| Gene Symbol | HDAC11 |
| Entrez Gene ID | 326120 |
| Full Name | Histone deacetylase 11 |
| Synonyms | CG31119,DHDACX,Dmel\CG31119,HDACX,Hdac11,HdacX,dHDAC11,dmHDA403 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Drosophila melanogaster(fruit fly) |
| Genome |
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HDAC11 cDNA ORF clone, Drosophila melanogaster(fruit fly)
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Gene
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Clones
gRNAs
The following HDAC11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HDAC11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID OFa07208 Clone ID Related Accession (Same CDS sequence) NM_170173.3 , NM_001260367.1 Accession Version NM_170173.3 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1556035200000 Organism Drosophila melanogaster(fruit fly) Product histone deacetylase 11, isoform A Comment Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Dec 17, 2009 this sequence version replaced NM_170173.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAGCGCC TGACTGAGCG AGTGCACCAC GAGGAGCAGG AGTCCGAGGA GGTTGTCTGG
GTTAAGCGGG ATGACGCACG CTCCGCCGGC AAACTGCCCA TCGTGTTCTC AAGGAACTAT
GCGGTTCGCT TCGGTGGCCT TGAACGCCTA CATCCCTTCG ATGCGGCCAA GGGCAAGCAC
ATTCACAAGC TCCTGTGCGC CCAACTGCAG CTCGACGACG GCAGCTTCTA CGAACCCACG
GAGCTGACCA AGGACCAGCT GCGTCGTATT CACACAAGGG AATACCTAAA GTCACTGCGC
TGGAGCATGA ATGTGGCCTG CATCGCTGAA GTGCCGCTGA TGGCCTTCGT CCCGAATCGA
TACATTCAGC GTTCCTATTT GCGACCCATG CGCTTTCAAG CAGCCGGTTC CATTTTGGCC
GGTAAGCTGG CATTGGATTA TGGTTGGGCC ATCAACCTGG GCGGTGGGTT CCATCACTGT
TGCTCGTACA GAGGCGGTGG TTTCTGTCCA TATGCTGACA TCTCGCTGCT CATCGTCAGG
CTGTTCGAGC AGGAACCATT CCGGGTGCGC CGCATAATGA TTGTGGACCT GGATGCCCAT
CAGGGCAATG GGCACGAGCG GGACTTCAAT AACGTGGCAG CCGTCTACAT TTTCGACATG
TACAATGCCT TTGTCTATCC GCGGGATCAT GTGGCCAAGG AGAGCATTCG GTGTGCGGTG
GAGCTGCGCA ACTACACGGA GGATGGATTC TACCTGCGGC AACTAAAACG CTGCCTGATG
CAGTCCCTGG CCGAGTTCCG TCCAGATATG GTCGTCTATA ATGCGGGAAC CGATGTGCTC
GAGGGCGATC CATTGGGCAA CCTGGCTATT TCCGCGGAGG GCGTTATTGA GCGGGATCGG
TTGGTATTTA GTACATTTCG GGCATTAGGA ATTCCGGTGG TGATGCTGCT GAGTGGTGGC
TACTTGAAGG CATCCGCAGG GGTAATTACA GATTCGATTG TTAATCTTCG GCTTCAAGGA
TTGCTAAACT AAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_733048.1 CDS 54..1085 Translation 
Target ORF information:
RefSeq Version NM_170173.3 Organism Drosophila melanogaster(fruit fly) Definition Drosophila melanogaster histone deacetylase 11, transcript variant A (HDAC11), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_170173.3
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAGCGCC TGACTGAGCG AGTGCACCAC GAGGAGCAGG AGTCCGAGGA GGTTGTCTGG
GTTAAGCGGG ATGACGCACG CTCCGCCGGC AAACTGCCCA TCGTGTTCTC AAGGAACTAT
GCGGTTCGCT TCGGTGGCCT TGAACGCCTA CATCCCTTCG ATGCGGCCAA GGGCAAGCAC
ATTCACAAGC TCCTGTGCGC CCAACTGCAG CTCGACGACG GCAGCTTCTA CGAACCCACG
GAGCTGACCA AGGACCAGCT GCGTCGTATT CACACAAGGG AATACCTAAA GTCACTGCGC
TGGAGCATGA ATGTGGCCTG CATCGCTGAA GTGCCGCTGA TGGCCTTCGT CCCGAATCGA
TACATTCAGC GTTCCTATTT GCGACCCATG CGCTTTCAAG CAGCCGGTTC CATTTTGGCC
GGTAAGCTGG CATTGGATTA TGGTTGGGCC ATCAACCTGG GCGGTGGGTT CCATCACTGT
TGCTCGTACA GAGGCGGTGG TTTCTGTCCA TATGCTGACA TCTCGCTGCT CATCGTCAGG
CTGTTCGAGC AGGAACCATT CCGGGTGCGC CGCATAATGA TTGTGGACCT GGATGCCCAT
CAGGGCAATG GGCACGAGCG GGACTTCAAT AACGTGGCAG CCGTCTACAT TTTCGACATG
TACAATGCCT TTGTCTATCC GCGGGATCAT GTGGCCAAGG AGAGCATTCG GTGTGCGGTG
GAGCTGCGCA ACTACACGGA GGATGGATTC TACCTGCGGC AACTAAAACG CTGCCTGATG
CAGTCCCTGG CCGAGTTCCG TCCAGATATG GTCGTCTATA ATGCGGGAAC CGATGTGCTC
