ORF » Species Summary » Populus trichocarpa » LOC18106489 cDNA ORF clone

LOC18106489 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18106489 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18106489 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa34330 XM_006372354.1
Latest version!		 Populus trichocarpa glutamate decarboxylase 1 family protein (POPTR_0017s01430g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa419119 XM_006372354.2
Latest version!		 Populus trichocarpa glutamate decarboxylase (LOC18106489), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18106489 ( XM_006372354.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006372416.1 Populus trichocarpa glutamate decarboxylase 1 family protein (POPTR_0017s01430g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa34330
    Clone ID Related Accession (Same CDS sequence) XM_006372354.1
    Accession Version XM_006372354.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1491bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product glutamate decarboxylase 1 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008483). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTCTCT CCAAGACATC TTCAGAATCT GATGACTCCG TTCACTCAAC CTTCGCCTCG 
    AGATATGTCC GAGCTTCACT TCCGAGGTTC AAGATGCCAG AAAATTCGAT CCCAAAGGAG 
    GCAGCCTTTC AGATCATAAA CGACGAGCTC ATGTTGGATG GTAACCCTAG GCTTAACCTA 
    GCATCATTTG TGACCACATG GATGGAGCCT GAATGTGATA AGCTTATCAT GGCTTCTATC 
    AACAAAAACT ACGTGGACAT GGATGAATAC CCTGTCACCA CTGAGCTTCA GAACCGATGT 
    GTTAACATAA TAGCCCATCT CTTCAATGCA CCACTTGGAG ACTCAGAGAC AGCAATTGGA 
    GTCGGAACCG TAGGATCCTC CGAGGCTATA ATGTTGGCTG GTTTAGCATT CAAGAGAAGG 
    TGGCAGAACA AGATGAAAGC TGAGGGAAAG CCCTATGATA AGCCTAACAT TGTCACCGGA 
    GCCAATGTTC AGGTGTGTTG GGAGAAATTT GCAAGGTATT TTGAAGTGGA GTTGAAGGAG 
    GTGAAGCTTA GAGATGGTTA CTATGTGATG GATCCAGAAA AGGCTGTGAA AATGGTGGAT 
    GAGAACACAA TCTGTGTTGC AGCTATCCTT GGCTCCACCC TTAATGGAGA ATTTGAAGAT 
    GTTAAGCTCT TGAATGATCT CTTGGTGGAG AAGAACAAAG AAACTGGATG GGATACTCCG 
    ATCCATGTTG ATGCGGCCAG CGGTGGCTTC ATTGCTCCTT TTATTTACCC AGAACTTGAG 
    TGGGATTTCA GGTTGCCGTT GGTGAAGAGT ATCAATGTTA GCGGGCACAA ATATGGACTA 
    GTCTATGCTG GAATCGGTTG GGTCGTTTGG AGGAACAAAG AGGACTTGCC TGAAGAACTT 
    ATTTTTCATA TTAATTATCT TGGAGCTGAT CAACCCACCT TCACCCTCAA CTTCTCCAAA 
    GGATCTAGTC AAGTTATTGC TCAATATTAC CAACTCATTC GCTTGGGTTA TGAGGGATAC 
    AAAAATGTTA TGGAAAATTG TAGAGACAAC ATGATGGTGC TTAAACAAGG ACTGGAGAAC 
    ACAGGCAAGT TCAACATTGT CTCAAAAGAC AATGGGGTGC CATTAGTGGC CTTTTCATTG 
    AAGGACAATA GCAGCCATAA GGAATTTGAG GTATCCGAAA TGTTAAGGCG ATTTGGTTGG 
    ATTGTGCCTG CCTACACCAT GCCCCCTGAC GCTCAACATG TTACTGTCTT GCGTGTGGTG 
