LOC7461652 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC7461652
Entrez Gene ID	7461652
Full Name	hypothetical protein
Synonyms	POPTRDRAFT_797985
Gene Type	protein-coding
Organism	Populus trichocarpa(black cottonwood)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002298648.2	XP_002298684.1	hypothetical protein
XM_002298648.3	XP_002298684.1	probable sucrose-phosphate synthase 3

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapman J, Chen GL, Cooper D, Coutinho PM, Couturier J, Covert S, Cronk Q, Cunningham R, Davis J, Degroeve S, Déjardin A, Depamphilis C, Detter J, Dirks B, Dubchak I, Duplessis S, Ehlting J, Ellis B, Gendler K, Goodstein D, Gribskov M, Grimwood J, Groover A, Gunter L, Hamberger B, Heinze B, Helariutta Y, Henrissat B, Holligan D, Holt R, Huang W, Islam-Faridi N, Jones S, Jones-Rhoades M, Jorgensen R, Joshi C, Kangasjärvi J, Karlsson J, Kelleher C, Kirkpatrick R, Kirst M, Kohler A, Kalluri U, Larimer F, Leebens-Mack J, Leplé JC, Locascio P, Lou Y, Lucas S, Martin F, Montanini B, Napoli C, Nelson DR, Nelson C, Nieminen K, Nilsson O, Pereda V, Peter G, Philippe R, Pilate G, Poliakov A, Razumovskaya J, Richardson P, Rinaldi C, Ritland K, Rouzé P, Ryaboy D, Schmutz J, Schrader J, Segerman B, Shin H, Siddiqui A, Sterky F, Terry A, Tsai CJ, Uberbacher E, Unneberg P, Vahala J, Wall K, Wessler S, Yang G, Yin T, Douglas C, Marra M, Sandberg G, Van de Peer Y, Rokhsar D
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC7461652 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7461652 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPa00358	XM_002298648.2 Latest version!	Populus trichocarpa hypothetical protein (POPTR_0001s32500g) mRNA, complete cds.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPa423426	XM_002298648.3 Latest version!	Populus trichocarpa probable sucrose-phosphate synthase 3 (LOC7461652), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC7461652 ( XM_002298648.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002298684.1 Populus trichocarpa hypothetical protein (POPTR_0001s32500g) mRNA, complete cds.

Price & Availability↑

CloneID	OPa00358
Clone ID Related Accession (Same CDS sequence)	XM_002298648.2
Accession Version	XM_002298648.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3210bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1388332800000
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298648.1.

