| Gene Symbol | CDX2 |
| Entrez Gene ID | 1045 |
| Full Name | caudal type homeobox 2 |
| Synonyms | CDX-3,CDX2/AS,CDX3 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Homo sapiens(human) |
| Genome | |
| Summary | This gene is a member of the caudal-related homeobox transcription factor gene family. The encoded protein is a major regulator of intestine-specific genes involved in cell growth an differentiation. This protein also plays a role in early embryonic development of the intestinal tract. Aberrant expression of this gene is associated with intestinal inflammation and tumorigenesis. [provided by RefSeq, Jan 2012]. |
| Disorder MIM: |
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CDX2 cDNA ORF clone, Homo sapiens(human)
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Gene
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Clones
gRNAs
The following CDX2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CDX2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID OHu108151 Clone ID Related Accession (Same CDS sequence) NM_001265.6 Accession Version NM_001265.6 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 942bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1577721600000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform 1 Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AL591024.14. On May 17, 2019 this sequence version replaced NM_001265.5. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR6380201.133355.11, BC014461.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMN03267769 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000381020.8/ ENSP00000370408.6 RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end.
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGCCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001256.4 CDS 310..1251 Translation 
Target ORF information:
RefSeq Version NM_001265.6 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant 1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_001265.6
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGCCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56806 Clone ID Related Accession (Same CDS sequence) NM_001354700.1 , XM_011534877.2 Accession Version NM_001354700.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 822bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1577548800000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform 2 Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AL591024.14, KJ081251.1, BC014461.1 and AK000205.1. On Aug 19, 2017 this sequence version replaced XM_011534877.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: KJ081251.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMN03267769 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGTTAAAA TCTGGTTTCA GAACCGCAGA GCAAAGGAGA
GGAAAATCAA CAAGAAGAAG TTGCAGCAGC AACAGCAGCA GCAGCCACCA CAGCCGCCTC
CGCCGCCACC ACAGCCTCCC CAGCCTCAGC CAGGTCCTCT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001341629.1 CDS 363..1184 Translation
Target ORF information:
RefSeq Version NM_001354700.1 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant 2, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK NM_001354700.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGTTAAAA TCTGGTTTCA GAACCGCAGA GCAAAGGAGA
GGAAAATCAA CAAGAAGAAG TTGCAGCAGC AACAGCAGCA GCAGCCACCA CAGCCGCCTC
CGCCGCCACC ACAGCCTCCC CAGCCTCAGC CAGGTCCTCT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56804 Clone ID Related Accession (Same CDS sequence) XM_011534875.2 Accession Version XM_011534875.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 966bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1575475200000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform X1 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534875.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GCCCTCACTT CTCCTTCCTC CACAGTGAAA ACCAGGACGA AAGACAAATA TCGAGTGGTG
TACACGGACC ACCAGCGGCT GGAGCTGGAG AAGGAGTTTC ACTACAGTCG CTACATCACC
ATCCGGAGGA AAGCCGAGCT AGCCGCCACG CTGGGGCTCT CTGAGAGGCA GGTTAAAATC
TGGTTTCAGA ACCGCAGAGC AAAGGAGAGG AAAATCAACA AGAAGAAGTT GCAGCAGCAA
CAGCAGCAGC AGCCACCACA GCCGCCTCCG CCGCCACCAC AGCCTCCCCA GCCTCAGCCA