    ATCCGAGAAG ATTTCTCTAG GACACTCGCC GAACGTCTTG TTCTTGACAT TGAAAAGGTC 
    TTACATGAGC TTGAGACATT GCCATGCAGG ATCAGTACCA AGATTGCTTT GGCTAATGAG 
    GAGAAGGAAG CTGCGGCCAA TAAAGAGAAG AGGGATCTGG AGAAAACAAG AGAGATTACT 
    ACAGTTTGGA GGAAGTTCGT CATGCAAAGG AAGATGAATG GTGTGTGTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006372416.1
    CDS362..1852
    Translation

    Target ORF information:

    RefSeq Version XM_006372354.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa glutamate decarboxylase 1 family protein (POPTR_0017s01430g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006372354.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTCTCT CCAAGACATC TTCAGAATCT GATGACTCCG TTCACTCAAC CTTCGCCTCG 
    AGATATGTCC GAGCTTCACT TCCGAGGTTC AAGATGCCAG AAAATTCGAT CCCAAAGGAG 
    GCAGCCTTTC AGATCATAAA CGACGAGCTC ATGTTGGATG GTAACCCTAG GCTTAACCTA 
    GCATCATTTG TGACCACATG GATGGAGCCT GAATGTGATA AGCTTATCAT GGCTTCTATC 
    AACAAAAACT ACGTGGACAT GGATGAATAC CCTGTCACCA CTGAGCTTCA GAACCGATGT 
    GTTAACATAA TAGCCCATCT CTTCAATGCA CCACTTGGAG ACTCAGAGAC AGCAATTGGA 
    GTCGGAACCG TAGGATCCTC CGAGGCTATA ATGTTGGCTG GTTTAGCATT CAAGAGAAGG 
    TGGCAGAACA AGATGAAAGC TGAGGGAAAG CCCTATGATA AGCCTAACAT TGTCACCGGA 
    GCCAATGTTC AGGTGTGTTG GGAGAAATTT GCAAGGTATT TTGAAGTGGA GTTGAAGGAG 
    GTGAAGCTTA GAGATGGTTA CTATGTGATG GATCCAGAAA AGGCTGTGAA AATGGTGGAT 
    GAGAACACAA TCTGTGTTGC AGCTATCCTT GGCTCCACCC TTAATGGAGA ATTTGAAGAT 
    GTTAAGCTCT TGAATGATCT CTTGGTGGAG AAGAACAAAG AAACTGGATG GGATACTCCG 
    ATCCATGTTG ATGCGGCCAG CGGTGGCTTC ATTGCTCCTT TTATTTACCC AGAACTTGAG 
    TGGGATTTCA GGTTGCCGTT GGTGAAGAGT ATCAATGTTA GCGGGCACAA ATATGGACTA 
    GTCTATGCTG GAATCGGTTG GGTCGTTTGG AGGAACAAAG AGGACTTGCC TGAAGAACTT 
    ATTTTTCATA TTAATTATCT TGGAGCTGAT CAACCCACCT TCACCCTCAA CTTCTCCAAA 
    GGATCTAGTC AAGTTATTGC TCAATATTAC CAACTCATTC GCTTGGGTTA TGAGGGATAC 
    AAAAATGTTA TGGAAAATTG TAGAGACAAC ATGATGGTGC TTAAACAAGG ACTGGAGAAC 
    ACAGGCAAGT TCAACATTGT CTCAAAAGAC AATGGGGTGC CATTAGTGGC CTTTTCATTG 
    AAGGACAATA GCAGCCATAA GGAATTTGAG GTATCCGAAA TGTTAAGGCG ATTTGGTTGG 
    ATTGTGCCTG CCTACACCAT GCCCCCTGAC GCTCAACATG TTACTGTCTT GCGTGTGGTG 
    ATCCGAGAAG ATTTCTCTAG GACACTCGCC GAACGTCTTG TTCTTGACAT TGAAAAGGTC 
    TTACATGAGC TTGAGACATT GCCATGCAGG ATCAGTACCA AGATTGCTTT GGCTAATGAG 
    GAGAAGGAAG CTGCGGCCAA TAAAGAGAAG AGGGATCTGG AGAAAACAAG AGAGATTACT 
    ACAGTTTGGA GGAAGTTCGT CATGCAAAGG AAGATGAATG GTGTGTGTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18106489 ( XM_006372354.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006372416.1 Populus trichocarpa glutamate decarboxylase (LOC18106489), mRNA.