ATGCCTGGAA ATGAGTGGAT AAATGGATAC TTGGAAGCAA TATTGAATAG TGGAGGAGGA 
GCAGGTGCAA TTGAAGAACA CAAGCCTGCA CCAACTGTGA ATTTAAGAGA AACAGGGCAT 
TTTAATCCAA CAAAGTATTT TGTTGAGGAG GTTGTTAGAG GAGTTGATGA GACTGATTTA 
CATAGAACTT GGATAAAAGT TGTTGCCACT CGCAACACCA GGGAACGCAG TTCCAGGCTC 
GAAAACATGT GTTGGCGAAT TTGGCACCTC ACTCGCAAGA AGAAGCAGTT GGAGTGGGAG 
GAACTACAGC GGTTGGCGAA TCGGAGATGG GAAAGGGAAC AAGGACGTCG GGATGCAACC 
GAAGACATGT CTGAGGATTT ATCAGAAGGA GAGAAAGGAG ATGGGTTGGG GGAGCTGGCA 
CAAAGCGAGA CGCCAAGGAA AAAGTTCCAG AGAAGCCTTT CCAACCCGGA AGTGTGGTCG 
GATGATAAGA AGGAAAAGAA ACTCTATATT GTCCTTATCA GTATACATGG TTTGGTCCGA 
GGAGAAAATA TGGAGCTCGG TCGAGATTCT GACACTGGTG GACAGGTCAA ATATGTGGTG 
GAACTTGCTC GTGCACTTGC TAGAATGCCT GGAGTGTACA GGGTAGATCT TTTTACTCGC 
CAGATCTCCT CCCCTGAAGT TGATTGGAGC TACGGTGAAC CAACAGAGAT GCTAACTTCA 
GGCCCTGAAG ATGATGATGG CAATGAGGTG GGAGAGAGCA GTGGGGCATA TATTGTCAGG 
ATTCCCTTTG GTCCACACGA TAAGTATCTC GGAAAAGAAT TACTGTGGCC TTATATTCAA 
GAATTTGTAG ATGGAGCTCT CAGTCACATT CTTAATATGT CAAAAGTTTT GGGTGAACAA 
ATTGGAGGAG GCCAGCCTGT GTGGCCATAT GTAATTCATG GCCATTATGC TGATGCAGGT 
GATAGTGCTG CTCTTTTATC AGGTGCTTTG AATGTTCCTA TGGTTTTAAC GGGACATTCG 
CTTGGGAGAA ACAAGCTGGA ACAGCTTCTT AAACAGGGGC GACAATCAAA GGAGGACATC 
AATTCAACAT ATAAAATAAT GCGGAGGATA GAAGGAGAAG AGCTTTCACT TGATGCTGCA 
GAACTTGTAA TCACAAGTAC CAGACAAGAG ATTGATGAGC AATGGGGACT TTATGATGGG 
TTTGATGTCA AGCTTGAGAA AGTTTTGCGT GCTCGTGCTA GACGTGGTGT CAATTGCCAT 
GGCCGTTACA TGCCAAGAAT GGTGGTTATT CCTCCAGGCA TGGACTTCAG CAGTGTTGTG 
GTTCAAGAAG ATGCTCCTGA GGTCGATGGG GAGCTTGCAA CACTCATCAG CAGTACTGAT 
GGTTCTTCCC CAAAAGCAAT TCCACCAATA TGGTCTGAAA TCATGCGGTT CCTTACAAAT 
CCCCATAAGC CGATGATTTT GGCCTTATCA AGGCCTGATC CAAAGAAGAA TATTACAACT 
CTTTTGAAAG CCTTTGGAGA GTGCCGCCCA TTAAGAGAGC TTGCCAATCT TACACTGATT 
ATGGGAAACA GGGATGATAT AGAGGAGATG ACTGGTGGAA ATGGGAGTGT GCTCACGACA 
GTGTTGAAGA TGATTGACAA GTATGATCTT TATGGGCTGG TCGCCTATCC GAAACATCAC 
AAGCAAGCTG ATGTTCCAGA AATATATCGG CTTGCTGCCA AAACAAAGGG GGTTTTCATA 
AATCCAGCAT TGGTCGAGCC TTTTGGCCTT ACCTTGATTG AGGCAGCAGC TCACGGGCTT 
CCAATGGTGG CTACTAAAAA TGGCGGACCA GTTGACATCC ATCGGGCACT GAACAACGGT 
CTGCTTGTTG ACCCTCATGA TCAGCAAGCT ATTGCTGATG CACTGCTTAA GTTGGTGTCC 
GAAAAGAACT TATGGGCTCT CTGCAGGAAG AATGGCTTGA AGAATATACA CCTGTTCTCA 
TGGCCTGAAC ACTGCCGGAC GTACTTGACC AGGGTAGCAG CCTGCCGGAT GAGGCATCCA 
CAATGGCAAA CTGATACCCC AGAGGATGAG ATAGCTGCAG AAGAGTCATC TCTCAATGAT 
