ORF » Species Summary » Populus trichocarpa » LOC7478777 cDNA ORF clone

LOC7478777 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7478777 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7478777 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa436668 XM_024608959.1
Latest version!		 Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa21466 XM_002313180.3
Latest version!		 Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
View Old Accession Versions >>
OPa21466 XM_002313180.2 Populus trichocarpa hypothetical protein (POPTR_0009s08230g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7478777 ( XM_024608959.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024464727.1 Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OPa436668
    Clone ID Related Accession (Same CDS sequence) XM_024608959.1
    Accession Version XM_024608959.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1488bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAGGGTTC CTAATTTTAT TGGCGGTAGA CTTGTTAATT CACAGTCATT TGCGTCCATC 
    GATGTCATAA ATCCTGCAAC ACAGCAAGTT GTTTCTCAAG TTCCTCTAAC TACAAATGAG 
    GAGTTCAGAG CTGCAGTTTT TGCAGCAAAG CGAGCTTTTC CACAGTGGAG AGACACACCT 
    ATTACCACCC GTCAACGCAT CATGTTCAAG TTCCAAGAGC TTATTCGGAG AGATATTGAC 
    AAACTAGCCA TGAGCATTAC TACTGAACAT GGAAAGACTT TGAAGGATGC ACATGGTGAT 
    GTATTACGAG GATTAGAGGT GGTGGAACAT GCTTGTGGAT TGGCATCTCT GCAGATTGGG 
    GAGTTTGTTT CCAACATATC GAGTGGAATT GATACCTATA GCATTAGAGA ACCACTTGGT 
    GTCTGTGCTG GGATATGCCC TTTTGAGTTT CCAGCTATGA TCCCACTATG GATTTTTCCA 
    ATTGCTGTCA CATGTGGTAA TACCTTTATT CTAAAGCCAT CGGAGAAGGA CCCAGGGGCT 
    TCTGTGATGC TTGCAGAGTT AGCTATGGAG GCTGGTTTGC CTAATGGTGT CTTAAATATT 
    GTCCATGGCA CTAATGAAAT TATTAATGGT ATTTGCGATG ACGATGATAT TAAAGCTATT 
    TCATTTGTCG GTCCAAATGC GGTTGGTGCT TATGTGTATG CAAGAGCATC AGCTAAAGGA 
    AAACGTACAC AGTCCAATAT TGGAGCCAAA AATCATGCAG TTGTCATGCC CGATGCAAGT 
    GTGGGTGCTA CCATAAATGC TCTAGTTGCT GCTGGCTTTG GTGGTGCAGG ACAAAAGTGC 
    ATGGCCCTGA ACATGGCTGT CTTTGTTGGA GGCCTAGGCC CATGGGAAGA GAAGTTAGTA 
    GAGCATGCCA AGGCACTTAA AGTAACCTCT GGAACAGAAC CGGATGCAGA GCTTGGTCCA 
    GTTATTAGTA AGCAGGAAAA GGAACGGATA ATCACATTGA TTCAAACAGG TGTTGAAAGT 
    GGTGCAAAGC TAGTTCTTGA TGGAAGAAAT ATTGTGGTTG CAGGATATGA AAATGGGAAC 
    TTCATTGGTC CTACCATCTT ATCGGATGTC ACAGTCAACA TGGAATGTTA CAAGGAGGAT 
    ATTTTTGGCC CAGTTCTTCT TTGTATGCAG GCTGATAGCA TCGAAGAAGC CATAAACATT 
