ORF » Species Summary » Populus trichocarpa » LOC18109540 cDNA ORF clone

LOC18109540 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18109540 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18109540 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa38304 XM_006387762.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0542s00220g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa430007 XM_024601530.1
Latest version!		 Populus trichocarpa alcohol dehydrogenase (LOC18109540), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18109540 ( XM_006387762.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006387824.1 Populus trichocarpa hypothetical protein (POPTR_0542s00220g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa38304
    Clone ID Related Accession (Same CDS sequence) XM_006387762.1
    Accession Version XM_006387762.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1038bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006255784). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGAGGTTC GTTTGAAGAT CCTCTTCACT TCCCTCTGCC ATACTGATGT TTACTTCTGG 
    GAAGCCAAGG GGCAAACCCC ATTGTTTCCT CGCATATTCG GCCACGAAGC AGGAGGGATT 
    GTCGAAAGTG TTGGTGAGGG GGTGACAGAC CTGAAACCCG GTGACCATGT GCTTCCTGTC 
    TTCACAGGAG AGTGCAAGGA ATGCCGACAT TGCAAATCAG AGGAGAGTAA TATGTGTGAT 
    CTTCTGAGGA TCAACACTGA CAGAGGTGTG ATGTTGAATG ATGGAAAGTC TAGATTTTCA 
    ATTAGAGGGC AGCCCATTTA CCACTTTGTT GGTACCTCAA CCTTTAGTGA GTACACTGTG 
    GTTCATGTTG GCTGTCTTGC CAAGATCAAT CCGGCTGCTC CTCTTGACAA AGTTTGTATC 
    CTCAGCTGTG GAGTTTCAAC AGGTCTTGGT GCCACCTTGA ACGTTGCAAA ACCGAAGAAA 
    GGCTCGTCAG TAGCCATTTT TGGACTAGGA GCTGTAGGCC TTGCAGCTGC TGAAGGGGCT 
    CGAATTGCTG GTGCTTCAAG AATCATTGGT GTCGATTTGA ATTCCAATAG GTTCAATGAA 
    GCCAAGAAAT TCGGTGTCAC GGAGTTCGTA AACCCAAAAG ATTATAAGAA GCCTGTTCAA 
    GAGGTGATAG CTGAGATGAC CAACGGAGGA GTTGATCGAA GTGTCGAGTG CACTGGAAGT 
    ATCAATGCCA TGATTTCTGC CTTTGAATGT GTCCATGATG GATGGGGTGT TGCTGTACTT 
    GTTGGTGTGC CCAACAAAGA TGATTCTTTC AAAACCCATC CAATGAGTTT CCTGAATGAG 
    AAGACTCTCA AGGGTACCTT CTTTGGCAAC TACAAACCGC GCTCCGACCT TCCTTCAGTG 
    GTTGAAATGT ACATGAACAA GGAGCTTGAG CTGGAGAAAT TCATCACCCA TGAGGTCCCT 
    TTCTCAGAAA TCAACAAGGC TTTTGACTAC ATGCTTAGTG GAGCAAGTCT CAGGTGTATC 
    ATCCGCATGG AAGCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006387824.1
    CDS11..1048
    Translation

    Target ORF information:

    RefSeq Version XM_006387762.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0542s00220g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006387762.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGAGGTTC GTTTGAAGAT CCTCTTCACT TCCCTCTGCC ATACTGATGT TTACTTCTGG 
    GAAGCCAAGG GGCAAACCCC ATTGTTTCCT CGCATATTCG GCCACGAAGC AGGAGGGATT 
    GTCGAAAGTG TTGGTGAGGG GGTGACAGAC CTGAAACCCG GTGACCATGT GCTTCCTGTC 
    TTCACAGGAG AGTGCAAGGA ATGCCGACAT TGCAAATCAG AGGAGAGTAA TATGTGTGAT 
    CTTCTGAGGA TCAACACTGA CAGAGGTGTG ATGTTGAATG ATGGAAAGTC TAGATTTTCA 
    ATTAGAGGGC AGCCCATTTA CCACTTTGTT GGTACCTCAA CCTTTAGTGA GTACACTGTG 
    GTTCATGTTG GCTGTCTTGC CAAGATCAAT CCGGCTGCTC CTCTTGACAA AGTTTGTATC 
    CTCAGCTGTG GAGTTTCAAC AGGTCTTGGT GCCACCTTGA ACGTTGCAAA ACCGAAGAAA 
    GGCTCGTCAG TAGCCATTTT TGGACTAGGA GCTGTAGGCC TTGCAGCTGC TGAAGGGGCT 
    CGAATTGCTG GTGCTTCAAG AATCATTGGT GTCGATTTGA ATTCCAATAG GTTCAATGAA 
    GCCAAGAAAT TCGGTGTCAC GGAGTTCGTA AACCCAAAAG ATTATAAGAA GCCTGTTCAA 
    GAGGTGATAG CTGAGATGAC CAACGGAGGA GTTGATCGAA GTGTCGAGTG CACTGGAAGT 
    ATCAATGCCA TGATTTCTGC CTTTGAATGT GTCCATGATG GATGGGGTGT TGCTGTACTT 
    GTTGGTGTGC CCAACAAAGA TGATTCTTTC AAAACCCATC CAATGAGTTT CCTGAATGAG 
    AAGACTCTCA AGGGTACCTT CTTTGGCAAC TACAAACCGC GCTCCGACCT TCCTTCAGTG 
    GTTGAAATGT ACATGAACAA GGAGCTTGAG CTGGAGAAAT TCATCACCCA TGAGGTCCCT 
    TTCTCAGAAA TCAACAAGGC TTTTGACTAC ATGCTTAGTG GAGCAAGTCT CAGGTGTATC 
    ATCCGCATGG AAGCGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18109540 ( XM_024601530.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457298.1 Populus trichocarpa alcohol dehydrogenase (LOC18109540), mRNA.
    Price & Availability↑
    CloneID OPa430007
    Clone ID Related Accession (Same CDS sequence) XM_024601530.1
    Accession Version XM_024601530.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1143bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product alcohol dehydrogenase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCAAGCA CTGCTGGTCA AGTCATTCGT TGCAAAGCTG CTGTTGCATG GGAAGCTGGA 
    AAGCCATTAG TGATGGAGGA AGTGGAGGTG GCTCCACCAC AAGCTATGGA GGTTCGTTTG 
    AAGATCCTCT TCACTTCCCT CTGCCATACT GATGTTTACT TCTGGGAAGC CAAGGGGCAA 
    ACCCCATTGT TTCCTCGCAT ATTCGGCCAC GAAGCAGGAG GGATTGTCGA AAGTGTTGGT 
    GAGGGGGTGA CAGACCTGAA ACCCGGTGAC CATGTGCTTC CTGTCTTCAC AGGAGAGTGC 
    AAGGAATGCC GACATTGCAA ATCAGAGGAG AGTAATATGT GTGATCTTCT GAGGATCAAC 
    ACTGACAGAG GTGTGATGTT GAATGATGGA AAGTCTAGAT TTTCAATTAG AGGGCAGCCC 
    ATTTACCACT TTGTTGGTAC CTCAACCTTT AGTGAGTACA CTGTGGTTCA TGTTGGCTGT 
    CTTGCCAAGA TCAATCCGGC TGCTCCTCTT GACAAAGTTT GTATCCTCAG CTGTGGAGTT 
    TCAACAGGTC TTGGTGCCAC CTTGAACGTT GCAAAACCGA AGAAAGGCTC GTCAGTAGCC 
    ATTTTTGGAC TAGGAGCTGT AGGCCTTGCA GCTGCTGAAG GGGCTCGAAT TGCTGGTGCT 
    TCAAGAATCA TTGGTGTCGA TTTGAATTCC AATAGGTTCA ATGAAGCCAA GAAATTCGGT 
    GTCACGGAGT TCGTAAACCC AAAAGATTAT AAGAAGCCTG TTCAAGAGGT GATAGCTGAG 
    ATGACCAACG GAGGAGTTGA TCGAAGTGTC GAGTGCACTG GAAGTATCAA TGCCATGATT 
    TCTGCCTTTG AATGTGTCCA TGATGGATGG GGTGTTGCTG TACTTGTTGG TGTGCCCAAC 
    AAAGATGATT CTTTCAAAAC CCATCCAATG AGTTTCCTGA ATGAGAAGAC TCTCAAGGGT 
    ACCTTCTTTG GCAACTACAA ACCGCGCTCC GACCTTCCTT CAGTGGTTGA AATGTACATG 
    AACAAGGAGC TTGAGCTGGA GAAATTCATC ACCCATGAGG TCCCTTTCTC AGAAATCAAC 
    AAGGCTTTTG ACTACATGCT TAGTGGAGCA AGTCTCAGGT GTATCATCCG CATGGAAGCG 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457298.1
    CDS115..1257
    Translation