    Price & Availability↑
    CloneID OPa419119
    Clone ID Related Accession (Same CDS sequence) XM_006372354.2
    Accession Version XM_006372354.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1491bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glutamate decarboxylase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167901.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006372354.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTCTCT CCAAGACATC TTCAGAATCT GATGACTCCG TTCACTCAAC CTTCGCCTCG 
    AGATATGTCC GAGCTTCACT TCCGAGGTTC AAGATGCCAG AAAATTCGAT CCCAAAGGAG 
    GCAGCCTTTC AGATCATAAA CGACGAGCTC ATGTTGGATG GTAACCCTAG GCTTAACCTA 
    GCATCATTTG TGACCACATG GATGGAGCCT GAATGTGATA AGCTTATCAT GGCTTCTATC 
    AACAAAAACT ACGTGGACAT GGATGAATAC CCTGTCACCA CTGAGCTTCA GAACCGATGT 
    GTTAACATAA TAGCCCATCT CTTCAATGCA CCACTTGGAG ACTCAGAGAC AGCAATTGGA 
    GTCGGAACCG TAGGATCCTC CGAGGCTATA ATGTTGGCTG GTTTAGCATT CAAGAGAAGG 
    TGGCAGAACA AGATGAAAGC TGAGGGAAAG CCCTATGATA AGCCTAACAT TGTCACCGGA 
    GCCAATGTTC AGGTGTGTTG GGAGAAATTT GCAAGGTATT TTGAAGTGGA GTTGAAGGAG 
    GTGAAGCTTA GAGATGGTTA CTATGTGATG GATCCAGAAA AGGCTGTGAA AATGGTGGAT 
    GAGAACACAA TCTGTGTTGC AGCTATCCTT GGCTCCACCC TTAATGGAGA ATTTGAAGAT 
    GTTAAGCTCT TGAATGATCT CTTGGTGGAG AAGAACAAAG AAACTGGATG GGATACTCCG 
    ATCCATGTTG ATGCGGCCAG CGGTGGCTTC ATTGCTCCTT TTATTTACCC AGAACTTGAG 
    TGGGATTTCA GGTTGCCGTT GGTGAAGAGT ATCAATGTTA GCGGGCACAA ATATGGACTA 
    GTCTATGCTG GAATCGGTTG GGTCGTTTGG AGGAACAAAG AGGACTTGCC TGAAGAACTT 
    ATTTTTCATA TTAATTATCT TGGAGCTGAT CAACCCACCT TCACCCTCAA CTTCTCCAAA 
    GGATCTAGTC AAGTTATTGC TCAATATTAC CAACTCATTC GCTTGGGTTA TGAGGGATAC 
    AAAAATGTTA TGGAAAATTG CAGAGATAAC ATGATGGTGC TTAAACAAGG ACTGGAGAAC 
    ACAGGCAAGT TCAACATTGT CTCAAAAGAC AATGGGGTGC CATTAGTGGC CTTTTCATTG 
    AAGGACAATA GCAGCCATAA GGAATTTGAG GTATCCGAAA TGTTAAGGCG ATTTGGTTGG 
    ATTGTGCCTG CCTACACCAT GCCCCCTGAC GCTCAACATG TTACTGTCTT GCGTGTGGTG 
    ATCCGAGAAG ATTTCTCTAG GACACTCGCC GAACGTCTTG TTCTTGACAT TGAAAAGGTC 
    TTACATGAGC TTGAGACATT GCCATGCAGG ATCAGTACCA AGATTGCTTT GGCTAATGAG 
    GAGAAGGAAG CTGCGGCCAA TAAAGAGAAG AGGGATCTGG AGAAAACAAG AGAGATTACT 
    ACAGTTTGGA GGAAGTTCGT CATGCAAAGG AAGATGAATG GTGTGTGTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006372416.1