    GTTAATGGAA ATAAATATAG CAATGGAGCT TCTATATTTA CAACATCTGG CGTCGCTGCA 
    AGGAAATTCC AGACTGAGGT TGAGGTTGGG CAGGTTGGGA TAAATGTTCC TATCTCGGTT 
    CCGCTGCCAT TCTCCTCGTT TATTAGCGCA AAACCATCTT TTGCTGGAGA TGTCAGCTTT 
    GACGGAAAAG CTGGAATTCA GTTTTACACC CAAGTTAAAA CAGTGACTCA ACAATGGAGA 
    GATTTAGTGA GTGACGATTC GTCATCTCAC CAGTTGCCAA GCTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024464727.1
    CDS205..1692
    Translation

    Target ORF information:

    RefSeq Version XM_024608959.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024608959.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGAGGGTTC CTAATTTTAT TGGCGGTAGA CTTGTTAATT CACAGTCATT TGCGTCCATC 
    GATGTCATAA ATCCTGCAAC ACAGCAAGTT GTTTCTCAAG TTCCTCTAAC TACAAATGAG 
    GAGTTCAGAG CTGCAGTTTT TGCAGCAAAG CGAGCTTTTC CACAGTGGAG AGACACACCT 
    ATTACCACCC GTCAACGCAT CATGTTCAAG TTCCAAGAGC TTATTCGGAG AGATATTGAC 
    AAACTAGCCA TGAGCATTAC TACTGAACAT GGAAAGACTT TGAAGGATGC ACATGGTGAT 
    GTATTACGAG GATTAGAGGT GGTGGAACAT GCTTGTGGAT TGGCATCTCT GCAGATTGGG 
    GAGTTTGTTT CCAACATATC GAGTGGAATT GATACCTATA GCATTAGAGA ACCACTTGGT 
    GTCTGTGCTG GGATATGCCC TTTTGAGTTT CCAGCTATGA TCCCACTATG GATTTTTCCA 
    ATTGCTGTCA CATGTGGTAA TACCTTTATT CTAAAGCCAT CGGAGAAGGA CCCAGGGGCT 
    TCTGTGATGC TTGCAGAGTT AGCTATGGAG GCTGGTTTGC CTAATGGTGT CTTAAATATT 
    GTCCATGGCA CTAATGAAAT TATTAATGGT ATTTGCGATG ACGATGATAT TAAAGCTATT 
    TCATTTGTCG GTCCAAATGC GGTTGGTGCT TATGTGTATG CAAGAGCATC AGCTAAAGGA 
    AAACGTACAC AGTCCAATAT TGGAGCCAAA AATCATGCAG TTGTCATGCC CGATGCAAGT 
    GTGGGTGCTA CCATAAATGC TCTAGTTGCT GCTGGCTTTG GTGGTGCAGG ACAAAAGTGC 
    ATGGCCCTGA ACATGGCTGT CTTTGTTGGA GGCCTAGGCC CATGGGAAGA GAAGTTAGTA 
    GAGCATGCCA AGGCACTTAA AGTAACCTCT GGAACAGAAC CGGATGCAGA GCTTGGTCCA 
    GTTATTAGTA AGCAGGAAAA GGAACGGATA ATCACATTGA TTCAAACAGG TGTTGAAAGT 
    GGTGCAAAGC TAGTTCTTGA TGGAAGAAAT ATTGTGGTTG CAGGATATGA AAATGGGAAC 
    TTCATTGGTC CTACCATCTT ATCGGATGTC ACAGTCAACA TGGAATGTTA CAAGGAGGAT 
    ATTTTTGGCC CAGTTCTTCT TTGTATGCAG GCTGATAGCA TCGAAGAAGC CATAAACATT 
    GTTAATGGAA ATAAATATAG CAATGGAGCT TCTATATTTA CAACATCTGG CGTCGCTGCA 
    AGGAAATTCC AGACTGAGGT TGAGGTTGGG CAGGTTGGGA TAAATGTTCC TATCTCGGTT 
    CCGCTGCCAT TCTCCTCGTT TATTAGCGCA AAACCATCTT TTGCTGGAGA TGTCAGCTTT 
    GACGGAAAAG CTGGAATTCA GTTTTACACC CAAGTTAAAA CAGTGACTCA ACAATGGAGA 