TCGCTCAAGG ATGTGCAGGA TATGTCCCTC AGGCTGTCAA TTGATGGAGA CAAACCTTCT 
CTGAATGGAT CTCTTGACTA TTCAGCTGTG TCTTCTGGGG ACCCTGCACT GCAAGATCAA 
GTACAACGGG TCCTAAACAA GATAAAGAAA CCAGAATCTG AGCCAGTAGT TTCTGAAGGT 
GCAAGGCATG AGGCTGTTGT AAGCAAATAT CCCATGCTGA GGCGACGGCG CAGATTGATT 
GTTATAGCTC TTGACTGCTA CGATAGCAAA GGATTTCCCG AGATGAAAAT GATTCAGATT 
GTGCAAGATA TAATTAAAGC TGTTCGGTCG GACTCACTAT TTGCAAGAGT GACAGGGCTT 
GCTCTATCAA CAGCTATGTC ATTAACAGAA ACAACAGAGT TCTTGACATC AGCAAAGATT 
CACGCAAATG AGTTTGACGC ATTGATTTGT AACAGTGGGG GCGAAGTATA TTACCCCGGT 
ACTTGTACTC AAGTAGATGG AAAGCTTGTT CGAGATCCAG ATTATGCAGC TCATATAGAC 
TACCGTTGGG GCTGCGATGG CCTAAAGAAA ACCATTTGGA AGTTGATGAA TACAACTGAA 
GGTGGGAAAC AATCTGATGA GTCTTCCAAC CCCATCGAGG AAGACAAAAA ATCCAGGAAT 
GCCCATTGCA TAGCATACCT TGTAAAGGAT CGCAGTAAGG TCAAGAGAGT GGATGATTTG 
AGGCAGAAGC TTAGGATGCG AGGTCTCCGT TGTCATCTAA TGTATTGTAG GAACTCAACA 
AGATTGCAAA TTATTCCACA CCTTGCATCA CGCGCGCAAG CACTCAGGTA CCTTTTTGTT 
CGTTGGAGAT TGAATGTTGC CAATATGTTT GTGATTCTTG GTGAAAATGG AGATACCGAT 
TACGAGGAAA TGATATCTGG TGCTCATAAG ACGATAATAT TGAAAGATGT GGTGACAAAG 
GGTTCTGAAG ACTTGCTAAG AACCACAGAT CTAAGAGATG ACATTGTTCC TAAGGAGAGT 
CCCCTGATTG CTTATTTGAG TGGAAAAGCA ACGGCTAGCG AGATCGCTGA TGTTCTGAAG 
CAAGTGTCAA AAGCTTCTGC TGGGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002298684.1
CDS	566..3775
Translation	MPGNEWINGYLEAILNSGGGAGAIEEHKPAPTVNLRETGHFNPTKYFVEEVVRGVDETDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRWEREQGRRDATEDMSEDLSEGEKGDGLGELAQSETPRKKFQRSLSNPEVWSDDKKEKKLYIVLISIHGLVRGENMELGRDSDTGGQVKYVVELARALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTSGPEDDDGNEVGESSGAYIVRIPFGPHDKYLGKELLWPYIQEFVDGALSHILNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSSVVVQEDAPEVDGELATLISSTDGSSPKAIPPIWSEIMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMTGGNGSVLTTVLKMIDKYDLYGLVAYPKHHKQADVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWALCRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPEDEIAAEESSLNDSLKDVQDMSLRLSIDGDKPSLNGSLDYSAVSSGDPALQDQVQRVLNKIKKPESEPVVSEGARHEAVVSKYPMLRRRRRLIVIALDCYDSKGFPEMKMIQIVQDIIKAVRSDSLFARVTGLALSTAMSLTETTEFLTSAKIHANEFDALICNSGGEVYYPGTCTQVDGKLVRDPDYAAHIDYRWGCDGLKKTIWKLMNTTEGGKQSDESSNPIEEDKKSRNAHCIAYLVKDRSKVKRVDDLRQKLRMRGLRCHLMYCRNSTRLQIIPHLASRAQALRYLFVRWRLNVANMFVILGENGDTDYEEMISGAHKTIILKDVVTKGSEDLLRTTDLRDDIVPKESPLIAYLSGKATASEIADVLKQVSKASAGM

