Smyd3 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Smyd3
Entrez Gene ID	44554
Full Name	SET and MYND domain containing, class 3
Synonyms	Bzd,CG13761,Dmel\CG13761,EG:BACR7C10.4
General protein information	Preferred Names SET and MYND domain containing, class 3 Names CG13761 gene product from transcript CG13761-RB CG13761-PB Smyd3-PB buzidau
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 3A7-3A7\|1-1.2 cM

mRNA and Protein(s)

mRNA	Protein	Name
NM_080029.4	NP_524768.2	SET and MYND domain containing, class 3

Pathways from BioSystems

Homologies

Rattus norvegicus (Norway rat)	Smyd3	NP_001020933.1
Caenorhabditis elegans (roundworm)	set-30	NP_508850.2
Oryza sativa (rice)	Os03g0704200	NP_001173603.1
Mus musculus (house mouse)	Smyd3	NP_081464.1
Gallus gallus (chicken)	SMYD3	XP_419536.1
Xenopus tropicalis (tropical clawed frog)	smyd3	XP_002931556.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP008954	XP_319707.4
Schizosaccharomyces pombe (fission yeast)	set6	NP_596514.1
Danio rerio (zebrafish)	smyd3	NP_001032477.1
Drosophila melanogaster (fruit fly)	Bzd	NP_524768.2
Pan troglodytes (chimpanzee)	SMYD3	XP_514316.3
Bos taurus (cattle)	SMYD3	NP_001069874.1
Homo sapiens (human)	SMYD3	NP_001161212.1
Macaca mulatta (Rhesus monkey)	SMYD3	XP_001089022.1
Canis lupus familiaris (dog)	SMYD3	XP_537223.4
Caenorhabditis elegans (roundworm)	set-18	NP_492772.1
Arabidopsis thaliana (thale cress)	SDG37	NP_849969.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Smyd3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Smyd3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa02349	NM_080029.4 Latest version!	Drosophila melanogaster SET and MYND domain containing, class 3 (Smyd3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Smyd3 ( NM_080029.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524768.2 Drosophila melanogaster SET and MYND domain containing, class 3 (Smyd3), mRNA.

Price & Availability↑

CloneID	OFa02349
Clone ID Related Accession (Same CDS sequence)	NM_080029.4
Accession Version	NM_080029.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	SET and MYND domain containing, class 3
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_080029.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGGCCACCG CCACCGTTGG TTCATCCAGA TCCGCAACCA CATCCGCAAC CGCATCCGCA 
TGCTCATCCA AATCCAAGAA CCTAAAGAAT CCGGCGCCGC AAATAAAAAG GGGACAGCGG 
ATCCTCACGG AGAAACCATT CGCCTTCGTC TTGAAATCAC AGTACCGCCT GGAGCGGTGC 
GATAACTGCC TGGAGGCGAC CAAGGTGCTG AAGTGCTCCA ACTGCAGGTA TGTGTCCTAC 
TGCCACCGCT CATGCCAGAT GCAAGCTTGG GGCCAGCACA AGCACGAGTG TCCTTTCCTC 
AAGAAGGTGC ATCCTCGAGT TGTGCCCGAT GCTGCCCGAA TGCTCTGCCG ACTGATCCTG 
CGCCTGGAGC ACGGCGGAGA CCTGATCCGC GGCTATTACA CCGAGCACGG CTCCCGCAAG 
TTTCGCGATC TCATGTCCCA TTACGCCGAA ATCAAGAACG ATCCCATGCG ACTGGAGCAC 
TTGGACTCGC TGCATGCCGT CCTCACCGAT ATGATGGCCG AGAGTCCCAG CACGGTGCCA 
AACAAGACGG AACTGATGAG CATCTATGGT CGCCTGATCA CCAATGGCTT CAATATCTTG 
GACGCCGAGA TGAACTCAAT TGCCACGGCC ATATATCTGG GCGTCTCGAT TACGGACCAT 
AGCTGCCAGC CAAATGCGGT CGCCACCTTC GAGGGCAACG AGCTGCACGT CCACGCGATC 
GAGGACATGG AATGCCTGGA CTGGTCGAAA ATCTTCATCA GCTACATCGA CCTGCTCAAT 
ACGCCGGAGC AGAGGCGTCT GGACCTCAAG GAGCACTACT ACTTCCTATG CGTGTGCAGC 
AAGTGCACGG ATGCCAAGGA ATCGAAGGAG ATGCTGGCTG CCCTGTGTCC CAATCGCAAC 
TGCGGTGCGG GAATCAGTGT GGACCGCAAT AATTGCCCGC GATGCGATGC CGGCATCAGT 
CCCAAGTTGA GAAATGCCTT CAACGAGGCG ATGACTCTGA CCCGGCACAA TCTGGAGAAC 
ATGAAGGACG TGGCCTATCT CGATGTGTGC AAGGTGTGTC TGGACAAGCA GACTGGCGTG 
TTCCATCCCC TGAATGTGTG GTACGTCAAG ACGCTCGATG CGGCCTTCGA AGCAGCCATC 
GAAGTGGGCA AGTGGAGCGA CGCCCTGGAT TACGGGCAAC GTTTGCTGCC AGGCTTTCGA 
AAATACCACG GACCCTGGAA TCCGCTATTG GGCCTGCTTC ACATGAAGCT GGGCAAGATT 
CAGCTCTACG AGGGCCATTC CAAGGAGGCA CTGCACCATC TGGAGGAGGC CCAACGCATC 
CTAACCGTCA CCCACGGCCG AGATCACAGA CTGCTTACTG AGCAGCTATA CATGCTCGTT 
CTACAAGCGC GACAAGAGGC GCACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524768.2
CDS	210..1616
Translation	MATATVGSSRSATTSATASACSSKSKNLKNPAPQIKRGQRILTEKPFAFVLKSQYRLERCDNCLEATKVLKCSNCRYVSYCHRSCQMQAWGQHKHECPFLKKVHPRVVPDAARMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYAEIKNDPMRLEHLDSLHAVLTDMMAESPSTVPNKTELMSIYGRLITNGFNILDAEMNSIATAIYLGVSITDHSCQPNAVATFEGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCTDAKESKEMLAALCPNRNCGAGISVDRNNCPRCDAGISPKLRNAFNEAMTLTRHNLENMKDVAYLDVCKVCLDKQTGVFHPLNVWYVKTLDAAFEAAIEVGKWSDALDYGQRLLPGFRKYHGPWNPLLGLLHMKLGKIQLYEGHSKEALHHLEEAQRILTVTHGRDHRLLTEQLYMLVLQARQEAH