    GATTTAGTGA GTGACGATTC GTCATCTCAC CAGTTGCCAA GCTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478777 ( XM_002313180.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002313216.2 Populus trichocarpa hypothetical protein (POPTR_0009s08230g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa21466
    Clone ID Related Accession (Same CDS sequence) XM_002313180.2 , XM_002313180.3
    Accession Version XM_002313180.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2142bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002313180.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGACGGATA TTCAGAGTAG TAGTGGAAGT GGATTGGATG AAGCTCAAAT GCAGATGCAA 
    CCACCTCCTC CTGGAACTTT TGTAGATCGT GAAGAACTTA TACAACATGT TGGGGACTTT 
    GCTGTATCTC AAGGATATGT TGTAACCATC AAGCAGTCCA AGAGAGAAAG AGTAGTGGTA 
    CTTGGCTGTG ATAGGGGAGG TGTTTACCGT AACAGGAAGA AAGCTGATGA AGAGACTTCG 
    GCTGAACGGA AGCGCAGAAA AAGATCTGGT TCACGACTTA CTAACTGTCC CTTTGAAGCT 
    GTGGGTAAGA AGGATGATGG GTTGTGGGTG CTTACTATTA AAAACGGAAC ACACAACCAT 
    GAGCCACTGA AGGACATTAC AGAACATCCT TCTGCTCGTC GCTTTTCTGA GAGTGAGATT 
    GTGTTGATTA AGGAGATGAC AGAAGCTGGA TTAAAACCTC GCCAGATTCT GAAGCGACTG 
    AGACAAAGCA ATCCAGAGCT TTTGTCCACT CCAAAGCATG TTTACAATGT TAAAGCCAAA 
    CTTCGACAAG GAAATATGAC AGTGAGAAAT TTCAAGTCAT TGAGACCTGA GAAATCTGCT 
    GGAAGGGACA AACATCTCTC AATTGCTGAG CCTTCTTGGA GGCAGCGCTA CCCCATGAGG 
    GTTCCTAATT TTATTGGCGG TAGACTTGTT AATTCACAGT CATTTGCGTC CATCGATGTC 
    ATAAATCCTG CAACACAGCA AGTTGTTTCT CAAGTTCCTC TAACTACAAA TGAGGAGTTC 
    AGAGCTGCAG TTTTTGCAGC AAAGCGAGCT TTTCCACAGT GGAGAGACAC ACCTATTACC 
    ACCCGTCAAC GCATCATGTT CAAGTTCCAA GAGCTTATTC GGAGAGATAT TGACAAACTA 
    GCCATGAGCA TTACTACTGA ACATGGAAAG ACTTTGAAGG ATGCACATGG TGATGTATTA 
    CGAGGATTAG AGGTGGTGGA ACATGCTTGT GGATTGGCAT CTCTGCAGAT TGGGGAGTTT 
    GTTTCCAACA TATCGAGTGG AATTGATACC TATAGCATTA GAGAACCACT TGGTGTCTGT 
    GCTGGGATAT GCCCTTTTGA GTTTCCAGCT ATGATCCCAC TATGGATTTT TCCAATTGCT 
    GTCACATGTG GTAATACCTT TATTCTAAAG CCATCGGAGA AGGACCCAGG GGCTTCTGTG 
    ATGCTTGCAG AGTTAGCTAT GGAGGCTGGT TTGCCTAATG GTGTCTTAAA TATTGTCCAT 
    GGCACTAATG AAATTATTAA TGGTATTTGC GATGACGATG ATATTAAAGC TATTTCATTT 
    GTCGGTCCAA ATGCGGTTGG TGCTTATGTG TATGCAAGAG CATCAGCTAA AGGAAAACGT 
    ACACAGTCCA ATATTGGAGC CAAAAATCAT GCAGTTGTCA TGCCCGATGC AAGTGTGGGT 
    GCTACCATAA ATGCTCTAGT TGCTGCTGGC TTTGGTGGTG CAGGACAAAA GTGCATGGCC 
    CTGAACATGG CTGTCTTTGT TGGAGGCCTA GGCCCATGGG AAGAGAAGTT AGTAGAGCAT 
