCAGCCAT CATTGATAAG 
    TTGAGAAACA AGATACATGG TAAGGAAATT GTAGAATCTG CTTCTGATAA GGATGATGAT 
    GAAGAGATAA AGTGGCGGAG GTGGGTTGAC AATCACTTGG TACATGTCTT GTCTCCAAAC 
    ATTTATCGCA ATACTTCTGA GGCTCTTGAA TCCTTCGACT ATATCACAAG CAATGGTAAT 
    TTTAGCTTTA CAGAGAAAAT CACCGTCAAG TATGCTGGAG CTGCTGCAAT GTATTTTGTG 
    TCAAAGAAAT TGAAGAAGAA ATATAACATT ACTGATGAAC GTGCTGCCCT GTATGAAGCT 
    GCGGAAACAT GGGTGGATGC TCTGAATGGC CGAGAGTTTC TTGGGGGGTC AAAGCCTAAT 
    TTAGCTGACC TTGCTGTTTT TGGGGTGTTG AGACCCATCC GCTATCTGAG GTCTGGTAGA 
    GATATGGTGG AGCAAACTCG AATAGGAGAT TGGTATACAA GAATGGAGAA CGCTGTGGGG 
    GAATCCGCAA GGATAAAGGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7493490 ( XM_002317834.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002317870.1 Populus trichocarpa prostaglandin E synthase 2 (LOC7493490), mRNA.
    Price & Availability↑
    CloneID OPa27219
    Clone ID Related Accession (Same CDS sequence) XM_002317834.2 , XM_002317834.3
    Accession Version XM_002317834.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 984bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product prostaglandin E synthase 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037296.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002317834.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAGAAGAG CGTCCACTCT CGCCTCTTCC GTCCTCTCTC GGACCCTCAC CCCCACCCTC 
    CACGAAGGCG GTGCCCTCTC CACCATCAAC CACCGTTTCC TCCTTGTTGC ACTCTACAGC 
    ACCACCAGCA ATACCGGCAG TTCCCACAGT CGCCGGATCT TCAACCCATT CTCCTCGTCT 
    CTCGGTGTCG CCGGGGCCTT AGTCTCCGCC GCTGCCGCTG CATCTCTCTC TCAAGACGTC 
    CTCGCCAAGG AGCCACCACG GGCCGAGCTC GTGCCTAAGG AAGTTGTTCT TTATCAGTAC 
    GAGGCCTGTC CTTTTTGCAA TAAAGTTAAA GCTTATTTGG ATTACTATGA TATACCATAC 
    AAAGTAGTGG AAGTGAATCC AATTAGTAAG AAAGAGATCA AATGGTCTGA TTATAAGAAG 
    GTTCCTATAT TGACGGTGGA TGGAGAACAG CTTGTCGACT CTTCAGCCAT CATTGATAAG 
    TTGAGAAACA AGATACATGG TAAGGAAATT GTAGAATCTG CTTCTGATAA GGATGATGAT 
    GAAGAGATAA AGTGGCGGAG GTGGGTTGAC AATCACTTGG TACATGTCTT GTCTCCAAAC 
    ATTTATCGCA ATACTTCTGA GGCTCTTGAA TCCTTCGACT ATATCACAAG CAATGGTAAT 
    TTTAGCTTTA CAGAGAAAAT CACCGTCAAG TATGCTGGAG CTGCTGCAAT GTATTTTGTG 
    TCAAAGAAAT TGAAGAAGAA ATATAACATT ACTGATGAAC GTGCTGCCCT GTATGAAGCT 
    GCGGAAACAT GGGTGGATGC TCTGAATGGC CGAGAGTTTC TTGGGGGGTC AAAGCCTAAT 
    TTAGCTGACC TTGCTGTTTT TGGGGTGTTG AGACCCATCC GCTATCTGAG GTCTGGTAGA 
    GATATGGTGG AGCAAACTCG AATAGGAGAT TGGTATACAA GAATGGAGAA CGCTGTGGGG 
    GAATCCGCAA GGATAAAGGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002317870.1
    CDS157..1140
    Translation

    Target ORF information:

    RefSeq Version XM_002317834.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa prostaglandin E synthase 2 (LOC7493490), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002317834.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAGAAGAG CGTCCACTCT CGCCTCTTCC GTCCTCTCTC GGACCCTCAC CCCCACCCTC 
    CACGAAGGCG GTGCCCTCTC CACCATCAAC CACCGTTTCC TCCTTGTTGC ACTCTACAGC 
    ACCACCAGCA ATACCGGCAG TTCCCACAGT CGCCGGATCT TCAACCCATT CTCCTCGTCT 
    CTCGGTGTCG CCGGGGCCTT AGTCTCCGCC GCTGCCGCTG CATCTCTCTC TCAAGACGTC 
    CTCGCCAAGG AGCCACCACG GGCCGAGCTC GTGCCTAAGG AAGTTGTTCT TTATCAGTAC 
    GAGGCCTGTC CTTTTTGCAA TAAAGTTAAA GCTTATTTGG ATTACTATGA TATACCATAC 
    AAAGTAGTGG AAGTGAATCC AATTAGTAAG AAAGAGATCA AATGGTCTGA TTATAAGAAG 
    GTTCCTATAT TGACGGTGGA TGGAGAACAG CTTGTCGACT CTTCAGCCAT CATTGATAAG 
    TTGAGAAACA AGATACATGG TAAGGAAATT GTAGAATCTG CTTCTGATAA GGATGATGAT 
    GAAGAGATAA AGTGGCGGAG GTGGGTTGAC AATCACTTGG TACATGTCTT GTCTCCAAAC 
    ATTTATCGCA ATACTTCTGA GGCTCTTGAA TCCTTCGACT ATATCACAAG CAATGGTAAT 
    TTTAGCTTTA CAGAGAAAAT CACCGTCAAG TATGCTGGAG CTGCTGCAAT GTATTTTGTG 
    TCAAAGAAAT TGAAGAAGAA ATATAACATT ACTGATGAAC GTGCTGCCCT GTATGAAGCT 
    GCGGAAACAT GGGTGGATGC TCTGAATGGC CGAGAGTTTC TTGGGGGGTC AAAGCCTAAT 
    TTAGCTGACC TTGCTGTTTT TGGGGTGTTG AGACCCATCC GCTATCTGAG GTCTGGTAGA 
    GATATGGTGG AGCAAACTCG AATAGGAGAT TGGTATACAA GAATGGAGAA CGCTGTGGGG 
    GAATCCGCAA GGATAAAGGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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