ORF » Species Summary » Populus trichocarpa » POPTR_0001s31900g cDNA ORF clone

POPTR_0001s31900g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s31900g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s31900g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa02461 XM_002300151.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s31900g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa422428 XM_002300151.3
Latest version!		 Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa422429 XM_024586410.1
Latest version!		 Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s31900g ( XM_002300151.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300187.2 Populus trichocarpa hypothetical protein (POPTR_0001s31900g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa02461
    Clone ID Related Accession (Same CDS sequence) XM_002300151.2
    Accession Version XM_002300151.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 741bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002300151.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGACATGTC GTTGCATTTC CTTTTTTGCA AGTGAAAGAA TTAACTGTGG AGAGATTGGT 
    AGTGTTAACT ACATTTTGGC ATCAAGAATT GTGTGTCGCT CGCATTCTTC ACCGAGAGAA 
    CTCGAGAAGG AGGGAGGCAG AATGGACGGT GACGATGTGG ACATGGCCGC TGCAGAGACC 
    AACGAATCTG TACCAGAACT TGATGATATG AAGAAGAGAC TAAAGGAAAT GGAAGATGAA 
    GCTGCTGCTC TTCTTGAGAT GCAGGCCAAG GTTGAGAAGG AAATGGGCTC TGTACAAGAT 
    CCTAGTGCTT CAGCTGCTGC ATCCCAAGCA AATAGAGAGG AAGTAGATTC TCGATCAGTG 
    TTTGTTGGTA ATGTGGACTA TTCGTGCACC CCTGAAGAAG TGCAGCAGCA TTTTCAGGCA 
    TGTGGGACAA TAAATAGGAT CACTATCCGT TCTGACAAGT ATGGCCAACC AAAGGGTTAT 
    GCATATGTCG AATTCCTTGA ACCAGAGACT GTGCAGGAGG CTCTCCTTCT GAATGAGTCT 
    GAGTTACATG GCCGCCAATT GAAGGTAACT GTTAAGCGGA CCAATCTACC TGGGATGAAG 
    CAGTTTCGCG CGCGTCGACC CAACCCATAT ATGGGGTTTC CACCCAGGGG CGCTCCTATG 
    CCTCCTTATC TCTTTTCTCC TTATGGATAT GGGAAGGTTC TGAGATACAG AATGCCAATG 
    CGTTACAGCC CCTATGGCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300187.2
    CDS1..741
    Translation

    Target ORF information:

    RefSeq Version XM_002300151.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s31900g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300151.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGACATGTC GTTGCATTTC CTTTTTTGCA AGTGAAAGAA TTAACTGTGG AGAGATTGGT 
    AGTGTTAACT ACATTTTGGC ATCAAGAATT GTGTGTCGCT CGCATTCTTC ACCGAGAGAA 
    CTCGAGAAGG AGGGAGGCAG AATGGACGGT GACGATGTGG ACATGGCCGC TGCAGAGACC 
    AACGAATCTG TACCAGAACT TGATGATATG AAGAAGAGAC TAAAGGAAAT GGAAGATGAA 
    GCTGCTGCTC TTCTTGAGAT GCAGGCCAAG GTTGAGAAGG AAATGGGCTC TGTACAAGAT 
    CCTAGTGCTT CAGCTGCTGC ATCCCAAGCA AATAGAGAGG AAGTAGATTC TCGATCAGTG 
    TTTGTTGGTA ATGTGGACTA TTCGTGCACC CCTGAAGAAG TGCAGCAGCA TTTTCAGGCA 
    TGTGGGACAA TAAATAGGAT CACTATCCGT TCTGACAAGT ATGGCCAACC AAAGGGTTAT 
    GCATATGTCG AATTCCTTGA ACCAGAGACT GTGCAGGAGG CTCTCCTTCT GAATGAGTCT 
    GAGTTACATG GCCGCCAATT GAAGGTAACT GTTAAGCGGA CCAATCTACC TGGGATGAAG 
    CAGTTTCGCG CGCGTCGACC CAACCCATAT ATGGGGTTTC CACCCAGGGG CGCTCCTATG 
    CCTCCTTATC TCTTTTCTCC TTATGGATAT GGGAAGGTTC TGAGATACAG AATGCCAATG 
    CGTTACAGCC CCTATGGCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s31900g ( XM_002300151.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300187.3 Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa422428
    Clone ID Related Accession (Same CDS sequence) XM_002300151.3
    Accession Version XM_002300151.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 600bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product polyadenylate-binding protein 2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002300151.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGACGGTG ACGATGTGGA CATGGCCGCT GCAGAGACCA ACGAATCTGT ACCAGAACTT 
    GATGATATGA AGAAGAGACT AAAGGAAATG GAAGATGAAG CTGCTGCTCT TCTTGAGATG 
    CAGGCCAAGG TTGAGAAGGA AATGGGCTCT GTACAAGATC CTAGTGCTTC AGCTGCTGCA 
    TCCCAAGCAA ATAGAGAGGA AGTAGATTCT CGATCAGTGT TTGTTGGTAA TGTGGACTAT 
    TCGTGCACCC CTGAAGAAGT GCAGCAGCAT TTTCAGGCAT GTGGGACAAT AAATAGGATC 
    ACTATCCGTT CTGACAAGTA TGGCCAACCA AAGGGTTATG CATATGTCGA ATTCCTTGAA 
    CCAGAGACTG TGCAGGAGGC TCTCCTTCTG AATGAGTCTG AGTTACATGG CCGCCAATTG 
    AAGGTAACTG TTAAGCGGAC CAATCTACCT GGGATGAAGC AGTTTCGCGC GCGTCGACCC 
    AACCCATATA TGGGGTTTCC ACCCAGGGGC GCTCCTATGC CTCCTTATCT CTTTTCTCCT 
    TATGGATATG GGAAGGTTCT GAGATACAGA ATGCCAATGC GTTACAGCCC CTATGGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300187.3
    CDS109..708
    Translation