    GCCAAGGCAC TTAAAGTAAC CTCTGGAACA GAACCGGATG CAGAGCTTGG TCCAGTTATT 
    AGTAAGCAGG AAAAGGAACG GATAATCACA TTGATTCAAA CAGGTGTTGA AAGTGGTGCA 
    AAGCTAGTTC TTGATGGAAG AAATATTGTG GTTGCAGGAT ATGAAAATGG GAACTTCATT 
    GGTCCTACCA TCTTATCGGA TGTCACAGTC AACATGGAAT GTTACAAGGA GGATATTTTT 
    GGCCCAGTTC TTCTTTGTAT GCAGGCTGAT AGCATCGAAG AAGCCATAAA CATTGTTAAT 
    GGAAATAAAT ATAGCAATGG AGCTTCTATA TTTACAACAT CTGGCGTCGC TGCAAGGAAA 
    TTCCAGACTG AGGTTGAGGT TGGGCAGGTT GGGATAAATG TTCCTATCTC GGTTCCGCTG 
    CCATTCTCCT CGTTTATTAG CGCAAAACCA TCTTTTGCTG GAGATGTCAG CTTTGACGGA 
    AAAGCTGGAA TTCAGTTTTA CACCCAAGTT AAAACAGTGA CTCAACAATG GAGAGATTTA 
    GTGAGTGACG ATTCGTCATC TCACCAGTTG CCAAGCTCCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313216.2
    CDS198..2339
    Translation

    Target ORF information:

    RefSeq Version XM_002313180.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s08230g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002313180.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGACGGATA TTCAGAGTAG TAGTGGAAGT GGATTGGATG AAGCTCAAAT GCAGATGCAA 
    CCACCTCCTC CTGGAACTTT TGTAGATCGT GAAGAACTTA TACAACATGT TGGGGACTTT 
    GCTGTATCTC AAGGATATGT TGTAACCATC AAGCAGTCCA AGAGAGAAAG AGTAGTGGTA 
    CTTGGCTGTG ATAGGGGAGG TGTTTACCGT AACAGGAAGA AAGCTGATGA AGAGACTTCG 
    GCTGAACGGA AGCGCAGAAA AAGATCTGGT TCACGACTTA CTAACTGTCC CTTTGAAGCT 
    GTGGGTAAGA AGGATGATGG GTTGTGGGTG CTTACTATTA AAAACGGAAC ACACAACCAT 
    GAGCCACTGA AGGACATTAC AGAACATCCT TCTGCTCGTC GCTTTTCTGA GAGTGAGATT 
    GTGTTGATTA AGGAGATGAC AGAAGCTGGA TTAAAACCTC GCCAGATTCT GAAGCGACTG 
    AGACAAAGCA ATCCAGAGCT TTTGTCCACT CCAAAGCATG TTTACAATGT TAAAGCCAAA 
    CTTCGACAAG GAAATATGAC AGTGAGAAAT TTCAAGTCAT TGAGACCTGA GAAATCTGCT 
    GGAAGGGACA AACATCTCTC AATTGCTGAG CCTTCTTGGA GGCAGCGCTA CCCCATGAGG 
    GTTCCTAATT TTATTGGCGG TAGACTTGTT AATTCACAGT CATTTGCGTC CATCGATGTC 
    ATAAATCCTG CAACACAGCA AGTTGTTTCT CAAGTTCCTC TAACTACAAA TGAGGAGTTC 
    AGAGCTGCAG TTTTTGCAGC AAAGCGAGCT TTTCCACAGT GGAGAGACAC ACCTATTACC 
    ACCCGTCAAC GCATCATGTT CAAGTTCCAA GAGCTTATTC GGAGAGATAT TGACAAACTA 
    GCCATGAGCA TTACTACTGA ACATGGAAAG ACTTTGAAGG ATGCACATGG TGATGTATTA 
    CGAGGATTAG AGGTGGTGGA ACATGCTTGT GGATTGGCAT CTCTGCAGAT TGGGGAGTTT 
    GTTTCCAACA TATCGAGTGG AATTGATACC TATAGCATTA GAGAACCACT TGGTGTCTGT 
    GCTGGGATAT GCCCTTTTGA GTTTCCAGCT ATGATCCCAC TATGGATTTT TCCAATTGCT 
