cn cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	cn
Entrez Gene ID	35724
Full Name	cinnabar
Synonyms	CG1555,Dmel\CG1555,Dmel\cn,KMO
General protein information	Preferred Names cinnabar Names CG1555 gene product from transcript CG1555-RB CG1555-PB cn-PB
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2R Map Location: 43E16-43E16\|2-57.5 cM

mRNA and Protein(s)

mRNA	Protein	Name
NM_078927.3	NP_523651.4	cinnabar

Pathways from BioSystems

Homologies

Saccharomyces cerevisiae (baker's yeast)	BNA4	NP_009454.1
Magnaporthe oryzae (rice blast fungus)	MGG_00805	XP_003718179.1
Neurospora crassa	NCU06924	XP_959271.2
Danio rerio (zebrafish)	LOC101885014	XP_005169588.1
Macaca mulatta (Rhesus monkey)	KMO	XP_001093900.1
Bos taurus (cattle)	KMO	NP_001230227.1
Rattus norvegicus (Norway rat)	Kmo	NP_067604.1
Eremothecium gossypii	AGOS_AGL276W	NP_986391.1
Homo sapiens (human)	KMO	NP_003670.2
Pan troglodytes (chimpanzee)	KMO	XP_001160394.2
Canis lupus familiaris (dog)	KMO	NP_001182441.1
Mus musculus (house mouse)	Kmo	NP_598570.1
Danio rerio (zebrafish)	kmo	NP_001035396.2
Caenorhabditis elegans (roundworm)	R07B7.5	NP_506025.1
Anopheles gambiae (African malaria mosquito)	KMO_ANOGA	XP_315983.2
Gallus gallus (chicken)	KMO	XP_004942624.1
Drosophila melanogaster (fruit fly)	cn	NP_523651.3
Xenopus tropicalis (tropical clawed frog)	kmo	NP_001006690.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following cn gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cn cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa21700	NM_078927.3 Latest version!	Drosophila melanogaster cinnabar (cn), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cn ( NM_078927.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_523651.4 Drosophila melanogaster cinnabar (cn), mRNA.

Price & Availability↑

CloneID	OFa21700
Clone ID Related Accession (Same CDS sequence)	NM_078927.3
Accession Version	NM_078927.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1344bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	cinnabar
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033778). On Jul 15, 2014 this sequence version replaced NM_078927.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGCCCAG GAATCGTTAG CCAGGAGGTA AACGGCCGCC AGGAGCCAAC AGAAGCTGCG 
AGGGACGAGA GACATGGACG ACGGCGCCGG GTGGCGGTTA TTGGAGCAGG ACTTGTGGGT 
TCTCTGGCAG CCTTGAACTT TGCCCGCATG GGCAACCACG TGGATTTGTA CGAGTACCGG 
GAGGATATCC GCGAGGCCCT AGTGGTTCAG GGCAGGAGTA TTAACCTGGC TCTTTCGCAG 
CGTGGCCGTA AGGCGCTGGC CGCCGTGGGT CTGGAGCAAG AGGTGCTGGC CACCGCCATA 
CCCATGCGAG GCAGAATGCT CCACGATGTG CGAGGAAACT CCAGTGTGGT CCTATACGAT 
CCCATTAACA ATCAATGCCT GTACTCCGTG GGACGTCGAC AGCTGAACGA AGTCCTTTTG 
AATGCCTGCG ATAAGCTGCC CAATATACGC TGCCACTTCG AGCACAAGCT GACAAGTGCC 
AATCTGCGAG AGGGATCCAT GGAGTTCCGC AATCCCGCCA AGGAAGCCGT AGCTGCCCAT 
GCTGATCTTA TAGTCGGCTG CGATGGTGCC TTCAGTAGTG TGCGCCAGCA CTTGGTCCGT 
TTGCCGGGCT TCAACTACTC CCAGGAGTAC ATAGAAACGG GGTATCTGGA GCTCTGCATA 
CCCTCGAAAT CGGGAGACTT CCAGATGCCT GCCAACTATC TGCACATATG GCCGCGTAAC 
ACCTTCATGA TGATTGCCCT GCCGAATCAG GATAAGTCTT TCACGGTCAC GCTGTCCATG 
CCCTTTGAGA TCTTCGCTGG CATTCAGAAT CAAAACGATC TCCTGGAATT CTTTAAGCTG 
AACTTCCGGG ACGCACTGCC ACTGATTGGA GAGCAACAGC TCATAAAGGA CTTCTTCAAG 
ACCAGGCCAC AGTTTCTGGT GTCCATCAAG TGCCGGCCGT ATCATTATGC GGATAAGGCA 
CTGATCCTGG GCGATGCCGC CCATGCGATG GTTCCGTACT ACGGCCAGGG TATGAATGCT 
GGAATGGAGG ATGTCACGCT GCTCACCGAC ATTTTGGCCA AGCAGCTGCC ACTGGACGAG 
ACGTTGGCCC TGTTCACCGA ATCCCGCTGG CAGGACGCCT TCGCCATTTG CGACCTGGCC 
ATGTACAATT ATGTGGAGAT GCGAGACCTG ACCAAACGTT GGACATTCCG GCTGGACCTA 
CTACTCAAAA GCTCTAAAAG CTTTTCTTCG CCGAAGGTAG AAAGACATGG ATGGTTTCGA 
GTATTTAAAG AGGGGGAGCT TAGTATGGTC AGAGAGCGAG AGAGACAGCG AGCTGCTCAT 
TTCCGACTTA ATTGTTGTTG CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_523651.4
CDS	39..1382
Translation	MSPGIVSQEVNGRQEPTEAARDERHGRRRRVAVIGAGLVGSLAALNFARMGNHVDLYEYREDIREALVVQGRSINLALSQRGRKALAAVGLEQEVLATAIPMRGRMLHDVRGNSSVVLYDPINNQCLYSVGRRQLNEVLLNACDKLPNIRCHFEHKLTSANLREGSMEFRNPAKEAVAAHADLIVGCDGAFSSVRQHLVRLPGFNYSQEYIETGYLELCIPSKSGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEIFAGIQNQNDLLEFFKLNFRDALPLIGEQQLIKDFFKTRPQFLVSIKCRPYHYADKALILGDAAHAMVPYYGQGMNAGMEDVTLLTDILAKQLPLDETLALFTESRWQDAFAICDLAMYNYVEMRDLTKRWTFRLDLLLKSSKSFSSPKVERHGWFRVFKEGELSMVRERERQRAAHFRLNCCC