    Target ORF information:

    RefSeq Version XM_002300151.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300151.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGACGGTG ACGATGTGGA CATGGCCGCT GCAGAGACCA ACGAATCTGT ACCAGAACTT 
    GATGATATGA AGAAGAGACT AAAGGAAATG GAAGATGAAG CTGCTGCTCT TCTTGAGATG 
    CAGGCCAAGG TTGAGAAGGA AATGGGCTCT GTACAAGATC CTAGTGCTTC AGCTGCTGCA 
    TCCCAAGCAA ATAGAGAGGA AGTAGATTCT CGATCAGTGT TTGTTGGTAA TGTGGACTAT 
    TCGTGCACCC CTGAAGAAGT GCAGCAGCAT TTTCAGGCAT GTGGGACAAT AAATAGGATC 
    ACTATCCGTT CTGACAAGTA TGGCCAACCA AAGGGTTATG CATATGTCGA ATTCCTTGAA 
    CCAGAGACTG TGCAGGAGGC TCTCCTTCTG AATGAGTCTG AGTTACATGG CCGCCAATTG 
    AAGGTAACTG TTAAGCGGAC CAATCTACCT GGGATGAAGC AGTTTCGCGC GCGTCGACCC 
    AACCCATATA TGGGGTTTCC ACCCAGGGGC GCTCCTATGC CTCCTTATCT CTTTTCTCCT 
    TATGGATATG GGAAGGTTCT GAGATACAGA ATGCCAATGC GTTACAGCCC CTATGGCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s31900g ( XM_024586410.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024442178.1 Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa422429
    Clone ID Related Accession (Same CDS sequence) XM_024586410.1
    Accession Version XM_024586410.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 594bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product polyadenylate-binding protein 2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGACGGTG ACGATGTGGA CATGGCCGCT GCAGAGACCA ACGAATCTGA ACTTGATGAT 
    ATGAAGAAGA GACTAAAGGA AATGGAAGAT GAAGCTGCTG CTCTTCTTGA GATGCAGGCC 
    AAGGTTGAGA AGGAAATGGG CTCTGTACAA GATCCTAGTG CTTCAGCTGC TGCATCCCAA 
    GCAAATAGAG AGGAAGTAGA TTCTCGATCA GTGTTTGTTG GTAATGTGGA CTATTCGTGC 
    ACCCCTGAAG AAGTGCAGCA GCATTTTCAG GCATGTGGGA CAATAAATAG GATCACTATC 
    CGTTCTGACA AGTATGGCCA ACCAAAGGGT TATGCATATG TCGAATTCCT TGAACCAGAG 
    ACTGTGCAGG AGGCTCTCCT TCTGAATGAG TCTGAGTTAC ATGGCCGCCA ATTGAAGGTA 
    ACTGTTAAGC GGACCAATCT ACCTGGGATG AAGCAGTTTC GCGCGCGTCG ACCCAACCCA 
    TATATGGGGT TTCCACCCAG GGGCGCTCCT ATGCCTCCTT ATCTCTTTTC TCCTTATGGA 
    TATGGGAAGG TTCTGAGATA CAGAATGCCA ATGCGTTACA GCCCCTATGG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024442178.1
    CDS115..708
    Translation

    Target ORF information:

    RefSeq Version XM_024586410.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa polyadenylate-binding protein 2 (LOC7492020), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024586410.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGGACGGTG ACGATGTGGA CATGGCCGCT GCAGAGACCA ACGAATCTGA ACTTGATGAT 
    ATGAAGAAGA GACTAAAGGA AATGGAAGAT GAAGCTGCTG CTCTTCTTGA GATGCAGGCC 
    AAGGTTGAGA AGGAAATGGG CTCTGTACAA GATCCTAGTG CTTCAGCTGC TGCATCCCAA 
    GCAAATAGAG AGGAAGTAGA TTCTCGATCA GTGTTTGTTG GTAATGTGGA CTATTCGTGC 
    ACCCCTGAAG AAGTGCAGCA GCATTTTCAG GCATGTGGGA CAATAAATAG GATCACTATC 
    CGTTCTGACA AGTATGGCCA ACCAAAGGGT TATGCATATG TCGAATTCCT TGAACCAGAG 
    ACTGTGCAGG AGGCTCTCCT TCTGAATGAG TCTGAGTTAC ATGGCCGCCA ATTGAAGGTA 
    ACTGTTAAGC GGACCAATCT ACCTGGGATG AAGCAGTTTC GCGCGCGTCG ACCCAACCCA 
    TATATGGGGT TTCCACCCAG GGGCGCTCCT ATGCCTCCTT ATCTCTTTTC TCCTTATGGA 
    TATGGGAAGG TTCTGAGATA CAGAATGCCA ATGCGTTACA GCCCCTATGG CTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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