r-cup cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	r-cup
Entrez Gene ID	33075
Full Name	ryder cup
Synonyms	CG10998,Dmel\CG10998
General protein information	Preferred Names ryder cup Names CG10998 gene product from transcript CG10998-RA CG10998-PA r-cup-PA ryder-cup
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 19E7-19E7

mRNA and Protein(s)

mRNA	Protein	Name
NM_134575.2	NP_608419.1	ryder cup

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	wa-cup	NP_649721.2
Drosophila melanogaster (fruit fly)	CG15128	NP_611441.1
Drosophila melanogaster (fruit fly)	p-cup	NP_573216.1
Drosophila melanogaster (fruit fly)	r-cup	NP_608419.1
Drosophila melanogaster (fruit fly)	CG7634	NP_649332.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following r-cup gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the r-cup cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa03243	NM_134575.2 Latest version!	Drosophila melanogaster ryder cup (r-cup), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

r-cup ( NM_134575.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_608419.1 Drosophila melanogaster ryder cup (r-cup), mRNA.

Price & Availability↑

CloneID	OFa03243
Clone ID Related Accession (Same CDS sequence)	NM_134575.2
Accession Version	NM_134575.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1785bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556035200000
Organism	Drosophila melanogaster(fruit fly)
Product	ryder cup
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Nov 6, 2002 this sequence version replaced NM_134575.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAAGGACT CGAGTCAATC GGCGCCGGCA GGCCTTTTGG TGGCAAATCT GAAGTCTTGG 
GAAACGTTCG ACTGGCCGAC GGAGCAGCAG CGTTGGATCT ACCGCAGTTG GGGCCAGTAC 
TTTGCGCGGA TGCGGAAGAA CACCTTTGCC CAGAAGTACT TCGACAAATG CATCACAGAG 
AATGAGAGCA CGGATCACAA GGCTCTTTAT CTGCGCAGCA AATTCAAGAG ATCGGTGGCC 
CTGACGCAGG ACGCATTGGA GGATAGCTTG AGGGCCATGG AGGTAAGGCA GGCGTGGGAC 
GCAAATGTGT CCATGGAGCT CGGAGATGCG CTCTACGATT TGAATCGGTT TGAGGAGAAC 
AAGAGCCTGC TGCACGACAA TGTCCGTCGG CATGCGGGCA CCGCTCTAAA GAGCTTCGAG 
AATCGCCTCG TGGTAGTCGA TGAGAATCTC AAGGATTGCA CGGGCTTCAG CCTGGCCAAC 
TTCTTCATGG AGCATTCCGC GCAGCTGCCC GGCTTCTATG CCCATCAGCA GGAGGAGCTT 