    Target ORF information:

    RefSeq Version XM_024601530.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa alcohol dehydrogenase (LOC18109540), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601530.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCAAGCA CTGCTGGTCA AGTCATTCGT TGCAAAGCTG CTGTTGCATG GGAAGCTGGA 
    AAGCCATTAG TGATGGAGGA AGTGGAGGTG GCTCCACCAC AAGCTATGGA GGTTCGTTTG 
    AAGATCCTCT TCACTTCCCT CTGCCATACT GATGTTTACT TCTGGGAAGC CAAGGGGCAA 
    ACCCCATTGT TTCCTCGCAT ATTCGGCCAC GAAGCAGGAG GGATTGTCGA AAGTGTTGGT 
    GAGGGGGTGA CAGACCTGAA ACCCGGTGAC CATGTGCTTC CTGTCTTCAC AGGAGAGTGC 
    AAGGAATGCC GACATTGCAA ATCAGAGGAG AGTAATATGT GTGATCTTCT GAGGATCAAC 
    ACTGACAGAG GTGTGATGTT GAATGATGGA AAGTCTAGAT TTTCAATTAG AGGGCAGCCC 
    ATTTACCACT TTGTTGGTAC CTCAACCTTT AGTGAGTACA CTGTGGTTCA TGTTGGCTGT 
    CTTGCCAAGA TCAATCCGGC TGCTCCTCTT GACAAAGTTT GTATCCTCAG CTGTGGAGTT 
    TCAACAGGTC TTGGTGCCAC CTTGAACGTT GCAAAACCGA AGAAAGGCTC GTCAGTAGCC 
    ATTTTTGGAC TAGGAGCTGT AGGCCTTGCA GCTGCTGAAG GGGCTCGAAT TGCTGGTGCT 
    TCAAGAATCA TTGGTGTCGA TTTGAATTCC AATAGGTTCA ATGAAGCCAA GAAATTCGGT 
    GTCACGGAGT TCGTAAACCC AAAAGATTAT AAGAAGCCTG TTCAAGAGGT GATAGCTGAG 
    ATGACCAACG GAGGAGTTGA TCGAAGTGTC GAGTGCACTG GAAGTATCAA TGCCATGATT 
    TCTGCCTTTG AATGTGTCCA TGATGGATGG GGTGTTGCTG TACTTGTTGG TGTGCCCAAC 
    AAAGATGATT CTTTCAAAAC CCATCCAATG AGTTTCCTGA ATGAGAAGAC TCTCAAGGGT 
    ACCTTCTTTG GCAACTACAA ACCGCGCTCC GACCTTCCTT CAGTGGTTGA AATGTACATG 
    AACAAGGAGC TTGAGCTGGA GAAATTCATC ACCCATGAGG TCCCTTTCTC AGAAATCAAC 
    AAGGCTTTTG ACTACATGCT TAGTGGAGCA AGTCTCAGGT GTATCATCCG CATGGAAGCG 
    TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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