GGTCCTCTGA GAAGTGTCCC AGAGCCCTTG AGTCCGGTGT CTTCCCTGCA AGCCTCAGTG
CCTGGCTCTG TCCCTGGGGT TCTGGGGCCA ACTGGGGGGG TGCTAAACCC CACCGTCACC
CAGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_011533177.1 CDS 332..1297 Translation
Target ORF information:
RefSeq Version XM_011534875.2 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant X1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_011534875.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GCCCTCACTT CTCCTTCCTC CACAGTGAAA ACCAGGACGA AAGACAAATA TCGAGTGGTG
TACACGGACC ACCAGCGGCT GGAGCTGGAG AAGGAGTTTC ACTACAGTCG CTACATCACC
ATCCGGAGGA AAGCCGAGCT AGCCGCCACG CTGGGGCTCT CTGAGAGGCA GGTTAAAATC
TGGTTTCAGA ACCGCAGAGC AAAGGAGAGG AAAATCAACA AGAAGAAGTT GCAGCAGCAA
CAGCAGCAGC AGCCACCACA GCCGCCTCCG CCGCCACCAC AGCCTCCCCA GCCTCAGCCA
GGTCCTCTGA GAAGTGTCCC AGAGCCCTTG AGTCCGGTGT CTTCCCTGCA AGCCTCAGTG
CCTGGCTCTG TCCCTGGGGT TCTGGGGCCA ACTGGGGGGG TGCTAAACCC CACCGTCACC
CAGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56805 Clone ID Related Accession (Same CDS sequence) XM_011534876.2 Accession Version XM_011534876.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 846bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1575475200000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform X2 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534876.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GCCCTCACTT CTCCTTCCTC CACAGTGAAA ACCAGGACGA AAGACAAATA TCGAGTGGTG
TACACGGACC ACCAGCGGCT GGAGCTGGAG AAGGAGTTTC ACTACAGTCG CTACATCACC
ATCCGGAGGA AAGCCGAGCT AGCCGCCACG CTGGGGCTCT CTGAGAGGTT AAAATCTGGT
TTCAGAACCG CAGAGCAAAG GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC
AGCAGCAGCC ACCACAGCCG CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC
CTCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_011533178.1 CDS 332..1177 Translation
Target ORF information:
RefSeq Version XM_011534876.2 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant X2, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_011534876.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GCCCTCACTT CTCCTTCCTC CACAGTGAAA ACCAGGACGA AAGACAAATA TCGAGTGGTG
TACACGGACC ACCAGCGGCT GGAGCTGGAG AAGGAGTTTC ACTACAGTCG CTACATCACC
ATCCGGAGGA AAGCCGAGCT AGCCGCCACG CTGGGGCTCT CTGAGAGGTT AAAATCTGGT
TTCAGAACCG CAGAGCAAAG GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC
AGCAGCAGCC ACCACAGCCG CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC
CTCTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56806 Clone ID Related Accession (Same CDS sequence) NM_001354700.1 , XM_011534877.2 Accession Version XM_011534877.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 822bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1465056000000 Organism Homo sapiens(Human) Product homeobox protein CDX-2 isoform X3 Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534877.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Homo sapiens Annotation Release 108 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGTTAAAA TCTGGTTTCA GAACCGCAGA GCAAAGGAGA
GGAAAATCAA CAAGAAGAAG TTGCAGCAGC AACAGCAGCA GCAGCCACCA CAGCCGCCTC
CGCCGCCACC ACAGCCTCCC CAGCCTCAGC CAGGTCCTCT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_011533179.1 CDS 332..1153 Translation
Target ORF information:
RefSeq Version XM_011534877.2 Organism Homo sapiens(Human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant X3, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_011534877.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGTTAAAA TCTGGTTTCA GAACCGCAGA GCAAAGGAGA
GGAAAATCAA CAAGAAGAAG TTGCAGCAGC AACAGCAGCA GCAGCCACCA CAGCCGCCTC
CGCCGCCACC ACAGCCTCCC CAGCCTCAGC CAGGTCCTCT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56807 Clone ID Related Accession (Same CDS sequence) XM_011534878.2 Accession Version XM_011534878.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 615bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1575475200000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform X3 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534878.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601ATGCCCCAAT TGGGCAGGCA CGCTGGTTAT GGGCACTTTG CAGAAGTTTA TAGCCAATTA
