ORF » Species Summary » Populus trichocarpa » LOC18100948 cDNA ORF clone

LOC18100948 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18100948 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18100948 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa18083 XM_006380365.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0007s05620g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa433102 XM_024605091.1
Latest version!		 Populus trichocarpa succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial (LOC18100948), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18100948 ( XM_006380365.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006380427.1 Populus trichocarpa hypothetical protein (POPTR_0007s05620g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa18083
    Clone ID Related Accession (Same CDS sequence) XM_006380365.1
    Accession Version XM_006380365.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 393bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008473). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    ATGATTCAAC TCTGGTCATG CAGGGAAGGG ATATGTGGAT CATGTGCCAT GAATGTTGAT 
    GGGACTAACA CTGTGGCCTT CCTTAAGCCC GTTGATGCAG CCACCGGCGA GGTGATCAGA 
    GATCTTGTTG TCGATCTCAC CATCTTCTAC CTGCAGTACA ATGCTTCATG CCTGTCGTAT 
    TGGTGGAACC CCGAGGAATT CCTTGGACCT TCTCCTTTGC TCCAAGCTTA TCGATGGATC 
    TGTGACAGTA GGAATGAATT TGCGGATGAA AGGTTGCAAG CATTAACGGA AGATCACATG 
    AGATTATACA GATGCAGAAC TATGAAGAAT TGCACTGCTA TCTGCCCCCA AAAGCCTAAA 
    TCCTGCCGAT GCTATTCACA AGATGAAGAT TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006380427.1
    CDS1..393
    Translation

    Target ORF information:

    RefSeq Version XM_006380365.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0007s05620g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006380365.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGATTCAAC TCTGGTCATG CAGGGAAGGG ATATGTGGAT CATGTGCCAT GAATGTTGAT 
    GGGACTAACA CTGTGGCCTT CCTTAAGCCC GTTGATGCAG CCACCGGCGA GGTGATCAGA 
    GATCTTGTTG TCGATCTCAC CATCTTCTAC CTGCAGTACA ATGCTTCATG CCTGTCGTAT 
    TGGTGGAACC CCGAGGAATT CCTTGGACCT TCTCCTTTGC TCCAAGCTTA TCGATGGATC 
    TGTGACAGTA GGAATGAATT TGCGGATGAA AGGTTGCAAG CATTAACGGA AGATCACATG 
    AGATTATACA GATGCAGAAC TATGAAGAAT TGCACTGCTA TCTGCCCCCA AAAGCCTAAA 
    TCCTGCCGAT GCTATTCACA AGATGAAGAT TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18100948 ( XM_024605091.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024460859.1 Populus trichocarpa succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial (LOC18100948), mRNA.
    Price & Availability↑
    CloneID OPa433102
    Clone ID Related Accession (Same CDS sequence) XM_024605091.1
    Accession Version XM_024605091.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 774bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 9% of CDS bases frameshifts :: corrected 2 indels ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCGAAGA GCAGCTGCTT ACGCAATGGC TACAGCAAGG TAGCCCGTGT GCTCGGCAAG 
    GGAGACCCCA AGAAGCAAGA CCTTCCAATG GTAGAAGACC ACCCTGCGGG ACAACAACAT 
    GCACAAGAAA CCGTGGAGAC GTATGGTACA GTAACAAATA ACATAAAAAG GCTAATCAAG 
    GAGTTCAGAA TTNNTCCCTA CCAGAAACCC TATCTCCATT CTTACTTCAT AGACCTATCC 
    AAATGCGGTG CAGTTGAAAA TGATTATCGT TATGTTGGTG TGTATAAGGT GTTGGATGTG 
    TTACAGAAGA TAAAAGCAGA GGATGATTCA ACTCTGGTCA TGCAGGGAAG GGATATGTGG 
    AATTGTGGAT CATGTGCCAT GAATGTTGAT GGGACTAACA CTGTGGCCTT CCTTAAGCCC 
    GTTGATGCAG CCACCGGCGA GACAACAAAG GCACCTGAGT GTATCCTTTG TGCTTGTTGC 
    AGTGCTTCAT GCCTGTCGTA TTGGTGGAAC CCCGAGGAAT TCCTTGGACC TGCTCCTTTG 
    CTCCAAGCTT ATCGATGGAT CTGTGACAGT AGGAATGAAT TTGCGGATGA AAGGTTGCAA 
    GCATTAACGG AAGATCACAT GAGATTATAC AGATGCAGAA CTATGAAGAA TTGCACTGCT 
    ATCTGCCCCA AAAGCCTAAA TCCTGCCGAT GCTATTCACA AGATGAAGAT TAGGCATTTA 
    CTTTCTGTGC GAACGGAGGA AGTGGAAACC GATAACAGTG TCAAAGTAGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024460859.1
    CDS1..774
    Translation

    Target ORF information:

    RefSeq Version XM_024605091.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial (LOC18100948), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024605091.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGTCGAAGA GCAGCTGCTT ACGCAATGGC TACAGCAAGG TAGCCCGTGT GCTCGGCAAG 
    GGAGACCCCA AGAAGCAAGA CCTTCCAATG GTAGAAGACC ACCCTGCGGG ACAACAACAT 
    GCACAAGAAA CCGTGGAGAC GTATGGTACA GTAACAAATA ACATAAAAAG GCTAATCAAG 
    GAGTTCAGAA TTNNTCCCTA CCAGAAACCC TATCTCCATT CTTACTTCAT AGACCTATCC 
    AAATGCGGTG CAGTTGAAAA TGATTATCGT TATGTTGGTG TGTATAAGGT GTTGGATGTG 
    TTACAGAAGA TAAAAGCAGA GGATGATTCA ACTCTGGTCA TGCAGGGAAG GGATATGTGG 
    AATTGTGGAT CATGTGCCAT GAATGTTGAT GGGACTAACA CTGTGGCCTT CCTTAAGCCC 
    GTTGATGCAG CCACCGGCGA GACAACAAAG GCACCTGAGT GTATCCTTTG TGCTTGTTGC 
    AGTGCTTCAT GCCTGTCGTA TTGGTGGAAC CCCGAGGAAT TCCTTGGACC TGCTCCTTTG 
    CTCCAAGCTT ATCGATGGAT CTGTGACAGT AGGAATGAAT TTGCGGATGA AAGGTTGCAA 
    GCATTAACGG AAGATCACAT GAGATTATAC AGATGCAGAA CTATGAAGAA TTGCACTGCT 
    ATCTGCCCCA AAAGCCTAAA TCCTGCCGAT GCTATTCACA AGATGAAGAT TAGGCATTTA 
    CTTTCTGTGC GAACGGAGGA AGTGGAAACC GATAACAGTG TCAAAGTAGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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