Target ORF information:

RefSeq Version	XM_002298648.2
Organism	Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
Definition	Populus trichocarpa hypothetical protein (POPTR_0001s32500g) mRNA, complete cds.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002298648.2

ORF Insert Sequence:

ATGCCTGGAA ATGAGTGGAT AAATGGATAC TTGGAAGCAA TATTGAATAG TGGAGGAGGA 
GCAGGTGCAA TTGAAGAACA CAAGCCTGCA CCAACTGTGA ATTTAAGAGA AACAGGGCAT 
TTTAATCCAA CAAAGTATTT TGTTGAGGAG GTTGTTAGAG GAGTTGATGA GACTGATTTA 
CATAGAACTT GGATAAAAGT TGTTGCCACT CGCAACACCA GGGAACGCAG TTCCAGGCTC 
GAAAACATGT GTTGGCGAAT TTGGCACCTC ACTCGCAAGA AGAAGCAGTT GGAGTGGGAG 
GAACTACAGC GGTTGGCGAA TCGGAGATGG GAAAGGGAAC AAGGACGTCG GGATGCAACC 
GAAGACATGT CTGAGGATTT ATCAGAAGGA GAGAAAGGAG ATGGGTTGGG GGAGCTGGCA 
CAAAGCGAGA CGCCAAGGAA AAAGTTCCAG AGAAGCCTTT CCAACCCGGA AGTGTGGTCG 
GATGATAAGA AGGAAAAGAA ACTCTATATT GTCCTTATCA GTATACATGG TTTGGTCCGA 
GGAGAAAATA TGGAGCTCGG TCGAGATTCT GACACTGGTG GACAGGTCAA ATATGTGGTG 
GAACTTGCTC GTGCACTTGC TAGAATGCCT GGAGTGTACA GGGTAGATCT TTTTACTCGC 
CAGATCTCCT CCCCTGAAGT TGATTGGAGC TACGGTGAAC CAACAGAGAT GCTAACTTCA 
GGCCCTGAAG ATGATGATGG CAATGAGGTG GGAGAGAGCA GTGGGGCATA TATTGTCAGG 
ATTCCCTTTG GTCCACACGA TAAGTATCTC GGAAAAGAAT TACTGTGGCC TTATATTCAA 
GAATTTGTAG ATGGAGCTCT CAGTCACATT CTTAATATGT CAAAAGTTTT GGGTGAACAA 
ATTGGAGGAG GCCAGCCTGT GTGGCCATAT GTAATTCATG GCCATTATGC TGATGCAGGT 
GATAGTGCTG CTCTTTTATC AGGTGCTTTG AATGTTCCTA TGGTTTTAAC GGGACATTCG 
CTTGGGAGAA ACAAGCTGGA ACAGCTTCTT AAACAGGGGC GACAATCAAA GGAGGACATC 
AATTCAACAT ATAAAATAAT GCGGAGGATA GAAGGAGAAG AGCTTTCACT TGATGCTGCA 
GAACTTGTAA TCACAAGTAC CAGACAAGAG ATTGATGAGC AATGGGGACT TTATGATGGG 
TTTGATGTCA AGCTTGAGAA AGTTTTGCGT GCTCGTGCTA GACGTGGTGT CAATTGCCAT 
GGCCGTTACA TGCCAAGAAT GGTGGTTATT CCTCCAGGCA TGGACTTCAG CAGTGTTGTG 
GTTCAAGAAG ATGCTCCTGA GGTCGATGGG GAGCTTGCAA CACTCATCAG CAGTACTGAT 
GGTTCTTCCC CAAAAGCAAT TCCACCAATA TGGTCTGAAA TCATGCGGTT CCTTACAAAT 
CCCCATAAGC CGATGATTTT GGCCTTATCA AGGCCTGATC CAAAGAAGAA TATTACAACT 
CTTTTGAAAG CCTTTGGAGA GTGCCGCCCA TTAAGAGAGC TTGCCAATCT TACACTGATT 
ATGGGAAACA GGGATGATAT AGAGGAGATG ACTGGTGGAA ATGGGAGTGT GCTCACGACA 
GTGTTGAAGA TGATTGACAA GTATGATCTT TATGGGCTGG TCGCCTATCC GAAACATCAC 
AAGCAAGCTG ATGTTCCAGA AATATATCGG CTTGCTGCCA AAACAAAGGG GGTTTTCATA 
AATCCAGCAT TGGTCGAGCC TTTTGGCCTT ACCTTGATTG AGGCAGCAGC TCACGGGCTT 
CCAATGGTGG CTACTAAAAA TGGCGGACCA GTTGACATCC ATCGGGCACT GAACAACGGT 
CTGCTTGTTG ACCCTCATGA TCAGCAAGCT ATTGCTGATG CACTGCTTAA GTTGGTGTCC 
GAAAAGAACT TATGGGCTCT CTGCAGGAAG AATGGCTTGA AGAATATACA CCTGTTCTCA 
TGGCCTGAAC ACTGCCGGAC GTACTTGACC AGGGTAGCAG CCTGCCGGAT GAGGCATCCA 
CAATGGCAAA CTGATACCCC AGAGGATGAG ATAGCTGCAG AAGAGTCATC TCTCAATGAT 
TCGCTCAAGG ATGTGCAGGA TATGTCCCTC AGGCTGTCAA TTGATGGAGA CAAACCTTCT 
CTGAATGGAT CTCTTGACTA TTCAGCTGTG TCTTCTGGGG ACCCTGCACT GCAAGATCAA 
GTACAACGGG TCCTAAACAA GATAAAGAAA CCAGAATCTG AGCCAGTAGT TTCTGAAGGT 
GCAAGGCATG AGGCTGTTGT AAGCAAATAT CCCATGCTGA GGCGACGGCG CAGATTGATT 
GTTATAGCTC TTGACTGCTA CGATAGCAAA GGATTTCCCG AGATGAAAAT GATTCAGATT 
GTGCAAGATA TAATTAAAGC TGTTCGGTCG GACTCACTAT TTGCAAGAGT GACAGGGCTT 
GCTCTATCAA CAGCTATGTC ATTAACAGAA ACAACAGAGT TCTTGACATC AGCAAAGATT 
CACGCAAATG AGTTTGACGC ATTGATTTGT AACAGTGGGG GCGAAGTATA TTACCCCGGT 
ACTTGTACTC AAGTAGATGG AAAGCTTGTT CGAGATCCAG ATTATGCAGC TCATATAGAC 
TACCGTTGGG GCTGCGATGG CCTAAAGAAA ACCATTTGGA AGTTGATGAA TACAACTGAA 
GGTGGGAAAC AATCTGATGA GTCTTCCAAC CCCATCGAGG AAGACAAAAA ATCCAGGAAT 
GCCCATTGCA TAGCATACCT TGTAAAGGAT CGCAGTAAGG TCAAGAGAGT GGATGATTTG 
AGGCAGAAGC TTAGGATGCG AGGTCTCCGT TGTCATCTAA TGTATTGTAG GAACTCAACA 
AGATTGCAAA TTATTCCACA CCTTGCATCA CGCGCGCAAG CACTCAGGTA CCTTTTTGTT 
CGTTGGAGAT TGAATGTTGC CAATATGTTT GTGATTCTTG GTGAAAATGG AGATACCGAT 
TACGAGGAAA TGATATCTGG TGCTCATAAG ACGATAATAT TGAAAGATGT GGTGACAAAG 
GGTTCTGAAG ACTTGCTAAG AACCACAGAT CTAAGAGATG ACATTGTTCC TAAGGAGAGT 
CCCCTGATTG CTTATTTGAG TGGAAAAGCA ACGGCTAGCG AGATCGCTGA TGTTCTGAAG 
CAAGTGTCAA AAGCTTCTGC TGGGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC7461652 ( XM_002298648.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002298684.1 Populus trichocarpa probable sucrose-phosphate synthase 3 (LOC7461652), mRNA.