GAGGGCGATC CATTGGGCAA CCTGGCTATT TCCGCGGAGG GCGTTATTGA GCGGGATCGG
TTGGTATTTA GTACATTTCG GGCATTAGGA ATTCCGGTGG TGATGCTGCT GAGTGGTGGC
TACTTGAAGG CATCCGCAGG GGTAATTACA GATTCGATTG TTAATCTTCG GCTTCAAGGA
TTGCTAAACT AAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID OFa07208 Clone ID Related Accession (Same CDS sequence) NM_170173.3 , NM_001260367.1 Accession Version NM_001260367.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1032bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1556035200000 Organism Drosophila melanogaster(fruit fly) Product histone deacetylase 11, isoform B Comment Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAGCGCC TGACTGAGCG AGTGCACCAC GAGGAGCAGG AGTCCGAGGA GGTTGTCTGG
GTTAAGCGGG ATGACGCACG CTCCGCCGGC AAACTGCCCA TCGTGTTCTC AAGGAACTAT
GCGGTTCGCT TCGGTGGCCT TGAACGCCTA CATCCCTTCG ATGCGGCCAA GGGCAAGCAC
ATTCACAAGC TCCTGTGCGC CCAACTGCAG CTCGACGACG GCAGCTTCTA CGAACCCACG
GAGCTGACCA AGGACCAGCT GCGTCGTATT CACACAAGGG AATACCTAAA GTCACTGCGC
TGGAGCATGA ATGTGGCCTG CATCGCTGAA GTGCCGCTGA TGGCCTTCGT CCCGAATCGA
TACATTCAGC GTTCCTATTT GCGACCCATG CGCTTTCAAG CAGCCGGTTC CATTTTGGCC
GGTAAGCTGG CATTGGATTA TGGTTGGGCC ATCAACCTGG GCGGTGGGTT CCATCACTGT
TGCTCGTACA GAGGCGGTGG TTTCTGTCCA TATGCTGACA TCTCGCTGCT CATCGTCAGG
CTGTTCGAGC AGGAACCATT CCGGGTGCGC CGCATAATGA TTGTGGACCT GGATGCCCAT
CAGGGCAATG GGCACGAGCG GGACTTCAAT AACGTGGCAG CCGTCTACAT TTTCGACATG
TACAATGCCT TTGTCTATCC GCGGGATCAT GTGGCCAAGG AGAGCATTCG GTGTGCGGTG
GAGCTGCGCA ACTACACGGA GGATGGATTC TACCTGCGGC AACTAAAACG CTGCCTGATG
CAGTCCCTGG CCGAGTTCCG TCCAGATATG GTCGTCTATA ATGCGGGAAC CGATGTGCTC
GAGGGCGATC CATTGGGCAA CCTGGCTATT TCCGCGGAGG GCGTTATTGA GCGGGATCGG
TTGGTATTTA GTACATTTCG GGCATTAGGA ATTCCGGTGG TGATGCTGCT GAGTGGTGGC
TACTTGAAGG CATCCGCAGG GGTAATTACA GATTCGATTG TTAATCTTCG GCTTCAAGGA
TTGCTAAACT AAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001247296.1 CDS 54..1085 Translation
Target ORF information:
RefSeq Version NM_001260367.1 Organism Drosophila melanogaster(fruit fly) Definition Drosophila melanogaster histone deacetylase 11, transcript variant B (HDAC11), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK NM_001260367.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAGCGCC TGACTGAGCG AGTGCACCAC GAGGAGCAGG AGTCCGAGGA GGTTGTCTGG
GTTAAGCGGG ATGACGCACG CTCCGCCGGC AAACTGCCCA TCGTGTTCTC AAGGAACTAT
GCGGTTCGCT TCGGTGGCCT TGAACGCCTA CATCCCTTCG ATGCGGCCAA GGGCAAGCAC
ATTCACAAGC TCCTGTGCGC CCAACTGCAG CTCGACGACG GCAGCTTCTA CGAACCCACG
GAGCTGACCA AGGACCAGCT GCGTCGTATT CACACAAGGG AATACCTAAA GTCACTGCGC
TGGAGCATGA ATGTGGCCTG CATCGCTGAA GTGCCGCTGA TGGCCTTCGT CCCGAATCGA
TACATTCAGC GTTCCTATTT GCGACCCATG CGCTTTCAAG CAGCCGGTTC CATTTTGGCC
GGTAAGCTGG CATTGGATTA TGGTTGGGCC ATCAACCTGG GCGGTGGGTT CCATCACTGT
TGCTCGTACA GAGGCGGTGG TTTCTGTCCA TATGCTGACA TCTCGCTGCT CATCGTCAGG
CTGTTCGAGC AGGAACCATT CCGGGTGCGC CGCATAATGA TTGTGGACCT GGATGCCCAT
CAGGGCAATG GGCACGAGCG GGACTTCAAT AACGTGGCAG CCGTCTACAT TTTCGACATG
TACAATGCCT TTGTCTATCC GCGGGATCAT GTGGCCAAGG AGAGCATTCG GTGTGCGGTG
GAGCTGCGCA ACTACACGGA GGATGGATTC TACCTGCGGC AACTAAAACG CTGCCTGATG
CAGTCCCTGG CCGAGTTCCG TCCAGATATG GTCGTCTATA ATGCGGGAAC CGATGTGCTC
GAGGGCGATC CATTGGGCAA CCTGGCTATT TCCGCGGAGG GCGTTATTGA GCGGGATCGG
TTGGTATTTA GTACATTTCG GGCATTAGGA ATTCCGGTGG TGATGCTGCT GAGTGGTGGC
TACTTGAAGG CATCCGCAGG GGTAATTACA GATTCGATTG TTAATCTTCG GCTTCAAGGA
TTGCTAAACT AAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH
Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D
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