    GTCACATGTG GTAATACCTT TATTCTAAAG CCATCGGAGA AGGACCCAGG GGCTTCTGTG 
    ATGCTTGCAG AGTTAGCTAT GGAGGCTGGT TTGCCTAATG GTGTCTTAAA TATTGTCCAT 
    GGCACTAATG AAATTATTAA TGGTATTTGC GATGACGATG ATATTAAAGC TATTTCATTT 
    GTCGGTCCAA ATGCGGTTGG TGCTTATGTG TATGCAAGAG CATCAGCTAA AGGAAAACGT 
    ACACAGTCCA ATATTGGAGC CAAAAATCAT GCAGTTGTCA TGCCCGATGC AAGTGTGGGT 
    GCTACCATAA ATGCTCTAGT TGCTGCTGGC TTTGGTGGTG CAGGACAAAA GTGCATGGCC 
    CTGAACATGG CTGTCTTTGT TGGAGGCCTA GGCCCATGGG AAGAGAAGTT AGTAGAGCAT 
    GCCAAGGCAC TTAAAGTAAC CTCTGGAACA GAACCGGATG CAGAGCTTGG TCCAGTTATT 
    AGTAAGCAGG AAAAGGAACG GATAATCACA TTGATTCAAA CAGGTGTTGA AAGTGGTGCA 
    AAGCTAGTTC TTGATGGAAG AAATATTGTG GTTGCAGGAT ATGAAAATGG GAACTTCATT 
    GGTCCTACCA TCTTATCGGA TGTCACAGTC AACATGGAAT GTTACAAGGA GGATATTTTT 
    GGCCCAGTTC TTCTTTGTAT GCAGGCTGAT AGCATCGAAG AAGCCATAAA CATTGTTAAT 
    GGAAATAAAT ATAGCAATGG AGCTTCTATA TTTACAACAT CTGGCGTCGC TGCAAGGAAA 
    TTCCAGACTG AGGTTGAGGT TGGGCAGGTT GGGATAAATG TTCCTATCTC GGTTCCGCTG 
    CCATTCTCCT CGTTTATTAG CGCAAAACCA TCTTTTGCTG GAGATGTCAG CTTTGACGGA 
    AAAGCTGGAA TTCAGTTTTA CACCCAAGTT AAAACAGTGA CTCAACAATG GAGAGATTTA 
    GTGAGTGACG ATTCGTCATC TCACCAGTTG CCAAGCTCCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478777 ( XM_002313180.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002313216.2 Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa21466
    Clone ID Related Accession (Same CDS sequence) XM_002313180.2 , XM_002313180.3
    Accession Version XM_002313180.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2142bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002313180.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGACGGATA TTCAGAGTAG TAGTGGAAGT GGATTGGATG AAGCTCAAAT GCAGATGCAA 
    CCACCTCCTC CTGGAACTTT TGTAGATCGT GAAGAACTTA TACAACATGT TGGGGACTTT 
    GCTGTATCTC AAGGATATGT TGTAACCATC AAGCAGTCCA AGAGAGAAAG AGTAGTGGTA 
    CTTGGCTGTG ATAGGGGAGG TGTTTACCGT AACAGGAAGA AAGCTGATGA AGAGACTTCG 
    GCTGAACGGA AGCGCAGAAA AAGATCTGGT TCACGACTTA CTAACTGTCC CTTTGAAGCT 
    GTGGGTAAGA AGGATGATGG GTTGTGGGTG CTTACTATTA AAAACGGAAC ACACAACCAT 
    GAGCCACTGA AGGACATTAC AGAACATCCT TCTGCTCGTC GCTTTTCTGA GAGTGAGATT 
    GTGTTGATTA AGGAGATGAC AGAAGCTGGA TTAAAACCTC GCCAGATTCT GAAGCGACTG 
    AGACAAAGCA ATCCAGAGCT TTTGTCCACT CCAAAGCATG TTTACAATGT TAAAGCCAAA 
    CTTCGACAAG GAAATATGAC AGTGAGAAAT TTCAAGTCAT TGAGACCTGA GAAATCTGCT 
