alphaTub84D cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	alphaTub84D
Entrez Gene ID	40904
Full Name	alpha-Tubulin at 84D
Synonyms	3t,ALPHA 84D,CG2512,D.m.ALPHA-84D,DTA4,Dmel\CG2512,T,Tub,Tub1A,aTub84D,alpha-Tub,alpha-Tub84D,alpha-tub,alpha-tub84D,alpha-tubulin,alpha3,alpha3t,alpha84D,alphaTUB,alphaTUB84D,alphaTub,alphaTub3,alphaTub84
General protein information	Preferred Names alpha-Tubulin at 84D Names CG2512 gene product from transcript CG2512-RA CG2512-PA Tubulin-alpha3 alpha tubulin alpha-Tubulin alphaT alphaTub84D-PA alphaTubulin 84D alphatubulin tubulin tubulin alpha-3 chain tubulin alpha3 tubulin at 84D
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 84D9-84D9

mRNA and Protein(s)

mRNA	Protein	Name
NM_079540.6	NP_524264.1	alpha-Tubulin at 84D

Pathways from BioSystems

Homologies

Eremothecium gossypii	AGOS_AFR441C	NP_985988.1
Mus musculus (house mouse)	Tuba1c	NP_033474.1
Arabidopsis thaliana (thale cress)	TUA4	NP_171974.1
Canis lupus familiaris (dog)	TUBA1C	XP_003640008.1
Gallus gallus (chicken)	LOC100857247	XP_004942898.1
Bos taurus (cattle)	LOC100141266	XP_005206417.1
Schizosaccharomyces pombe (fission yeast)	nda2	NP_596774.1
Neurospora crassa	NCU09468	XP_963223.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP010971	XP_309723.4
Pan troglodytes (chimpanzee)	TUBA1C	XP_509043.3
Kluyveromyces lactis	KLLA0C16874g	XP_452955.1
Oryza sativa (rice)	Os03g0726100	NP_001051132.1
Homo sapiens (human)	TUBA1C	NP_116093.1
Rattus norvegicus (Norway rat)	Tuba1c	NP_001011995.1
Danio rerio (zebrafish)	tuba1b	NP_919369.2
Caenorhabditis elegans (roundworm)	tba-2	NP_001021050.1
Arabidopsis thaliana (thale cress)	TUA6	NP_193232.1
Oryza sativa (rice)	Os11g0247300	NP_001067613.1
Magnaporthe oryzae (rice blast fungus)	MGG_06650	XP_003709356.1
Schizosaccharomyces pombe (fission yeast)	atb2	NP_595106.1
Macaca mulatta (Rhesus monkey)	LOC710110	XP_002808026.1
Drosophila melanogaster (fruit fly)	alphaTub84B	NP_476772.1
Caenorhabditis elegans (roundworm)	tba-4	NP_496351.1
Caenorhabditis elegans (roundworm)	tba-1	NP_001251213.1
Rattus norvegicus (Norway rat)	LOC100909441	XP_003749402.1
Bos taurus (cattle)	TUBA1C	NP_001029376.1
Drosophila melanogaster (fruit fly)	alphaTub84D	NP_524264.1
Saccharomyces cerevisiae (baker's yeast)	TUB1	NP_013625.1
Arabidopsis thaliana (thale cress)	TUA2	NP_175423.1
Xenopus tropicalis (tropical clawed frog)	tuba1c	NP_989078.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following alphaTub84D gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the alphaTub84D cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa07937	NM_079540.6 Latest version!	Drosophila melanogaster alpha-Tubulin at 84D (alphaTub84D), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

alphaTub84D ( NM_079540.6 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_524264.1 Drosophila melanogaster alpha-Tubulin at 84D (alphaTub84D), mRNA.