CAACTGTATA AATCAAAGCG CCCTTTGGGG GCTGTCTCTG GGCATCGGTT TCTGCGTCAC
TGTGCACATG CTAGGGAGAG TCCTGGTGGG AATGCCGCCG ACCGGGGAGA AGGCCACAGA
TCAGCCTCGG CCCTCACTTC TCCTTCCTCC ACAGTGAAAA CCAGGACGAA AGACAAATAT
CGAGTGGTGT ACACGGACCA CCAGCGGCTG GAGCTGGAGA AGGAGTTTCA CTACAGTCGC
TACATCACCA TCCGGAGGAA AGCCGAGCTA GCCGCCACGC TGGGGCTCTC TGAGAGGCAG
GTTAAAATCT GGTTTCAGAA CCGCAGAGCA AAGGAGAGGA AAATCAACAA GAAGAAGTTG
CAGCAGCAAC AGCAGCAGCA GCCACCACAG CCGCCTCCGC CGCCACCACA GCCTCCCCAG
CCTCAGCCAG GTCCTCTGAG AAGTGTCCCA GAGCCCTTGA GTCCGGTGTC TTCCCTGCAA
GCCTCAGTGC CTGGCTCTGT CCCTGGGGTT CTGGGGCCAA CTGGGGGGGT GCTAAACCCC
ACCGTCACCC AGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_011533180.1 CDS 845..1459 Translation
Target ORF information:
RefSeq Version XM_011534878.2 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant X3, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_011534878.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601ATGCCCCAAT TGGGCAGGCA CGCTGGTTAT GGGCACTTTG CAGAAGTTTA TAGCCAATTA
CAACTGTATA AATCAAAGCG CCCTTTGGGG GCTGTCTCTG GGCATCGGTT TCTGCGTCAC
TGTGCACATG CTAGGGAGAG TCCTGGTGGG AATGCCGCCG ACCGGGGAGA AGGCCACAGA
TCAGCCTCGG CCCTCACTTC TCCTTCCTCC ACAGTGAAAA CCAGGACGAA AGACAAATAT
CGAGTGGTGT ACACGGACCA CCAGCGGCTG GAGCTGGAGA AGGAGTTTCA CTACAGTCGC
TACATCACCA TCCGGAGGAA AGCCGAGCTA GCCGCCACGC TGGGGCTCTC TGAGAGGCAG
GTTAAAATCT GGTTTCAGAA CCGCAGAGCA AAGGAGAGGA AAATCAACAA GAAGAAGTTG
CAGCAGCAAC AGCAGCAGCA GCCACCACAG CCGCCTCCGC CGCCACCACA GCCTCCCCAG
CCTCAGCCAG GTCCTCTGAG AAGTGTCCCA GAGCCCTTGA GTCCGGTGTC TTCCCTGCAA
GCCTCAGTGC CTGGCTCTGT CCCTGGGGTT CTGGGGCCAA CTGGGGGGGT GCTAAACCCC
ACCGTCACCC AGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu56808 Clone ID Related Accession (Same CDS sequence) XM_011534879.2 Accession Version XM_011534879.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 591bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1575475200000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform X4 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000013.11) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 6, 2016 this sequence version replaced XM_011534879.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Homo sapiens Updated Annotation Release 109.20191205 Annotation Version :: 109.20191205 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541ATGCCCCAAT TGGGCAGGCA CGCTGGTTAT GGGCACTTTG CAGAAGTTTA TAGCCAATTA
CAACTGTATA AATCAAAGCG CCCTTTGGGG GCTGTCTCTG GGCATCGGTT TCTGCGTCAC
TGTGCACATG CTAGGGAGAG TCCTGGTGGG AATGCCGCCG ACCGGGGAGA AGGCCACAGA
TCAGCCTCGG TGAAAACCAG GACGAAAGAC AAATATCGAG TGGTGTACAC GGACCACCAG
CGGCTGGAGC TGGAGAAGGA GTTTCACTAC AGTCGCTACA TCACCATCCG GAGGAAAGCC
GAGCTAGCCG CCACGCTGGG GCTCTCTGAG AGGCAGGTTA AAATCTGGTT TCAGAACCGC
AGAGCAAAGG AGAGGAAAAT CAACAAGAAG AAGTTGCAGC AGCAACAGCA GCAGCAGCCA
CCACAGCCGC CTCCGCCGCC ACCACAGCCT CCCCAGCCTC AGCCAGGTCC TCTGAGAAGT
GTCCCAGAGC CCTTGAGTCC GGTGTCTTCC CTGCAAGCCT CAGTGCCTGG CTCTGTCCCT
GGGGTTCTGG GGCCAACTGG GGGGGTGCTA AACCCCACCG TCACCCAGTG AThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_011533181.1 CDS 834..1424 Translation
Target ORF information:
RefSeq Version XM_011534879.2 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant X4, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_011534879.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541ATGCCCCAAT TGGGCAGGCA CGCTGGTTAT GGGCACTTTG CAGAAGTTTA TAGCCAATTA
CAACTGTATA AATCAAAGCG CCCTTTGGGG GCTGTCTCTG GGCATCGGTT TCTGCGTCAC
TGTGCACATG CTAGGGAGAG TCCTGGTGGG AATGCCGCCG ACCGGGGAGA AGGCCACAGA
TCAGCCTCGG TGAAAACCAG GACGAAAGAC AAATATCGAG TGGTGTACAC GGACCACCAG
CGGCTGGAGC TGGAGAAGGA GTTTCACTAC AGTCGCTACA TCACCATCCG GAGGAAAGCC
GAGCTAGCCG CCACGCTGGG GCTCTCTGAG AGGCAGGTTA AAATCTGGTT TCAGAACCGC
AGAGCAAAGG AGAGGAAAAT CAACAAGAAG AAGTTGCAGC AGCAACAGCA GCAGCAGCCA
CCACAGCCGC CTCCGCCGCC ACCACAGCCT CCCCAGCCTC AGCCAGGTCC TCTGAGAAGT
GTCCCAGAGC CCTTGAGTCC GGTGTCTTCC CTGCAAGCCT CAGTGCCTGG CTCTGTCCCT