Price & Availability↑

CloneID	OPa423426
Clone ID Related Accession (Same CDS sequence)	XM_002298648.3
Accession Version	XM_002298648.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3210bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1523116800000
Organism	Populus trichocarpa(black cottonwood)
Product	probable sucrose-phosphate synthase 3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002298648.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCTGGAA ATGAGTGGAT AAATGGATAC TTGGAAGCAA TATTGAATAG TGGAGGAGGA 
GCAGGTGCAA TTGAAGAACA CAAGCCTGCA CCAACTGTGA ATTTAAGAGA AACAGGGCAT 
TTTAATCCAA CAAAGTATTT TGTTGAGGAG GTTGTTAGAG GAGTTGATGA GACTGATTTA 
CATAGAACTT GGATAAAAGT TGTTGCCACT CGCAACACCA GGGAACGCAG TTCCAGGCTC 
GAAAACATGT GTTGGCGAAT TTGGCACCTC ACTCGCAAGA AGAAGCAGTT GGAGTGGGAG 
GAACTACAGC GGTTGGCGAA TCGGAGATGG GAAAGGGAAC AAGGACGTCG GGATGCAACC 
GAAGACATGT CTGAGGATTT ATCAGAAGGA GAGAAAGGAG ATGGGTTGGG GGAGCTGGCA 
CAAAGCGAGA CGCCAAGGAA AAAGTTCCAG AGAAGCCTTT CCAACCCGGA AGTGTGGTCG 
GATGATAAGA AGGAAAAGAA ACTCTATATT GTCCTTATCA GTATACATGG TTTGGTCCGA 
GGAGAAAATA TGGAGCTCGG TCGAGATTCT GACACTGGTG GACAGGTCAA ATATGTGGTG 
GAACTTGCTC GTGCACTTGC TAGAATGCCT GGAGTGTACA GGGTAGATCT TTTTACTCGC 
CAGATCTCCT CCCCTGAAGT TGATTGGAGC TACGGTGAAC CAACAGAGAT GCTAACTTCA 
GGCCCTGAAG ATGATGATGG CAATGAGGTG GGAGAGAGCA GTGGGGCATA TATTGTCAGG 
ATTCCCTTTG GTCCACACGA TAAGTATCTC GGAAAAGAAT TACTGTGGCC TTATATTCAA 
GAATTTGTAG ATGGAGCTCT CAGTCACATT CTTAATATGT CAAAAGTTTT GGGTGAACAA 
ATTGGAGGAG GCCAGCCTGT GTGGCCATAT GTAATTCATG GCCATTATGC TGATGCAGGT 
GATAGTGCTG CTCTTTTATC AGGTGCTTTG AATGTTCCTA TGGTTTTAAC GGGACATTCG 
CTTGGGAGAA ACAAGCTGGA ACAGCTTCTT AAACAGGGGC GACAATCAAA GGAGGACATC 
AATTCAACAT ATAAAATAAT GCGGAGGATA GAAGGAGAAG AGCTTTCACT TGATGCTGCA 
GAACTTGTAA TCACAAGTAC CAGACAAGAG ATTGATGAGC AATGGGGACT TTATGATGGG 
TTTGATGTCA AGCTTGAGAA AGTTTTGCGT GCTCGTGCTA GACGTGGTGT CAATTGCCAT 
GGCCGTTACA TGCCAAGAAT GGTGGTTATT CCTCCAGGCA TGGACTTCAG CAGTGTTGTG 
GTTCAAGAAG ATGCTCCTGA GGTCGATGGG GAGCTTGCAA CACTCATCAG CAGTACTGAT 
GGTTCTTCCC CAAAAGCAAT TCCACCAATA TGGTCTGAAA TCATGCGGTT CCTTACAAAT 
CCCCATAAGC CGATGATTTT GGCCTTATCA AGGCCTGATC CAAAGAAGAA TATTACAACT 
CTTTTGAAAG CCTTTGGAGA GTGCCGCCCA TTAAGAGAGC TTGCCAATCT TACACTGATT 
ATGGGAAACA GGGATGATAT AGAGGAGATG ACTGGTGGAA ATGGGAGTGT GCTCACGACA 
GTGTTGAAGA TGATTGACAA GTATGATCTT TATGGGCTGG TCGCCTATCC GAAACATCAC 
AAGCAAGCTG ATGTTCCAGA AATATATCGG CTTGCTGCCA AAACAAAGGG GGTTTTCATA 
AATCCAGCAT TGGTCGAGCC TTTTGGCCTT ACCTTGATTG AGGCAGCAGC TCACGGGCTT 
CCAATGGTGG CTACTAAAAA TGGCGGACCA GTTGACATCC ATCGGGCACT GAACAACGGT 
CTGCTTGTTG ACCCTCATGA TCAGCAAGCT ATTGCTGATG CACTGCTTAA GTTGGTGTCC 