    GGAAGGGACA AACATCTCTC AATTGCTGAG CCTTCTTGGA GGCAGCGCTA CCCCATGAGG 
    GTTCCTAATT TTATTGGCGG TAGACTTGTT AATTCACAGT CATTTGCGTC CATCGATGTC 
    ATAAATCCTG CAACACAGCA AGTTGTTTCT CAAGTTCCTC TAACTACAAA TGAGGAGTTC 
    AGAGCTGCAG TTTTTGCAGC AAAGCGAGCT TTTCCACAGT GGAGAGACAC ACCTATTACC 
    ACCCGTCAAC GCATCATGTT CAAGTTCCAA GAGCTTATTC GGAGAGATAT TGACAAACTA 
    GCCATGAGCA TTACTACTGA ACATGGAAAG ACTTTGAAGG ATGCACATGG TGATGTATTA 
    CGAGGATTAG AGGTGGTGGA ACATGCTTGT GGATTGGCAT CTCTGCAGAT TGGGGAGTTT 
    GTTTCCAACA TATCGAGTGG AATTGATACC TATAGCATTA GAGAACCACT TGGTGTCTGT 
    GCTGGGATAT GCCCTTTTGA GTTTCCAGCT ATGATCCCAC TATGGATTTT TCCAATTGCT 
    GTCACATGTG GTAATACCTT TATTCTAAAG CCATCGGAGA AGGACCCAGG GGCTTCTGTG 
    ATGCTTGCAG AGTTAGCTAT GGAGGCTGGT TTGCCTAATG GTGTCTTAAA TATTGTCCAT 
    GGCACTAATG AAATTATTAA TGGTATTTGC GATGACGATG ATATTAAAGC TATTTCATTT 
    GTCGGTCCAA ATGCGGTTGG TGCTTATGTG TATGCAAGAG CATCAGCTAA AGGAAAACGT 
    ACACAGTCCA ATATTGGAGC CAAAAATCAT GCAGTTGTCA TGCCCGATGC AAGTGTGGGT 
    GCTACCATAA ATGCTCTAGT TGCTGCTGGC TTTGGTGGTG CAGGACAAAA GTGCATGGCC 
    CTGAACATGG CTGTCTTTGT TGGAGGCCTA GGCCCATGGG AAGAGAAGTT AGTAGAGCAT 
    GCCAAGGCAC TTAAAGTAAC CTCTGGAACA GAACCGGATG CAGAGCTTGG TCCAGTTATT 
    AGTAAGCAGG AAAAGGAACG GATAATCACA TTGATTCAAA CAGGTGTTGA AAGTGGTGCA 
    AAGCTAGTTC TTGATGGAAG AAATATTGTG GTTGCAGGAT ATGAAAATGG GAACTTCATT 
    GGTCCTACCA TCTTATCGGA TGTCACAGTC AACATGGAAT GTTACAAGGA GGATATTTTT 
    GGCCCAGTTC TTCTTTGTAT GCAGGCTGAT AGCATCGAAG AAGCCATAAA CATTGTTAAT 
    GGAAATAAAT ATAGCAATGG AGCTTCTATA TTTACAACAT CTGGCGTCGC TGCAAGGAAA 
    TTCCAGACTG AGGTTGAGGT TGGGCAGGTT GGGATAAATG TTCCTATCTC GGTTCCGCTG 
    CCATTCTCCT CGTTTATTAG CGCAAAACCA TCTTTTGCTG GAGATGTCAG CTTTGACGGA 
    AAAGCTGGAA TTCAGTTTTA CACCCAAGTT AAAACAGTGA CTCAACAATG GAGAGATTTA 
    GTGAGTGACG ATTCGTCATC TCACCAGTTG CCAAGCTCCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313216.2
    CDS298..2439
    Translation

    Target ORF information:

    RefSeq Version XM_002313180.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (LOC7478777), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002313180.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    ATGACGGATA TTCAGAGTAG TAGTGGAAGT GGATTGGATG AAGCTCAAAT GCAGATGCAA 
    CCACCTCCTC CTGGAACTTT TGTAGATCGT GAAGAACTTA TACAACATGT TGGGGACTTT 
    GCTGTATCTC AAGGATATGT TGTAACCATC AAGCAGTCCA AGAGAGAAAG AGTAGTGGTA 
    CTTGGCTGTG ATAGGGGAGG TGTTTACCGT AACAGGAAGA AAGCTGATGA AGAGACTTCG 