Target ORF information:

RefSeq Version	NM_078927.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster cinnabar (cn), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_078927.3

ORF Insert Sequence:

ATGAGCCCAG GAATCGTTAG CCAGGAGGTA AACGGCCGCC AGGAGCCAAC AGAAGCTGCG 
AGGGACGAGA GACATGGACG ACGGCGCCGG GTGGCGGTTA TTGGAGCAGG ACTTGTGGGT 
TCTCTGGCAG CCTTGAACTT TGCCCGCATG GGCAACCACG TGGATTTGTA CGAGTACCGG 
GAGGATATCC GCGAGGCCCT AGTGGTTCAG GGCAGGAGTA TTAACCTGGC TCTTTCGCAG 
CGTGGCCGTA AGGCGCTGGC CGCCGTGGGT CTGGAGCAAG AGGTGCTGGC CACCGCCATA 
CCCATGCGAG GCAGAATGCT CCACGATGTG CGAGGAAACT CCAGTGTGGT CCTATACGAT 
CCCATTAACA ATCAATGCCT GTACTCCGTG GGACGTCGAC AGCTGAACGA AGTCCTTTTG 
AATGCCTGCG ATAAGCTGCC CAATATACGC TGCCACTTCG AGCACAAGCT GACAAGTGCC 
AATCTGCGAG AGGGATCCAT GGAGTTCCGC AATCCCGCCA AGGAAGCCGT AGCTGCCCAT 
GCTGATCTTA TAGTCGGCTG CGATGGTGCC TTCAGTAGTG TGCGCCAGCA CTTGGTCCGT 
TTGCCGGGCT TCAACTACTC CCAGGAGTAC ATAGAAACGG GGTATCTGGA GCTCTGCATA 
CCCTCGAAAT CGGGAGACTT CCAGATGCCT GCCAACTATC TGCACATATG GCCGCGTAAC 
ACCTTCATGA TGATTGCCCT GCCGAATCAG GATAAGTCTT TCACGGTCAC GCTGTCCATG 
CCCTTTGAGA TCTTCGCTGG CATTCAGAAT CAAAACGATC TCCTGGAATT CTTTAAGCTG 
AACTTCCGGG ACGCACTGCC ACTGATTGGA GAGCAACAGC TCATAAAGGA CTTCTTCAAG 
ACCAGGCCAC AGTTTCTGGT GTCCATCAAG TGCCGGCCGT ATCATTATGC GGATAAGGCA 
CTGATCCTGG GCGATGCCGC CCATGCGATG GTTCCGTACT ACGGCCAGGG TATGAATGCT 
GGAATGGAGG ATGTCACGCT GCTCACCGAC ATTTTGGCCA AGCAGCTGCC ACTGGACGAG 
ACGTTGGCCC TGTTCACCGA ATCCCGCTGG CAGGACGCCT TCGCCATTTG CGACCTGGCC 
ATGTACAATT ATGTGGAGAT GCGAGACCTG ACCAAACGTT GGACATTCCG GCTGGACCTA 
CTACTCAAAA GCTCTAAAAG CTTTTCTTCG CCGAAGGTAG AAAGACATGG ATGGTTTCGA 
GTATTTAAAG AGGGGGAGCT TAGTATGGTC AGAGAGCGAG AGAGACAGCG AGCTGCTCAT 
TTCCGACTTA ATTGTTGTTG CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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cn cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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