GAAAAGAACT TATGGGCTCT CTGCAGGAAG AATGGCTTGA AGAATATACA CCTGTTCTCA 
TGGCCTGAAC ACTGCCGGAC GTACTTGACC AGGGTAGCAG CCTGCCGGAT GAGGCATCCA 
CAATGGCAAA CTGATACCCC AGAGGATGAG ATAGCTGCAG AAGAGTCATC TCTCAATGAT 
TCGCTCAAGG ATGTGCAGGA TATGTCCCTC AGGCTGTCAA TTGATGGAGA CAAACCTTCT 
CTGAATGGAT CTCTTGACTA TTCAGCTGTG TCTTCTGGGG ACCCTGCACT GCAAGATCAA 
GTACAACGGG TCCTAAACAA GATAAAGAAA CCAGAATCTG AGCCAGTAGT TTCTGAAGGT 
GCAAGGCATG AGGCTGTTGT AAGCAAATAT CCCATGCTGA GGCGACGGCG CAGATTGATT 
GTTATAGCTC TTGACTGCTA CGATAGCAAA GGATTTCCCG AGATGAAAAT GATTCAGATT 
GTGCAAGATA TAATTAAAGC TGTTCGGTCA GACTCACTAT TTGCAAGAGT GACAGGGCTT 
GCTCTATCAA CAGCTATGTC ATTAACAGAA ACAACAGAGT TCTTGACATC AGCAAAGATT 
CACGCAAATG AGTTTGACGC ATTGATTTGT AACAGTGGGG GCGAAGTATA TTACCCCGGT 
ACTTGTACTC AAGTAGATGG AAAGCTTGTT CGAGATCCAG ATTATGCAGC TCATATAGAC 
TACCGTTGGG GCTGCGATGG CCTAAAGAAA ACCATTTGGA AGTTGATGAA TACAACTGAA 
GGTGGGAAAC AATCTGATGA GTCTTCCAAC CCCATCGAGG AAGACAAAAA ATCCAGGAAT 
GCCCATTGCA TAGCATACCT TGTAAAGGAT CGCAGTAAGG TCAAGAGAGT GGATGATTTG 
AGGCAGAAGC TTAGGATGCG AGGTCTCCGT TGTCATCTAA TGTATTGTAG GAACTCAACA 
AGATTGCAAA TTATTCCACA CCTTGCATCA CGCGCGCAAG CACTCAGGTA CCTTTTTGTT 
CGTTGGAGAT TGAATGTTGC CAATATGTTT GTGATTCTTG GTGAAAATGG AGATACCGAT 
TACGAGGAAA TGATATCTGG TGCTCATAAG ACGATAATAT TGAAAGATGT GGTGACAAAG 
GGTTCTGAAG ACTTGCTAAG AACCACAGAC CTAAGAGATG ACATTGTTCC TAAGGAGAGT 
CCCCTGATTG CTTATTTGAG TGGAAAAGCA ACGGCTAGCG AGATCGCTGA TGTTCTGAAG 
CAAGTGTCAA AAGCTTCTGC TGGGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002298684.1
CDS	604..3813
Translation	MPGNEWINGYLEAILNSGGGAGAIEEHKPAPTVNLRETGHFNPTKYFVEEVVRGVDETDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEELQRLANRRWEREQGRRDATEDMSEDLSEGEKGDGLGELAQSETPRKKFQRSLSNPEVWSDDKKEKKLYIVLISIHGLVRGENMELGRDSDTGGQVKYVVELARALARMPGVYRVDLFTRQISSPEVDWSYGEPTEMLTSGPEDDDGNEVGESSGAYIVRIPFGPHDKYLGKELLWPYIQEFVDGALSHILNMSKVLGEQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSKEDINSTYKIMRRIEGEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVNCHGRYMPRMVVIPPGMDFSSVVVQEDAPEVDGELATLISSTDGSSPKAIPPIWSEIMRFLTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIEEMTGGNGSVLTTVLKMIDKYDLYGLVAYPKHHKQADVPEIYRLAAKTKGVFINPALVEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQQAIADALLKLVSEKNLWALCRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWQTDTPEDEIAAEESSLNDSLKDVQDMSLRLSIDGDKPSLNGSLDYSAVSSGDPALQDQVQRVLNKIKKPESEPVVSEGARHEAVVSKYPMLRRRRRLIVIALDCYDSKGFPEMKMIQIVQDIIKAVRSDSLFARVTGLALSTAMSLTETTEFLTSAKIHANEFDALICNSGGEVYYPGTCTQVDGKLVRDPDYAAHIDYRWGCDGLKKTIWKLMNTTEGGKQSDESSNPIEEDKKSRNAHCIAYLVKDRSKVKRVDDLRQKLRMRGLRCHLMYCRNSTRLQIIPHLASRAQALRYLFVRWRLNVANMFVILGENGDTDYEEMISGAHKTIILKDVVTKGSEDLLRTTDLRDDIVPKESPLIAYLSGKATASEIADVLKQVSKASAGM