    GCTGAACGGA AGCGCAGAAA AAGATCTGGT TCACGACTTA CTAACTGTCC CTTTGAAGCT 
    GTGGGTAAGA AGGATGATGG GTTGTGGGTG CTTACTATTA AAAACGGAAC ACACAACCAT 
    GAGCCACTGA AGGACATTAC AGAACATCCT TCTGCTCGTC GCTTTTCTGA GAGTGAGATT 
    GTGTTGATTA AGGAGATGAC AGAAGCTGGA TTAAAACCTC GCCAGATTCT GAAGCGACTG 
    AGACAAAGCA ATCCAGAGCT TTTGTCCACT CCAAAGCATG TTTACAATGT TAAAGCCAAA 
    CTTCGACAAG GAAATATGAC AGTGAGAAAT TTCAAGTCAT TGAGACCTGA GAAATCTGCT 
    GGAAGGGACA AACATCTCTC AATTGCTGAG CCTTCTTGGA GGCAGCGCTA CCCCATGAGG 
    GTTCCTAATT TTATTGGCGG TAGACTTGTT AATTCACAGT CATTTGCGTC CATCGATGTC 
    ATAAATCCTG CAACACAGCA AGTTGTTTCT CAAGTTCCTC TAACTACAAA TGAGGAGTTC 
    AGAGCTGCAG TTTTTGCAGC AAAGCGAGCT TTTCCACAGT GGAGAGACAC ACCTATTACC 
    ACCCGTCAAC GCATCATGTT CAAGTTCCAA GAGCTTATTC GGAGAGATAT TGACAAACTA 
    GCCATGAGCA TTACTACTGA ACATGGAAAG ACTTTGAAGG ATGCACATGG TGATGTATTA 
    CGAGGATTAG AGGTGGTGGA ACATGCTTGT GGATTGGCAT CTCTGCAGAT TGGGGAGTTT 
    GTTTCCAACA TATCGAGTGG AATTGATACC TATAGCATTA GAGAACCACT TGGTGTCTGT 
    GCTGGGATAT GCCCTTTTGA GTTTCCAGCT ATGATCCCAC TATGGATTTT TCCAATTGCT 
    GTCACATGTG GTAATACCTT TATTCTAAAG CCATCGGAGA AGGACCCAGG GGCTTCTGTG 
    ATGCTTGCAG AGTTAGCTAT GGAGGCTGGT TTGCCTAATG GTGTCTTAAA TATTGTCCAT 
    GGCACTAATG AAATTATTAA TGGTATTTGC GATGACGATG ATATTAAAGC TATTTCATTT 
    GTCGGTCCAA ATGCGGTTGG TGCTTATGTG TATGCAAGAG CATCAGCTAA AGGAAAACGT 
    ACACAGTCCA ATATTGGAGC CAAAAATCAT GCAGTTGTCA TGCCCGATGC AAGTGTGGGT 
    GCTACCATAA ATGCTCTAGT TGCTGCTGGC TTTGGTGGTG CAGGACAAAA GTGCATGGCC 
    CTGAACATGG CTGTCTTTGT TGGAGGCCTA GGCCCATGGG AAGAGAAGTT AGTAGAGCAT 
    GCCAAGGCAC TTAAAGTAAC CTCTGGAACA GAACCGGATG CAGAGCTTGG TCCAGTTATT 
    AGTAAGCAGG AAAAGGAACG GATAATCACA TTGATTCAAA CAGGTGTTGA AAGTGGTGCA 
    AAGCTAGTTC TTGATGGAAG AAATATTGTG GTTGCAGGAT ATGAAAATGG GAACTTCATT 
    GGTCCTACCA TCTTATCGGA TGTCACAGTC AACATGGAAT GTTACAAGGA GGATATTTTT 
    GGCCCAGTTC TTCTTTGTAT GCAGGCTGAT AGCATCGAAG AAGCCATAAA CATTGTTAAT 
    GGAAATAAAT ATAGCAATGG AGCTTCTATA TTTACAACAT CTGGCGTCGC TGCAAGGAAA 
    TTCCAGACTG AGGTTGAGGT TGGGCAGGTT GGGATAAATG TTCCTATCTC GGTTCCGCTG 
    CCATTCTCCT CGTTTATTAG CGCAAAACCA TCTTTTGCTG GAGATGTCAG CTTTGACGGA 
    AAAGCTGGAA TTCAGTTTTA CACCCAAGTT AAAACAGTGA CTCAACAATG GAGAGATTTA 
    GTGAGTGACG ATTCGTCATC TCACCAGTTG CCAAGCTCCT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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