ORF » Species Summary » Populus trichocarpa » POPTR_0027s00390g cDNA ORF clone

POPTR_0027s00390g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0027s00390g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0027s00390g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa39207 XM_006389303.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0027s00390g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426598 XM_024597667.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426598 XM_024597669.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X5, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426598 XM_024597666.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426598 XM_024597668.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X4, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426599 XM_024597670.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X6, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa426600 XM_024597671.1
Latest version!		 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X7, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0027s00390g ( XM_006389303.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006389365.1 Populus trichocarpa hypothetical protein (POPTR_0027s00390g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa39207
    Clone ID Related Accession (Same CDS sequence) XM_006389303.1
    Accession Version XM_006389303.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 594bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006256266). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGCGAAAAA TGGGTTCTTC ATCAACTGTA GATATTTCAG CAATGCAGGA AATTATGTTG 
    GAGTTTCGTG CTGGTAAAAT GGTTTTCGTT GGAAAAAAGT TTGTTCCTGA TTCTCGAAAA 
    GGACTTGTTC GCATTGGAAG GGGTGATGAG GGTTTGCTTC ATTTCCAGTG GCTTGATAGG 
    AATTTGAATG CTGTAGAAGA TGTGTCATAC AACGTCGCTG CTTTATCTTG TTGCCTGGTA 
    GAGTTCCTTG ATGAAGAAAA GCCTGTTGCT TCTACTCCTT TCCAAGCTTT TGAAGACATG 
    CTTGAAGATA ATATCTCATC AAGGACTGGA AACTTAGTTG TCCCAGACCT TGGTGCAGAA 
    GTAATGAGTG ATGTAAACTC TTCATCAGAA CCAGTGAAAT TGGAAGACTT GCAAAGAATC 
    CTGAGTAATA TTGGTTCTGG AGGTAGTTCG GGTGATCCAG ATGAAGTCAA TTTTACAAGG 
    TTTAACTCTT CTTTTTGTTT GAAGGTTCTC CGAACCGGAC AAATAGATTT GTCTCAATTT 
    GGGATCAACC CCAGTAAATG TGAGTGGTTT GTGGCTCCAG AACCTGTAGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006389365.1
    CDS47..640
    Translation

    Target ORF information:

    RefSeq Version XM_006389303.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0027s00390g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006389303.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGCGAAAAA TGGGTTCTTC ATCAACTGTA GATATTTCAG CAATGCAGGA AATTATGTTG 
    GAGTTTCGTG CTGGTAAAAT GGTTTTCGTT GGAAAAAAGT TTGTTCCTGA TTCTCGAAAA 
    GGACTTGTTC GCATTGGAAG GGGTGATGAG GGTTTGCTTC ATTTCCAGTG GCTTGATAGG 
    AATTTGAATG CTGTAGAAGA TGTGTCATAC AACGTCGCTG CTTTATCTTG TTGCCTGGTA 
    GAGTTCCTTG ATGAAGAAAA GCCTGTTGCT TCTACTCCTT TCCAAGCTTT TGAAGACATG 
    CTTGAAGATA ATATCTCATC AAGGACTGGA AACTTAGTTG TCCCAGACCT TGGTGCAGAA 
    GTAATGAGTG ATGTAAACTC TTCATCAGAA CCAGTGAAAT TGGAAGACTT GCAAAGAATC 
    CTGAGTAATA TTGGTTCTGG AGGTAGTTCG GGTGATCCAG ATGAAGTCAA TTTTACAAGG 
    TTTAACTCTT CTTTTTGTTT GAAGGTTCTC CGAACCGGAC AAATAGATTT GTCTCAATTT 
    GGGATCAACC CCAGTAAATG TGAGTGGTTT GTGGCTCCAG AACCTGTAGC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597667.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453435.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa426598
    Clone ID Related Accession (Same CDS sequence) XM_024597667.1 , XM_024597668.1 , XM_024597666.1 , XM_024597669.1
    Accession Version XM_024597667.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 540bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453435.1
    CDS433..972
    Translation

    Target ORF information:

    RefSeq Version XM_024597667.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597667.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597668.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453436.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X4, mRNA.
    Price & Availability↑
    CloneID OPa426598
    Clone ID Related Accession (Same CDS sequence) XM_024597667.1 , XM_024597668.1 , XM_024597666.1 , XM_024597669.1
    Accession Version XM_024597668.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 540bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453436.1
    CDS461..1000
    Translation

    Target ORF information:

    RefSeq Version XM_024597668.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X4, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597668.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597666.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453434.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa426598
    Clone ID Related Accession (Same CDS sequence) XM_024597667.1 , XM_024597668.1 , XM_024597666.1 , XM_024597669.1
    Accession Version XM_024597666.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 540bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453434.1
    CDS438..977
    Translation

    Target ORF information:

    RefSeq Version XM_024597666.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597666.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597669.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453437.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X5, mRNA.
    Price & Availability↑
    CloneID OPa426598
    Clone ID Related Accession (Same CDS sequence) XM_024597667.1 , XM_024597668.1 , XM_024597666.1 , XM_024597669.1
    Accession Version XM_024597669.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 540bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453437.1
    CDS340..879
    Translation

    Target ORF information:

    RefSeq Version XM_024597669.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X5, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597669.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGA CTGGAAACTC AGTTGTCCCA GACCTTGGTG CAGAAGTAAT GAGTGATGTA 
    AACTCTTCAT CAGAACCAGT GAAATTGGAA GACTTGCAAA GAATCCTGAG TAATATTGGT 
    GCTGGAGGTG TGTTCTGCTT AGATAGTGCA AGTGACCATA TCCTTGTTTG TTGTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597670.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453438.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X6, mRNA.
    Price & Availability↑
    CloneID OPa426599
    Clone ID Related Accession (Same CDS sequence) XM_024597670.1
    Accession Version XM_024597670.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 444bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG AGCCAAAAGC TAAAGATGAT TCACAATTAT GTAGCTCTTT CAACTATTAT 
    ATTAATCGTC CATTTGTTGA TGAAGAAGAG CCTGATGCTT CTACTCCTTT CCAAGTTTTT 
    GAAGACATGC TTGAAGATAA TATCTCATCA AGGACTGGAA ACTCAGTTGT CCCAGACCTT 
    GGTGCAGAAG TAATGAGTGA TGTAAACTCT TCATCAGAAC CAGTGAAATT GGAAGACTTG 
    CAAAGAATCC TGAGTAATAT TGGTGCTGGA GGTGTGTTCT GCTTAGATAG TGCAAGTGAC 
    CATATCCTTG TTTGTTGTAC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453438.1
    CDS554..997
    Translation

    Target ORF information:

    RefSeq Version XM_024597670.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X6, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597670.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG AGCCAAAAGC TAAAGATGAT TCACAATTAT GTAGCTCTTT CAACTATTAT 
    ATTAATCGTC CATTTGTTGA TGAAGAAGAG CCTGATGCTT CTACTCCTTT CCAAGTTTTT 
    GAAGACATGC TTGAAGATAA TATCTCATCA AGGACTGGAA ACTCAGTTGT CCCAGACCTT 
    GGTGCAGAAG TAATGAGTGA TGTAAACTCT TCATCAGAAC CAGTGAAATT GGAAGACTTG 
    CAAAGAATCC TGAGTAATAT TGGTGCTGGA GGTGTGTTCT GCTTAGATAG TGCAAGTGAC 
    CATATCCTTG TTTGTTGTAC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0027s00390g ( XM_024597671.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024453439.1 Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X7, mRNA.
    Price & Availability↑
    CloneID OPa426600
    Clone ID Related Accession (Same CDS sequence) XM_024597671.1
    Accession Version XM_024597671.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 387bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 26S proteasome regulatory subunit RPN13 isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGG TGGCCCGCGT GATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024453439.1
    CDS554..940
    Translation

    Target ORF information:

    RefSeq Version XM_024597671.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 26S proteasome regulatory subunit RPN13 (LOC18111018), transcript variant X7, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024597671.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGCTGTGGA AGATGATCAT ATTATTTTTT TCTGAAGATG CTGTTTTTGA GAAGGTTAAT 
    CAAGCTTTGG GAAGAGTTTA CATCTTGAAA TTCAATACAG ATGATCGAAA GTTTTTCATT 
    TGGGTGCAGG TCAGGTTCAC TTTCTGCGTT TTTCACTCTC TTATGTGTAA CATTGACTCA 
    GCTGTTAGCT GCATGATTTT GGAAAATTGT GTAACATGTT TGCAGGAGCC AAAAGCTAAA 
    GATGATTCAC AATTATGTAG CTCTTTCAAC TATTATATTA ATCGTCCATT TGTTGATGAA 
    GAAGAGCCTG ATGCTTCTAC TCCTTTCCAA GTTTTTGAAG ACATGCTTGA AGATAATATC 
    TCATCAAGGG TGGCCCGCGT GATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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