Target ORF information:

RefSeq Version	XM_002298648.3
Organism	Populus trichocarpa(black cottonwood)
Definition	Populus trichocarpa probable sucrose-phosphate synthase 3 (LOC7461652), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002298648.3

ORF Insert Sequence:

ATGCCTGGAA ATGAGTGGAT AAATGGATAC TTGGAAGCAA TATTGAATAG TGGAGGAGGA 
GCAGGTGCAA TTGAAGAACA CAAGCCTGCA CCAACTGTGA ATTTAAGAGA AACAGGGCAT 
TTTAATCCAA CAAAGTATTT TGTTGAGGAG GTTGTTAGAG GAGTTGATGA GACTGATTTA 
CATAGAACTT GGATAAAAGT TGTTGCCACT CGCAACACCA GGGAACGCAG TTCCAGGCTC 
GAAAACATGT GTTGGCGAAT TTGGCACCTC ACTCGCAAGA AGAAGCAGTT GGAGTGGGAG 
GAACTACAGC GGTTGGCGAA TCGGAGATGG GAAAGGGAAC AAGGACGTCG GGATGCAACC 
GAAGACATGT CTGAGGATTT ATCAGAAGGA GAGAAAGGAG ATGGGTTGGG GGAGCTGGCA 
CAAAGCGAGA CGCCAAGGAA AAAGTTCCAG AGAAGCCTTT CCAACCCGGA AGTGTGGTCG 
GATGATAAGA AGGAAAAGAA ACTCTATATT GTCCTTATCA GTATACATGG TTTGGTCCGA 
GGAGAAAATA TGGAGCTCGG TCGAGATTCT GACACTGGTG GACAGGTCAA ATATGTGGTG 
GAACTTGCTC GTGCACTTGC TAGAATGCCT GGAGTGTACA GGGTAGATCT TTTTACTCGC 
CAGATCTCCT CCCCTGAAGT TGATTGGAGC TACGGTGAAC CAACAGAGAT GCTAACTTCA 
GGCCCTGAAG ATGATGATGG CAATGAGGTG GGAGAGAGCA GTGGGGCATA TATTGTCAGG 
ATTCCCTTTG GTCCACACGA TAAGTATCTC GGAAAAGAAT TACTGTGGCC TTATATTCAA 
GAATTTGTAG ATGGAGCTCT CAGTCACATT CTTAATATGT CAAAAGTTTT GGGTGAACAA 
ATTGGAGGAG GCCAGCCTGT GTGGCCATAT GTAATTCATG GCCATTATGC TGATGCAGGT 
GATAGTGCTG CTCTTTTATC AGGTGCTTTG AATGTTCCTA TGGTTTTAAC GGGACATTCG 
CTTGGGAGAA ACAAGCTGGA ACAGCTTCTT AAACAGGGGC GACAATCAAA GGAGGACATC 
AATTCAACAT ATAAAATAAT GCGGAGGATA GAAGGAGAAG AGCTTTCACT TGATGCTGCA 
GAACTTGTAA TCACAAGTAC CAGACAAGAG ATTGATGAGC AATGGGGACT TTATGATGGG 
TTTGATGTCA AGCTTGAGAA AGTTTTGCGT GCTCGTGCTA GACGTGGTGT CAATTGCCAT 
GGCCGTTACA TGCCAAGAAT GGTGGTTATT CCTCCAGGCA TGGACTTCAG CAGTGTTGTG 
GTTCAAGAAG ATGCTCCTGA GGTCGATGGG GAGCTTGCAA CACTCATCAG CAGTACTGAT 
GGTTCTTCCC CAAAAGCAAT TCCACCAATA TGGTCTGAAA TCATGCGGTT CCTTACAAAT 
CCCCATAAGC CGATGATTTT GGCCTTATCA AGGCCTGATC CAAAGAAGAA TATTACAACT 
CTTTTGAAAG CCTTTGGAGA GTGCCGCCCA TTAAGAGAGC TTGCCAATCT TACACTGATT 
ATGGGAAACA GGGATGATAT AGAGGAGATG ACTGGTGGAA ATGGGAGTGT GCTCACGACA 
GTGTTGAAGA TGATTGACAA GTATGATCTT TATGGGCTGG TCGCCTATCC GAAACATCAC 