    CDS88..1578
    Translation

    Target ORF information:

    RefSeq Version XM_006372354.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glutamate decarboxylase (LOC18106489), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006372354.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTCTCT CCAAGACATC TTCAGAATCT GATGACTCCG TTCACTCAAC CTTCGCCTCG 
    AGATATGTCC GAGCTTCACT TCCGAGGTTC AAGATGCCAG AAAATTCGAT CCCAAAGGAG 
    GCAGCCTTTC AGATCATAAA CGACGAGCTC ATGTTGGATG GTAACCCTAG GCTTAACCTA 
    GCATCATTTG TGACCACATG GATGGAGCCT GAATGTGATA AGCTTATCAT GGCTTCTATC 
    AACAAAAACT ACGTGGACAT GGATGAATAC CCTGTCACCA CTGAGCTTCA GAACCGATGT 
    GTTAACATAA TAGCCCATCT CTTCAATGCA CCACTTGGAG ACTCAGAGAC AGCAATTGGA 
    GTCGGAACCG TAGGATCCTC CGAGGCTATA ATGTTGGCTG GTTTAGCATT CAAGAGAAGG 
    TGGCAGAACA AGATGAAAGC TGAGGGAAAG CCCTATGATA AGCCTAACAT TGTCACCGGA 
    GCCAATGTTC AGGTGTGTTG GGAGAAATTT GCAAGGTATT TTGAAGTGGA GTTGAAGGAG 
    GTGAAGCTTA GAGATGGTTA CTATGTGATG GATCCAGAAA AGGCTGTGAA AATGGTGGAT 
    GAGAACACAA TCTGTGTTGC AGCTATCCTT GGCTCCACCC TTAATGGAGA ATTTGAAGAT 
    GTTAAGCTCT TGAATGATCT CTTGGTGGAG AAGAACAAAG AAACTGGATG GGATACTCCG 
    ATCCATGTTG ATGCGGCCAG CGGTGGCTTC ATTGCTCCTT TTATTTACCC AGAACTTGAG 
    TGGGATTTCA GGTTGCCGTT GGTGAAGAGT ATCAATGTTA GCGGGCACAA ATATGGACTA 
    GTCTATGCTG GAATCGGTTG GGTCGTTTGG AGGAACAAAG AGGACTTGCC TGAAGAACTT 
    ATTTTTCATA TTAATTATCT TGGAGCTGAT CAACCCACCT TCACCCTCAA CTTCTCCAAA 
    GGATCTAGTC AAGTTATTGC TCAATATTAC CAACTCATTC GCTTGGGTTA TGAGGGATAC 
    AAAAATGTTA TGGAAAATTG CAGAGATAAC ATGATGGTGC TTAAACAAGG ACTGGAGAAC 
    ACAGGCAAGT TCAACATTGT CTCAAAAGAC AATGGGGTGC CATTAGTGGC CTTTTCATTG 
    AAGGACAATA GCAGCCATAA GGAATTTGAG GTATCCGAAA TGTTAAGGCG ATTTGGTTGG 
    ATTGTGCCTG CCTACACCAT GCCCCCTGAC GCTCAACATG TTACTGTCTT GCGTGTGGTG 
    ATCCGAGAAG ATTTCTCTAG GACACTCGCC GAACGTCTTG TTCTTGACAT TGAAAAGGTC 
    TTACATGAGC TTGAGACATT GCCATGCAGG ATCAGTACCA AGATTGCTTT GGCTAATGAG 
    GAGAAGGAAG CTGCGGCCAA TAAAGAGAAG AGGGATCTGG AGAAAACAAG AGAGATTACT 
    ACAGTTTGGA GGAAGTTCGT CATGCAAAGG AAGATGAATG GTGTGTGTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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