CGAAGGGCCG ACAGGCGGCC GCTGTGGAAA ATCCTCAAGG AGCGAAAGGA GTGTGATGTC 
CAGAGCAGGA TCGATCGCAA GGAGGTGATG CTCTCCCCAC TGGAAAGAGA GCGCAGGCGT 
CGCAAGACCA AAATATTTTA TCAGAACTAT TTGGGTCGCA GCTGGACCGA TTTTTTCTTT 
CTGAAAACAC TTCGCCGGCA TCCCAACTGT CTTCTAGACA ATCATTTCGG CTCCTCGGCG 
GACCGCACCA AGTATCTTGA GTATGCGTTC CAGCGCCTTA AGACCTTCAC ACGGATGCTC 
CAGGCAAGGA GACCCATGTA CAAGGAGTAC TTCCATCGGA ATCCCCAGAT AGAGGCTCGC 
ATGCGGGATG CGAACTTGTT CCGGATCCAG TACCAAACCA GGCGAAACAT GGTGAGCATC 
CTGCGGACCA TTAAGGTGCT GCGGGGGCGG AATGATATCA AGCGCCTGCG CAAGTTTGTG 
GAGGAAGTGA TGGGCAGCTA CGTGGTCATC AAGACGAATC GACTGATGCC CTGGAAGGCG 
GAGTTCATGA ACGAGGTGTA CAACAATCTG GCCCTCAGTT TGTGCGAGGG ATACCGCCTG 
CCGCCCACAC GGGTCACGCC CTACGACAAG AGCGCCATGT GCCAGCTGCT CAACATACCG 
GTGGCCAAGC CGCTGGAGCA CACGGAGCTC ATCTTCGGGG ATCGATCCAC CTACTCCTAT 
GCCGGCGCCG ACAAACAGAG CACCGATCGA TTGGCAGACC AAAACCAAAT CGAGTATCTG 
GAGAAACGAC TTCTATTCGC CCGCCTGCCG ATCGAAAGGA GCTACTTGCT CCATGAGCTG 
GCCGATCGGC ATATGCAGAA GAACCACTTT GTGCAGAGCC TGTCCTACGC CCAGAAGGCC 
ATCGAGGAGG CCAGGGTATG CAATAGCCTG ATCTGGGAGT TTCTCAGCAC CATGCTGATG 
GCCAAGTCAC ACGCGGTGCT CCACAAGTAC GAGCGCCAAA CGGAGGTGCT CAACTCCGCC 
TACGAACTGG CCGCCCAGCT CAAGTCGCCC CAACTGTGCA CCTTCATCGA ACTGTGCCGC 
ATGCTCAACA AGGACTACAT CACGTTGCGC AAGATGTCCC AACTGGTGAC CACCAAACGG 
CTGCGCACCA AAATCTCCAA CAGGTCCAGT TTCCTCAGCT CACCCAACTG TTCGCCCAAC 
TTCTCGGAAT TCAAAAAGGA AGAGTATGGT CATTTGGCCG CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_608419.1
CDS	99..1883
Translation	MKDSSQSAPAGLLVANLKSWETFDWPTEQQRWIYRSWGQYFARMRKNTFAQKYFDKCITENESTDHKALYLRSKFKRSVALTQDALEDSLRAMEVRQAWDANVSMELGDALYDLNRFEENKSLLHDNVRRHAGTALKSFENRLVVVDENLKDCTGFSLANFFMEHSAQLPGFYAHQQEELRRADRRPLWKILKERKECDVQSRIDRKEVMLSPLERERRRRKTKIFYQNYLGRSWTDFFFLKTLRRHPNCLLDNHFGSSADRTKYLEYAFQRLKTFTRMLQARRPMYKEYFHRNPQIEARMRDANLFRIQYQTRRNMVSILRTIKVLRGRNDIKRLRKFVEEVMGSYVVIKTNRLMPWKAEFMNEVYNNLALSLCEGYRLPPTRVTPYDKSAMCQLLNIPVAKPLEHTELIFGDRSTYSYAGADKQSTDRLADQNQIEYLEKRLLFARLPIERSYLLHELADRHMQKNHFVQSLSYAQKAIEEARVCNSLIWEFLSTMLMAKSHAVLHKYERQTEVLNSAYELAAQLKSPQLCTFIELCRMLNKDYITLRKMSQLVTTKRLRTKISNRSSFLSSPNCSPNFSEFKKEEYGHLAA

Target ORF information:

RefSeq Version	NM_134575.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ryder cup (r-cup), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_134575.2

ORF Insert Sequence:

ATGAAGGACT CGAGTCAATC GGCGCCGGCA GGCCTTTTGG TGGCAAATCT GAAGTCTTGG 
GAAACGTTCG ACTGGCCGAC GGAGCAGCAG CGTTGGATCT ACCGCAGTTG GGGCCAGTAC 
TTTGCGCGGA TGCGGAAGAA CACCTTTGCC CAGAAGTACT TCGACAAATG CATCACAGAG 
AATGAGAGCA CGGATCACAA GGCTCTTTAT CTGCGCAGCA AATTCAAGAG ATCGGTGGCC 
CTGACGCAGG ACGCATTGGA GGATAGCTTG AGGGCCATGG AGGTAAGGCA GGCGTGGGAC 
GCAAATGTGT CCATGGAGCT CGGAGATGCG CTCTACGATT TGAATCGGTT TGAGGAGAAC 
AAGAGCCTGC TGCACGACAA TGTCCGTCGG CATGCGGGCA CCGCTCTAAA GAGCTTCGAG 
AATCGCCTCG TGGTAGTCGA TGAGAATCTC AAGGATTGCA CGGGCTTCAG CCTGGCCAAC 
TTCTTCATGG AGCATTCCGC GCAGCTGCCC GGCTTCTATG CCCATCAGCA GGAGGAGCTT 
CGAAGGGCCG ACAGGCGGCC GCTGTGGAAA ATCCTCAAGG AGCGAAAGGA GTGTGATGTC 
CAGAGCAGGA TCGATCGCAA GGAGGTGATG CTCTCCCCAC TGGAAAGAGA GCGCAGGCGT 
CGCAAGACCA AAATATTTTA TCAGAACTAT TTGGGTCGCA GCTGGACCGA TTTTTTCTTT 
CTGAAAACAC TTCGCCGGCA TCCCAACTGT CTTCTAGACA ATCATTTCGG CTCCTCGGCG 
GACCGCACCA AGTATCTTGA GTATGCGTTC CAGCGCCTTA AGACCTTCAC ACGGATGCTC 
CAGGCAAGGA GACCCATGTA CAAGGAGTAC TTCCATCGGA ATCCCCAGAT AGAGGCTCGC 
ATGCGGGATG CGAACTTGTT CCGGATCCAG TACCAAACCA GGCGAAACAT GGTGAGCATC 
CTGCGGACCA TTAAGGTGCT GCGGGGGCGG AATGATATCA AGCGCCTGCG CAAGTTTGTG 
GAGGAAGTGA TGGGCAGCTA CGTGGTCATC AAGACGAATC GACTGATGCC CTGGAAGGCG 
GAGTTCATGA ACGAGGTGTA CAACAATCTG GCCCTCAGTT TGTGCGAGGG ATACCGCCTG 
CCGCCCACAC GGGTCACGCC CTACGACAAG AGCGCCATGT GCCAGCTGCT CAACATACCG 
GTGGCCAAGC CGCTGGAGCA CACGGAGCTC ATCTTCGGGG ATCGATCCAC CTACTCCTAT 
GCCGGCGCCG ACAAACAGAG CACCGATCGA TTGGCAGACC AAAACCAAAT CGAGTATCTG 
GAGAAACGAC TTCTATTCGC CCGCCTGCCG ATCGAAAGGA GCTACTTGCT CCATGAGCTG 
GCCGATCGGC ATATGCAGAA GAACCACTTT GTGCAGAGCC TGTCCTACGC CCAGAAGGCC 
ATCGAGGAGG CCAGGGTATG CAATAGCCTG ATCTGGGAGT TTCTCAGCAC CATGCTGATG 
GCCAAGTCAC ACGCGGTGCT CCACAAGTAC GAGCGCCAAA CGGAGGTGCT CAACTCCGCC 
TACGAACTGG CCGCCCAGCT CAAGTCGCCC CAACTGTGCA CCTTCATCGA ACTGTGCCGC 
ATGCTCAACA AGGACTACAT CACGTTGCGC AAGATGTCCC AACTGGTGAC CACCAAACGG 
CTGCGCACCA AAATCTCCAA CAGGTCCAGT TTCCTCAGCT CACCCAACTG TTCGCCCAAC 
TTCTCGGAAT TCAAAAAGGA AGAGTATGGT CATTTGGCCG CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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r-cup cDNA ORF clone, Drosophila melanogaster(fruit fly)

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Related articles in PubMed

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Target ORF information:

ORF Insert Sequence:

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