AAGCAAGCTG ATGTTCCAGA AATATATCGG CTTGCTGCCA AAACAAAGGG GGTTTTCATA 
AATCCAGCAT TGGTCGAGCC TTTTGGCCTT ACCTTGATTG AGGCAGCAGC TCACGGGCTT 
CCAATGGTGG CTACTAAAAA TGGCGGACCA GTTGACATCC ATCGGGCACT GAACAACGGT 
CTGCTTGTTG ACCCTCATGA TCAGCAAGCT ATTGCTGATG CACTGCTTAA GTTGGTGTCC 
GAAAAGAACT TATGGGCTCT CTGCAGGAAG AATGGCTTGA AGAATATACA CCTGTTCTCA 
TGGCCTGAAC ACTGCCGGAC GTACTTGACC AGGGTAGCAG CCTGCCGGAT GAGGCATCCA 
CAATGGCAAA CTGATACCCC AGAGGATGAG ATAGCTGCAG AAGAGTCATC TCTCAATGAT 
TCGCTCAAGG ATGTGCAGGA TATGTCCCTC AGGCTGTCAA TTGATGGAGA CAAACCTTCT 
CTGAATGGAT CTCTTGACTA TTCAGCTGTG TCTTCTGGGG ACCCTGCACT GCAAGATCAA 
GTACAACGGG TCCTAAACAA GATAAAGAAA CCAGAATCTG AGCCAGTAGT TTCTGAAGGT 
GCAAGGCATG AGGCTGTTGT AAGCAAATAT CCCATGCTGA GGCGACGGCG CAGATTGATT 
GTTATAGCTC TTGACTGCTA CGATAGCAAA GGATTTCCCG AGATGAAAAT GATTCAGATT 
GTGCAAGATA TAATTAAAGC TGTTCGGTCA GACTCACTAT TTGCAAGAGT GACAGGGCTT 
GCTCTATCAA CAGCTATGTC ATTAACAGAA ACAACAGAGT TCTTGACATC AGCAAAGATT 
CACGCAAATG AGTTTGACGC ATTGATTTGT AACAGTGGGG GCGAAGTATA TTACCCCGGT 
ACTTGTACTC AAGTAGATGG AAAGCTTGTT CGAGATCCAG ATTATGCAGC TCATATAGAC 
TACCGTTGGG GCTGCGATGG CCTAAAGAAA ACCATTTGGA AGTTGATGAA TACAACTGAA 
GGTGGGAAAC AATCTGATGA GTCTTCCAAC CCCATCGAGG AAGACAAAAA ATCCAGGAAT 
GCCCATTGCA TAGCATACCT TGTAAAGGAT CGCAGTAAGG TCAAGAGAGT GGATGATTTG 
AGGCAGAAGC TTAGGATGCG AGGTCTCCGT TGTCATCTAA TGTATTGTAG GAACTCAACA 
AGATTGCAAA TTATTCCACA CCTTGCATCA CGCGCGCAAG CACTCAGGTA CCTTTTTGTT 
CGTTGGAGAT TGAATGTTGC CAATATGTTT GTGATTCTTG GTGAAAATGG AGATACCGAT 
TACGAGGAAA TGATATCTGG TGCTCATAAG ACGATAATAT TGAAAGATGT GGTGACAAAG 
GGTTCTGAAG ACTTGCTAAG AACCACAGAC CTAAGAGATG ACATTGTTCC TAAGGAGAGT 
CCCCTGATTG CTTATTTGAG TGGAAAAGCA ACGGCTAGCG AGATCGCTGA TGTTCTGAAG 
CAAGTGTCAA AAGCTTCTGC TGGGATGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D

REQUEST A QUOTE

EMAIL

gene@genscript.com

PHONE

1-877-436-7274

ONLINE FORM

Online Quote Submission

ONLINE FORM

Online Quote Submission

LOC7461652 cDNA ORF clone, Populus trichocarpa(black cottonwood)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Most Popular Services

Services & Products

News & Blogs

REQUEST A QUOTE

EMAIL

PHONE

ONLINE FORM

ONLINE FORM