Price & Availability↑

CloneID	OFa07937
Clone ID Related Accession (Same CDS sequence)	NM_079540.6
Accession Version	NM_079540.6 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	alpha-Tubulin at 84D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_079540.5. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGCGAAT GTATCTCTAT CCACGTGGGC CAGGCCGGAG TCCAGATTGG AAATGCCTGC 
TGGGAGCTCT ATTGCCTGGA GCACGGCATC CAGCCCGATG GCCAGATGCC CTCCGACAAG 
ACCGTAGGCG GAGGTGATGA CTCGTTTAAC ACCTTCTTCA GCGAGACTGG AGCTGGCAAG 
CACGTGCCTC GCGCCGTGTT CGTGGATCTG GAGCCCACTG TGGTCGACGA GGTCCGTACT 
GGAACCTACC GTCAGCTGTT CCACCCCGAG CAACTGATCA CCGGTAAGGA GGATGCGGCC 
AACAACTACG CCCGTGGCCA CTACACCATT GGCAAGGAGA TCGTCGACCT GGTGCTGGAC 
AGGATCCGCA AGCTGGCCGA TCAATGCACC GGTCTGCAGG GCTTCCTCAT CTTCCACTCG 
TTCGGTGGAG GTACCGGCTC CGGCTTCACC TCGCTGCTGA TGGAGCGTCT CTCCGTGGAC 
TACGGCAAGA AGTCCAAGCT GGAGTTCGCC GTGTACCCAG CTCCGCAGGT GTCCACCGCC 
GTGGTGGAGC CCTACAACTC CATCCTAACC ACGCACACCA CCCTCGAGCA CTCCGACTGC 
GCCTTTATGG TGGACAACGA GGCCATCTAC GACATCTGTC GCCGAAACCT GGACATCGAA 
CGACCCACTT ACACTAACCT GAATCGTTTA ATCGGCCAAA TAGTGTCCTC GATCACCGCC 
TCTCTGCGAT TCGATGGAGC CCTAAATGTG GACCTCACCG AGTTCCAGAC CAACCTGGTT 
CCTTACCCCC GCATCCACTT CCCGCTGGTG ACGTACGCTC CCGTCATCTC CGCCGAGAAG 
GCCTACCACG AGCAGCTGTC GGTGGCCGAG ATCACCAACG CCTGCTTCGA GCCAGCCAAC 
CAGATGGTCA AGGTGGATCC CCGTCACGGC AAGTACATGG CCTGCTGCAT GCTGTATCGC 
GGCGATGTGG TGCCCAAGGA CGTGAACGCC GCCATCGCCA CCATCAAGAC AAAGCGTACC 
ATTCAGTTCG TGGACTGGTG CCCCACCGGC TTCAAGGTGG GCATCAACTA CCAGCCACCC 
ACTGTCGTCC CAGGCGGGGA TCTGGCCAAG GTGCAGCGTG CCGTGTGCAT GTTGTCCAAT 
ACCACGGCTA TTGCCGAGGC CTGGGCCCGT CTGGACCACA AGTTCGATCT GATGTACGCC 
AAGAGGGCCT TCGTCCACTG GTATGTTGGT GAGGGCATGG AGGAGGGCGA GTTCTCCGAG 
GCCCGTGAGG ATCTGGCTGC CCTCGAGAAG GACTACGAGG AGGTCGGCAT GGATTCCGGT 
GACGGTGAGG GCGAGGGTGC TGAGGAGTAC TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_524264.1
CDS	507..1859
Translation	MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY

Target ORF information:

RefSeq Version	NM_079540.6
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster alpha-Tubulin at 84D (alphaTub84D), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_079540.6

ORF Insert Sequence:

ATGCGCGAAT GTATCTCTAT CCACGTGGGC CAGGCCGGAG TCCAGATTGG AAATGCCTGC 
TGGGAGCTCT ATTGCCTGGA GCACGGCATC CAGCCCGATG GCCAGATGCC CTCCGACAAG 
ACCGTAGGCG GAGGTGATGA CTCGTTTAAC ACCTTCTTCA GCGAGACTGG AGCTGGCAAG 
CACGTGCCTC GCGCCGTGTT CGTGGATCTG GAGCCCACTG TGGTCGACGA GGTCCGTACT 
GGAACCTACC GTCAGCTGTT CCACCCCGAG CAACTGATCA CCGGTAAGGA GGATGCGGCC 
AACAACTACG CCCGTGGCCA CTACACCATT GGCAAGGAGA TCGTCGACCT GGTGCTGGAC 
AGGATCCGCA AGCTGGCCGA TCAATGCACC GGTCTGCAGG GCTTCCTCAT CTTCCACTCG 
TTCGGTGGAG GTACCGGCTC CGGCTTCACC TCGCTGCTGA TGGAGCGTCT CTCCGTGGAC 
TACGGCAAGA AGTCCAAGCT GGAGTTCGCC GTGTACCCAG CTCCGCAGGT GTCCACCGCC 
GTGGTGGAGC CCTACAACTC CATCCTAACC ACGCACACCA CCCTCGAGCA CTCCGACTGC 
GCCTTTATGG TGGACAACGA GGCCATCTAC GACATCTGTC GCCGAAACCT GGACATCGAA 
CGACCCACTT ACACTAACCT GAATCGTTTA ATCGGCCAAA TAGTGTCCTC GATCACCGCC 
TCTCTGCGAT TCGATGGAGC CCTAAATGTG GACCTCACCG AGTTCCAGAC CAACCTGGTT 
CCTTACCCCC GCATCCACTT CCCGCTGGTG ACGTACGCTC CCGTCATCTC CGCCGAGAAG 
GCCTACCACG AGCAGCTGTC GGTGGCCGAG ATCACCAACG CCTGCTTCGA GCCAGCCAAC 
CAGATGGTCA AGGTGGATCC CCGTCACGGC AAGTACATGG CCTGCTGCAT GCTGTATCGC 
GGCGATGTGG TGCCCAAGGA CGTGAACGCC GCCATCGCCA CCATCAAGAC AAAGCGTACC 
ATTCAGTTCG TGGACTGGTG CCCCACCGGC TTCAAGGTGG GCATCAACTA CCAGCCACCC 
ACTGTCGTCC CAGGCGGGGA TCTGGCCAAG GTGCAGCGTG CCGTGTGCAT GTTGTCCAAT 
ACCACGGCTA TTGCCGAGGC CTGGGCCCGT CTGGACCACA AGTTCGATCT GATGTACGCC 
AAGAGGGCCT TCGTCCACTG GTATGTTGGT GAGGGCATGG AGGAGGGCGA GTTCTCCGAG 
GCCCGTGAGG ATCTGGCTGC CCTCGAGAAG GACTACGAGG AGGTCGGCAT GGATTCCGGT 
GACGGTGAGG GCGAGGGTGC TGAGGAGTAC TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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alphaTub84D cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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