ORF » Species Summary » Populus trichocarpa » POPTR_0013s13400g cDNA ORF clone

POPTR_0013s13400g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0013s13400g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0013s13400g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa29014 XM_006376420.2
Latest version!		 Populus trichocarpa mannan endo-1,4-beta-mannosidase 2 (LOC18104624), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa29014 XM_006376420.1 Populus trichocarpa glycosyl hydrolase family 5 family protein (POPTR_0013s13400g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0013s13400g ( XM_006376420.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006376482.1 Populus trichocarpa mannan endo-1,4-beta-mannosidase 2 (LOC18104624), mRNA.
    Price & Availability↑
    CloneID OPa29014
    Clone ID Related Accession (Same CDS sequence) XM_006376420.2 , XM_006376420.1
    Accession Version XM_006376420.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1308bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product mannan endo-1,4-beta-mannosidase 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006376420.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCAGAAAA TGGTAGCAGG AAATGGGCTA CTTTACCCGA TTTTAGGTTT TGCATCATGT 
    GTGGCTTTCA TTTACATGTC TTTTGGTGGC TTTATACTCA CCAACCATCA AGAACACAGG 
    GAGCTAAGTT TTGTGGAGAG AAATGGGACT CAGTTTATGG TGGATGGCAG GGCTTTTTAC 
    ATTAACGGAT GGAATTCTTA TTGGTTGATG GATCATTCTG TCGATGAAGA TAGGAAACCT 
    AGAGTTGGTG CAATGCTGGA AGCTGGTGCC AAGATGGGTC TCACTGTTTG CAGAACTTGG 
    GCATTCAATG ATGGTGGCTA CAACGCACTC CAGGTCTCCC CTGGTAGATT CGATGAGCGG 
    GTCTTAAGGG CTTTGGATTA TGTTATTGCA GAAGCCAGAC AACATGGAGT CAGACTACTA 
    CTTAGTTTAG TCAACAACTT AAAGGCATAT GGTGGAAAGA CTCAGTATGT GAATTGGGCA 
    TGGGAGGAAG GCATTGGTTT GAGCTCGTCA AATGATTCTT TCTTCTTTGA TCCATCCATC 
    AAAAGATATT TCAAGCATTA TGTAAAGACT TTGTTGACCA GGAAAAACAC CATCACAGGG 
    ATTGAATATA GGAATGATCC TACCATATTT GCATGGGAGT TGATGAATGA GCCCCGTTGC 
    ATGTCTGATC CTTCAGGTGA CACTCTTCAA GATTGGATAG AAGAAATGTC AGCTTTCGTG 
    AAAACAATTG ACACGAACCA TCTTCTAACA GTGGGCCTGG AAGGTTTTTA TGGTCCTAAA 
    AATCCCAAAA GGTTAACTGT GAACCCAGAA TCTTGGGCAT CAAGCCTTGG ATCTGATTTT 
    GTTCGCAACT CCAAAGCGCC TGCCATTGAC TTTGCCTCTG TTCATATATA CCCTGATCAT 
    TGGTTTCCTC ATCAAGAATT TGAAGATAAA CTGAAATACG TCTCCAAGTG GATGCTTTCA 
    CACATTGAAG ATGGTCACTA TGAGCTAAAT AAACCTGTCT TCTTCACTGA ATTTGGTTTG 
    TCCAACCTGA ACAAGGACTT CCAGCCATCT CAACGGGATC GATTTTACAA AACCATTTTT 
    GACATCATAT ATAAATCTTC AAAGAGAAAG CGGGCTGGGG CAGGTGCTTT GATCTGGCAG 
    TTGTTTGTTG AAGGAATGGA CGACTTTAAT GATGATTTTG GGATTGTTCC ATGGGAAAGG 
    GAATCAACAA ACAGAATACT GACTGATCAA TCATGTAGAT TGGCCAGAAT CCATGGAATT 
    TCTCCACAAA ATAAATATTT GAAAGAATTG TGTTTGCAGA GGCAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006376482.1
    CDS957..2264
    Translation

    Target ORF information:

    RefSeq Version XM_006376420.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa mannan endo-1,4-beta-mannosidase 2 (LOC18104624), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006376420.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCAGAAAA TGGTAGCAGG AAATGGGCTA CTTTACCCGA TTTTAGGTTT TGCATCATGT 
    GTGGCTTTCA TTTACATGTC TTTTGGTGGC TTTATACTCA CCAACCATCA AGAACACAGG 
    GAGCTAAGTT TTGTGGAGAG AAATGGGACT CAGTTTATGG TGGATGGCAG GGCTTTTTAC 
    ATTAACGGAT GGAATTCTTA TTGGTTGATG GATCATTCTG TCGATGAAGA TAGGAAACCT 
    AGAGTTGGTG CAATGCTGGA AGCTGGTGCC AAGATGGGTC TCACTGTTTG CAGAACTTGG 
    GCATTCAATG ATGGTGGCTA CAACGCACTC CAGGTCTCCC CTGGTAGATT CGATGAGCGG 
    GTCTTAAGGG CTTTGGATTA TGTTATTGCA GAAGCCAGAC AACATGGAGT CAGACTACTA 
    CTTAGTTTAG TCAACAACTT AAAGGCATAT GGTGGAAAGA CTCAGTATGT GAATTGGGCA 
    TGGGAGGAAG GCATTGGTTT GAGCTCGTCA AATGATTCTT TCTTCTTTGA TCCATCCATC 
    AAAAGATATT TCAAGCATTA TGTAAAGACT TTGTTGACCA GGAAAAACAC CATCACAGGG 
    ATTGAATATA GGAATGATCC TACCATATTT GCATGGGAGT TGATGAATGA GCCCCGTTGC 
    ATGTCTGATC CTTCAGGTGA CACTCTTCAA GATTGGATAG AAGAAATGTC AGCTTTCGTG 
    AAAACAATTG ACACGAACCA TCTTCTAACA GTGGGCCTGG AAGGTTTTTA TGGTCCTAAA 
    AATCCCAAAA GGTTAACTGT GAACCCAGAA TCTTGGGCAT CAAGCCTTGG ATCTGATTTT 
    GTTCGCAACT CCAAAGCGCC TGCCATTGAC TTTGCCTCTG TTCATATATA CCCTGATCAT 
    TGGTTTCCTC ATCAAGAATT TGAAGATAAA CTGAAATACG TCTCCAAGTG GATGCTTTCA 
    CACATTGAAG ATGGTCACTA TGAGCTAAAT AAACCTGTCT TCTTCACTGA ATTTGGTTTG 
    TCCAACCTGA ACAAGGACTT CCAGCCATCT CAACGGGATC GATTTTACAA AACCATTTTT 
    GACATCATAT ATAAATCTTC AAAGAGAAAG CGGGCTGGGG CAGGTGCTTT GATCTGGCAG 
    TTGTTTGTTG AAGGAATGGA CGACTTTAAT GATGATTTTG GGATTGTTCC ATGGGAAAGG 
    GAATCAACAA ACAGAATACT GACTGATCAA TCATGTAGAT TGGCCAGAAT CCATGGAATT 
    TCTCCACAAA ATAAATATTT GAAAGAATTG TGTTTGCAGA GGCAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0013s13400g ( XM_006376420.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006376482.1 Populus trichocarpa glycosyl hydrolase family 5 family protein (POPTR_0013s13400g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa29014
    Clone ID Related Accession (Same CDS sequence) XM_006376420.2 , XM_006376420.1
    Accession Version XM_006376420.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1308bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product glycosyl hydrolase family 5 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCAGAAAA TGGTAGCAGG AAATGGGCTA CTTTACCCGA TTTTAGGTTT TGCATCATGT 
    GTGGCTTTCA TTTACATGTC TTTTGGTGGC TTTATACTCA CCAACCATCA AGAACACAGG 
    GAGCTAAGTT TTGTGGAGAG AAATGGGACT CAGTTTATGG TGGATGGCAG GGCTTTTTAC 
    ATTAACGGAT GGAATTCTTA TTGGTTGATG GATCATTCTG TCGATGAAGA TAGGAAACCT 
    AGAGTTGGTG CAATGCTGGA AGCTGGTGCC AAGATGGGTC TCACTGTTTG CAGAACTTGG 
    GCATTCAATG ATGGTGGCTA CAACGCACTC CAGGTCTCCC CTGGTAGATT CGATGAGCGG 
    GTCTTAAGGG CTTTGGATTA TGTTATTGCA GAAGCCAGAC AACATGGAGT CAGACTACTA 
    CTTAGTTTAG TCAACAACTT AAAGGCATAT GGTGGAAAGA CTCAGTATGT GAATTGGGCA 
    TGGGAGGAAG GCATTGGTTT GAGCTCGTCA AATGATTCTT TCTTCTTTGA TCCATCCATC 
    AAAAGATATT TCAAGCATTA TGTAAAGACT TTGTTGACCA GGAAAAACAC CATCACAGGG 
    ATTGAATATA GGAATGATCC TACCATATTT GCATGGGAGT TGATGAATGA GCCCCGTTGC 
    ATGTCTGATC CTTCAGGTGA CACTCTTCAA GATTGGATAG AAGAAATGTC AGCTTTCGTG 
    AAAACAATTG ACACGAACCA TCTTCTAACA GTGGGCCTGG AAGGTTTTTA TGGTCCTAAA 
    AATCCCAAAA GGTTAACTGT GAACCCAGAA TCTTGGGCAT CAAGCCTTGG ATCTGATTTT 
    GTTCGCAACT CCAAAGCGCC TGCCATTGAC TTTGCCTCTG TTCATATATA CCCTGATCAT 
    TGGTTTCCTC ATCAAGAATT TGAAGATAAA CTGAAATACG TCTCCAAGTG GATGCTTTCA 
    CACATTGAAG ATGGTCACTA TGAGCTAAAT AAACCTGTCT TCTTCACTGA ATTTGGTTTG 
    TCCAACCTGA ACAAGGACTT CCAGCCATCT CAACGGGATC GATTTTACAA AACCATTTTT 
    GACATCATAT ATAAATCTTC AAAGAGAAAG CGGGCTGGGG CAGGTGCTTT GATCTGGCAG 
    TTGTTTGTTG AAGGAATGGA CGACTTTAAT GATGATTTTG GGATTGTTCC ATGGGAAAGG 
    GAATCAACAA ACAGAATACT GACTGATCAA TCATGTAGAT TGGCCAGAAT CCATGGAATT 
    TCTCCACAAA ATAAATATTT GAAAGAATTG TGTTTGCAGA GGCAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006376482.1
    CDS277..1584
    Translation