Target ORF information:

RefSeq Version	NM_080029.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster SET and MYND domain containing, class 3 (Smyd3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_080029.4

ORF Insert Sequence:

ATGGCCACCG CCACCGTTGG TTCATCCAGA TCCGCAACCA CATCCGCAAC CGCATCCGCA 
TGCTCATCCA AATCCAAGAA CCTAAAGAAT CCGGCGCCGC AAATAAAAAG GGGACAGCGG 
ATCCTCACGG AGAAACCATT CGCCTTCGTC TTGAAATCAC AGTACCGCCT GGAGCGGTGC 
GATAACTGCC TGGAGGCGAC CAAGGTGCTG AAGTGCTCCA ACTGCAGGTA TGTGTCCTAC 
TGCCACCGCT CATGCCAGAT GCAAGCTTGG GGCCAGCACA AGCACGAGTG TCCTTTCCTC 
AAGAAGGTGC ATCCTCGAGT TGTGCCCGAT GCTGCCCGAA TGCTCTGCCG ACTGATCCTG 
CGCCTGGAGC ACGGCGGAGA CCTGATCCGC GGCTATTACA CCGAGCACGG CTCCCGCAAG 
TTTCGCGATC TCATGTCCCA TTACGCCGAA ATCAAGAACG ATCCCATGCG ACTGGAGCAC 
TTGGACTCGC TGCATGCCGT CCTCACCGAT ATGATGGCCG AGAGTCCCAG CACGGTGCCA 
AACAAGACGG AACTGATGAG CATCTATGGT CGCCTGATCA CCAATGGCTT CAATATCTTG 
GACGCCGAGA TGAACTCAAT TGCCACGGCC ATATATCTGG GCGTCTCGAT TACGGACCAT 
AGCTGCCAGC CAAATGCGGT CGCCACCTTC GAGGGCAACG AGCTGCACGT CCACGCGATC 
GAGGACATGG AATGCCTGGA CTGGTCGAAA ATCTTCATCA GCTACATCGA CCTGCTCAAT 
ACGCCGGAGC AGAGGCGTCT GGACCTCAAG GAGCACTACT ACTTCCTATG CGTGTGCAGC 
AAGTGCACGG ATGCCAAGGA ATCGAAGGAG ATGCTGGCTG CCCTGTGTCC CAATCGCAAC 
TGCGGTGCGG GAATCAGTGT GGACCGCAAT AATTGCCCGC GATGCGATGC CGGCATCAGT 
CCCAAGTTGA GAAATGCCTT CAACGAGGCG ATGACTCTGA CCCGGCACAA TCTGGAGAAC 
ATGAAGGACG TGGCCTATCT CGATGTGTGC AAGGTGTGTC TGGACAAGCA GACTGGCGTG 
TTCCATCCCC TGAATGTGTG GTACGTCAAG ACGCTCGATG CGGCCTTCGA AGCAGCCATC 
GAAGTGGGCA AGTGGAGCGA CGCCCTGGAT TACGGGCAAC GTTTGCTGCC AGGCTTTCGA 
AAATACCACG GACCCTGGAA TCCGCTATTG GGCCTGCTTC ACATGAAGCT GGGCAAGATT 
CAGCTCTACG AGGGCCATTC CAAGGAGGCA CTGCACCATC TGGAGGAGGC CCAACGCATC 
CTAACCGTCA CCCACGGCCG AGATCACAGA CTGCTTACTG AGCAGCTATA CATGCTCGTT 
CTACAAGCGC GACAAGAGGC GCACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Smyd3 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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