ORF » Species Summary » Populus trichocarpa » POPTR_0005s00900g cDNA ORF clone

POPTR_0005s00900g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s00900g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s00900g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa12369 XM_002307004.2
Latest version!		 Populus trichocarpa xyloglucan endo-1 family protein (POPTR_0005s00900g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa429213 XM_002307004.3
Latest version!		 Populus trichocarpa probable xyloglucan endotransglucosylase/hydrolase protein 23 (LOC7479149), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s00900g ( XM_002307004.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002307040.2 Populus trichocarpa xyloglucan endo-1 family protein (POPTR_0005s00900g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa12369
    Clone ID Related Accession (Same CDS sequence) XM_002307004.2
    Accession Version XM_002307004.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 804bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product xyloglucan endo-1 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002307004.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGGTCAT CTCTTGGTAA CTTCTACCAA GACTTCGATA TTATGTGGGG AGATTGGCGT 
    GCTATGATAC TCAACGATGG TGAGCTTCTC AATCTCAATC TTGACCAAGC TTCTGGCTCA 
    GGATTCCAAT CCAAGAATGA GTATTTGTTC GGAAAGATTG ATATGCAACT CAAGCTTGTC 
    CCTGGCAACT CTGCTGGCAC TGTAACTGCC TACTACTTAC AATCAAAAGG GTCGGCCTGG 
    GATGAGATAG ACTTTGAGTT CTTGGGGAAC TTGAGTGGAG ATCCTTACAT TCTTCATACT 
    AATGTGTATA GCCAAGGCAA AGGCGACAAG GAGCAACAAT TTTATCTCTG GTTTGATCCA 
    ACTGCTGATT TCCACACCTA TTCCATCCTT TGGAACCCAC AAAGAATCAT CTTCTTTGTA 
    GATGGCACCC CTATTAGGGA GTTCAAGAAC ATGGAATCGA TTGGTGTTCC ATTTCCAAAG 
    TATCAACCAA TGAGACTCTA CTCTACTTTA TGGAATGCAG ATAACTGGGC TACAAGAGGT 
    GGTCTCGTCA AGACTGATTG GTCACAAGCT CCTTTCACTG CCTCCTACAC GAACTTCAAT 
    GCTAATAATG CTTGTGTTTG GTTCAACGGT GCATCTTCTT GTGATTCAAA TAATTTCTCC 
    CCTCCTTCTT GGCTTTCAGA GGATCTTGAT TCAGCAAATC TTGATAAGCT TCAATGGGTC 
    CAAACGAACA ACATGATATA TAATTATTGC GCAGATGCCA AGAGGTTTCC CCAGGGATTT 
    CCTCCAGAAT GCAACATGTC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307040.2
    CDS1..804
    Translation

    Target ORF information:

    RefSeq Version XM_002307004.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa xyloglucan endo-1 family protein (POPTR_0005s00900g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307004.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGGTCAT CTCTTGGTAA CTTCTACCAA GACTTCGATA TTATGTGGGG AGATTGGCGT 
    GCTATGATAC TCAACGATGG TGAGCTTCTC AATCTCAATC TTGACCAAGC TTCTGGCTCA 
    GGATTCCAAT CCAAGAATGA GTATTTGTTC GGAAAGATTG ATATGCAACT CAAGCTTGTC 
    CCTGGCAACT CTGCTGGCAC TGTAACTGCC TACTACTTAC AATCAAAAGG GTCGGCCTGG 
    GATGAGATAG ACTTTGAGTT CTTGGGGAAC TTGAGTGGAG ATCCTTACAT TCTTCATACT 
    AATGTGTATA GCCAAGGCAA AGGCGACAAG GAGCAACAAT TTTATCTCTG GTTTGATCCA 
    ACTGCTGATT TCCACACCTA TTCCATCCTT TGGAACCCAC AAAGAATCAT CTTCTTTGTA 
    GATGGCACCC CTATTAGGGA GTTCAAGAAC ATGGAATCGA TTGGTGTTCC ATTTCCAAAG 
    TATCAACCAA TGAGACTCTA CTCTACTTTA TGGAATGCAG ATAACTGGGC TACAAGAGGT 
    GGTCTCGTCA AGACTGATTG GTCACAAGCT CCTTTCACTG CCTCCTACAC GAACTTCAAT 
    GCTAATAATG CTTGTGTTTG GTTCAACGGT GCATCTTCTT GTGATTCAAA TAATTTCTCC 
    CCTCCTTCTT GGCTTTCAGA GGATCTTGAT TCAGCAAATC TTGATAAGCT TCAATGGGTC 
    CAAACGAACA ACATGATATA TAATTATTGC GCAGATGCCA AGAGGTTTCC CCAGGGATTT 
    CCTCCAGAAT GCAACATGTC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s00900g ( XM_002307004.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002307040.3 Populus trichocarpa probable xyloglucan endotransglucosylase/hydrolase protein 23 (LOC7479149), mRNA.
    Price & Availability↑
    CloneID OPa429213
    Clone ID Related Accession (Same CDS sequence) XM_002307004.3
    Accession Version XM_002307004.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 876bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable xyloglucan endotransglucosylase/hydrolase protein 23
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002307004.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTTCTT TTCTTGCTTC TTCAAGGGTT CCAATGTCGG TGGTATTGGT CTTGTTTACA 
    CTTGCTTCTT TGATGGGGTC ATCTCTTGGT AACTTCTACC AAGACTTCGA TATTATGTGG 
    GGAGATTGGC GTGCTATGAT ACTCAACGAT GGTGAGCTTC TCAATCTCAA TCTTGACCAA 
    GCTTCTGGCT CAGGATTCCA ATCCAAGAAT GAGTATTTGT TCGGAAAGAT TGATATGCAA 
    CTCAAGCTTG TCCCTGGCAA CTCTGCTGGC ACTGTAACTG CCTACTACTT ACAATCAAAA 
    GGGTCGGCCT GGGATGAGAT AGACTTTGAG TTCTTGGGGA ACTTGAGTGG AGATCCTTAC 
    ATTCTTCATA CTAATGTGTA TAGCCAAGGC AAAGGCGACA AGGAGCAACA ATTTTATCTC 
    TGGTTTGATC CAACTGCTGA TTTCCACACC TATTCCATCC TTTGGAACCC ACAAAGAATC 
    ATCTTCTTTG TAGATGGCAC CCCTATTAGG GAGTTCAAGA ACATGGAATC GATTGGTGTT 
    CCATTTCCAA AGTATCAACC AATGAGACTC TACTCTACTT TATGGAATGC AGATAACTGG 
    GCTACAAGAG GTGGTCTCGT CAAGACTGAT TGGTCACAAG CTCCTTTCAC TGCCTCCTAC 
    ACGCACTTCA ATGCTAATAA TGCTTGTGTT TGGTTCAACG GTGCATCTTC TTGTGATTCA 
    AATAATTTCT CCCCTCCTTC TTGGCTTTCA GAGGATCTTG ATTCAGCAAA TCTTGATAAG 
    CTTCAATGGG TCCAAACGAA CAACATGATA TATAATTATT GCGCAGATGC CAAGAGGTTT 
    CCCCAGGGAT TTCCTCCAGA ATGCAACATG TCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307040.3
    CDS72..947
    Translation

    Target ORF information:

    RefSeq Version XM_002307004.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable xyloglucan endotransglucosylase/hydrolase protein 23 (LOC7479149), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307004.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTTCTT TTCTTGCTTC TTCAAGGGTT CCAATGTCGG TGGTATTGGT CTTGTTTACA 
    CTTGCTTCTT TGATGGGGTC ATCTCTTGGT AACTTCTACC AAGACTTCGA TATTATGTGG 
    GGAGATTGGC GTGCTATGAT ACTCAACGAT GGTGAGCTTC TCAATCTCAA TCTTGACCAA 
    GCTTCTGGCT CAGGATTCCA ATCCAAGAAT GAGTATTTGT TCGGAAAGAT TGATATGCAA 
    CTCAAGCTTG TCCCTGGCAA CTCTGCTGGC ACTGTAACTG CCTACTACTT ACAATCAAAA 
    GGGTCGGCCT GGGATGAGAT AGACTTTGAG TTCTTGGGGA ACTTGAGTGG AGATCCTTAC 
    ATTCTTCATA CTAATGTGTA TAGCCAAGGC AAAGGCGACA AGGAGCAACA ATTTTATCTC 
    TGGTTTGATC CAACTGCTGA TTTCCACACC TATTCCATCC TTTGGAACCC ACAAAGAATC 
    ATCTTCTTTG TAGATGGCAC CCCTATTAGG GAGTTCAAGA ACATGGAATC GATTGGTGTT 
    CCATTTCCAA AGTATCAACC AATGAGACTC TACTCTACTT TATGGAATGC AGATAACTGG 
    GCTACAAGAG GTGGTCTCGT CAAGACTGAT TGGTCACAAG CTCCTTTCAC TGCCTCCTAC 
    ACGCACTTCA ATGCTAATAA TGCTTGTGTT TGGTTCAACG GTGCATCTTC TTGTGATTCA 
    AATAATTTCT CCCCTCCTTC TTGGCTTTCA GAGGATCTTG ATTCAGCAAA TCTTGATAAG 
    CTTCAATGGG TCCAAACGAA CAACATGATA TATAATTATT GCGCAGATGC CAAGAGGTTT 
    CCCCAGGGAT TTCCTCCAGA ATGCAACATG TCTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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