GGGGTTCTGG GGCCAACTGG GGGGGTGCTA AACCCCACCG TCACCCAGTG AThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu14868 Clone ID Related Accession (Same CDS sequence) NM_001265.4 , NM_001265.5 Accession Version NM_001265.4 Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 942bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1492790400000 Organism Homo sapiens(Human) Product homeobox protein CDX-2 Comment REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AL591024.14, BC014461.1 and BI085425.1. On Jan 19, 2012 this sequence version replaced NM_001265.3. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: Y13709.1, BC014461.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMN03267769 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGTCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001256.3 CDS 363..1304 Translation
Target ORF information:
RefSeq Version NM_001265.4 Organism Homo sapiens(Human) Definition Homo sapiens caudal type homeobox 2 (CDX2), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK NM_001265.4
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGTCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OHu14868 Clone ID Related Accession (Same CDS sequence) NM_001265.4 , NM_001265.5 Accession Version NM_001265.5 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 942bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1551024000000 Organism Homo sapiens(human) Product homeobox protein CDX-2 isoform 1 Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AL591024.14, BC014461.1, BI085425.1 and AK000205.1. On Aug 19, 2017 this sequence version replaced NM_001265.4. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: Y13709.1, BC014461.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMN03267769 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGTCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001256.3 CDS 363..1304 Translation
Target ORF information:
RefSeq Version NM_001265.5 Organism Homo sapiens(human) Definition Homo sapiens caudal type homeobox 2 (CDX2), transcript variant 1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK NM_001265.5
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901ATGTACGTGA GCTACCTCCT GGACAAGGAC GTGAGCATGT ACCCTAGCTC CGTGCGCCAC
TCTGGCGGCC TCAACCTGGC GCCGCAGAAC TTCGTCAGCC CCCCGCAGTA CCCGGACTAC
GGCGGTTACC ACGTGGCGGC CGCAGCTGCA GCGGCAGCGA ACTTGGACAG CGCGCAGTCC
CCGGGGCCAT CCTGGCCGGC AGCGTATGGC GCCCCACTCC GGGAGGACTG GAATGGCTAC
GCGCCCGGAG GCGCCGCGGC CGCCGCCAAC GCCGTGGCTC ACGGCCTCAA CGGTGGCTCC
CCGGCCGCAG CCATGGGCTA CAGCAGCCCC GCAGACTACC ATCCGCACCA CCACCCGCAT
CACCACCCGC ACCACCCGGC CGCCGCGCCT TCCTGCGCTT CTGGGCTGCT GCAAACGCTC
AACCCCGGCC CTCCTGGGCC CGCCGCCACC GCTGCCGCCG AGCAGCTGTC TCCCGGCGGC
CAGCGGCGGA ACCTGTGCGA GTGGATGCGG AAGCCGGCGC AGCAGTCCCT CGGCAGCCAA
GTGAAAACCA GGACGAAAGA CAAATATCGA GTGGTGTACA CGGACCACCA GCGGCTGGAG
CTGGAGAAGG AGTTTCACTA CAGTCGCTAC ATCACCATCC GGAGGAAAGC CGAGCTAGCC
GCCACGCTGG GGCTCTCTGA GAGGCAGGTT AAAATCTGGT TTCAGAACCG CAGAGCAAAG
GAGAGGAAAA TCAACAAGAA GAAGTTGCAG CAGCAACAGC AGCAGCAGCC ACCACAGCCG
CCTCCGCCGC CACCACAGCC TCCCCAGCCT CAGCCAGGTC CTCTGAGAAG TGTCCCAGAG
CCCTTGAGTC CGGTGTCTTC CCTGCAAGCC TCAGTGTCTG GCTCTGTCCC TGGGGTTCTG
GGGCCAACTG GGGGGGTGCT AAACCCCACC GTCACCCAGT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
-
PubMed
HNF4α and CDX2 Regulate Intestinal
International journal of molecular sciences20(12)(2019 Jun)
Larsen S,Davidsen J,Dahlgaard K,Pedersen OB,Troelsen JT
Prognostic value of low CDX2 expression in colorectal cancers with a high stromal content - a short report.
Cellular oncology (Dordrecht)42(3)397-403(2019 Jun)
Sandberg TP,Sweere I,van Pelt GW,Putter H,Vermeulen L,Kuppen PJ,Tollenaar RAEM,Mesker WE
Combination of CDX2 expression and T stage improves prognostic prediction of colorectal cancer.
The Journal of international medical research47(5)1829-1842(2019 May)
Xu W,Zhu Y,Shen W,Ding W,Wu T,Guo Y,Chen X,Zhou M,Chen Y,Cui L,Du P
Cdx-2 polymorphism in the vitamin D receptor gene (VDR) marks VDR expression in monocyte/macrophages through VDR promoter methylation.
Immunogenetics70(8)523-532(2018 08)
Meyer V,Bornman L
The VTI1A-TCF4 colon cancer fusion protein is a dominant negative regulator of Wnt signaling and is transcriptionally regulated by intestinal homeodomain factor CDX2.
PloS one13(7)e0200215(2018)
Davidsen J,Larsen S,Coskun M,Gögenur I,Dahlgaard K,Bennett EP,Troelsen JT
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