    Target ORF information:

    RefSeq Version XM_006376420.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa glycosyl hydrolase family 5 family protein (POPTR_0013s13400g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006376420.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGCAGAAAA TGGTAGCAGG AAATGGGCTA CTTTACCCGA TTTTAGGTTT TGCATCATGT 
    GTGGCTTTCA TTTACATGTC TTTTGGTGGC TTTATACTCA CCAACCATCA AGAACACAGG 
    GAGCTAAGTT TTGTGGAGAG AAATGGGACT CAGTTTATGG TGGATGGCAG GGCTTTTTAC 
    ATTAACGGAT GGAATTCTTA TTGGTTGATG GATCATTCTG TCGATGAAGA TAGGAAACCT 
    AGAGTTGGTG CAATGCTGGA AGCTGGTGCC AAGATGGGTC TCACTGTTTG CAGAACTTGG 
    GCATTCAATG ATGGTGGCTA CAACGCACTC CAGGTCTCCC CTGGTAGATT CGATGAGCGG 
    GTCTTAAGGG CTTTGGATTA TGTTATTGCA GAAGCCAGAC AACATGGAGT CAGACTACTA 
    CTTAGTTTAG TCAACAACTT AAAGGCATAT GGTGGAAAGA CTCAGTATGT GAATTGGGCA 
    TGGGAGGAAG GCATTGGTTT GAGCTCGTCA AATGATTCTT TCTTCTTTGA TCCATCCATC 
    AAAAGATATT TCAAGCATTA TGTAAAGACT TTGTTGACCA GGAAAAACAC CATCACAGGG 
    ATTGAATATA GGAATGATCC TACCATATTT GCATGGGAGT TGATGAATGA GCCCCGTTGC 
    ATGTCTGATC CTTCAGGTGA CACTCTTCAA GATTGGATAG AAGAAATGTC AGCTTTCGTG 
    AAAACAATTG ACACGAACCA TCTTCTAACA GTGGGCCTGG AAGGTTTTTA TGGTCCTAAA 
    AATCCCAAAA GGTTAACTGT GAACCCAGAA TCTTGGGCAT CAAGCCTTGG ATCTGATTTT 
    GTTCGCAACT CCAAAGCGCC TGCCATTGAC TTTGCCTCTG TTCATATATA CCCTGATCAT 
    TGGTTTCCTC ATCAAGAATT TGAAGATAAA CTGAAATACG TCTCCAAGTG GATGCTTTCA 
    CACATTGAAG ATGGTCACTA TGAGCTAAAT AAACCTGTCT TCTTCACTGA ATTTGGTTTG 
    TCCAACCTGA ACAAGGACTT CCAGCCATCT CAACGGGATC GATTTTACAA AACCATTTTT 
    GACATCATAT ATAAATCTTC AAAGAGAAAG CGGGCTGGGG CAGGTGCTTT GATCTGGCAG 
    TTGTTTGTTG AAGGAATGGA CGACTTTAAT GATGATTTTG GGATTGTTCC ATGGGAAAGG 
    GAATCAACAA ACAGAATACT GACTGATCAA TCATGTAGAT TGGCCAGAAT CCATGGAATT 
    TCTCCACAAA ATAAATATTT GAAAGAATTG TGTTTGCAGA GGCAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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