| Gene Symbol | vps16 |
| Entrez Gene ID | 798985 |
| Full Name | vacuolar protein sorting protein 16 |
| Synonyms | im:6907749,wu:fc34a07,wu:fl62a06,zgc:162584 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
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vps16 cDNA ORF clone, Danio rerio(zebrafish)
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Gene
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Clones
gRNAs
The following vps16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the vps16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ODa35919 Clone ID Related Accession (Same CDS sequence) NM_001098189.1 Accession Version NM_001098189.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 2508bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1554566400000 Organism Danio rerio(zebrafish) Product vacuolar protein sorting-associated protein 16 homolog Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC139870.1. On May 23, 2007 this sequence version replaced XM_001335326.1. ##Evidence-Data-START## Transcript exon combination :: BC139870.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461ATGGCGTTTG TTACAGCGAA CTGGAACCCT CTGGGCGAGG CTTTTTACAG AAAGATTGAA
TTGTATGAGA TGGCCTGGAA ACTCAAAGAC GGTCTGAAAG ATTGTCTGTT TGCTGCAGCT
CCATACGGGG GTCCCATTGC TCTCCTAAAA TGGCACAACC GACGTTCTCC CAGTGCCAGA
CCACAGTTAG AGATCTACTC TTCTTCAGGA CTCCCTCTGG CCAGCTTTCC ATGGAAGAGT
GGTGTGGTGA AGCAGTTGGG ATGGACGGTG TCTGACGACC TACTGTGTGT TCAGGAGGAC
GGCACTGTGC TCGTCTATGA TCTCTTGGGC GGCTTCAAGA GACACTTCAG CATGGGCAAT
GAAGTTTCTC AGAGTCAGGT GCTGGAGACC AAGATTTTTC ATTCACCCTA TGGCACAGGG
GTTGCCATAT TGACAGGTGC CTTGCGGTTC ACTTTGGCCA CAAACATTGA TGACATCAAA
CTGAGGAGGC TACCTGAGGT TCCAGGTATC CAGGCAGCGC CATCATGTTG GGCAGTGCTG
ACTCAGGACC GACAAAGTAA AGTCCTGGTG GCCAGTGGTG CTCATCTGTT CATCTTGGAC
AATACAGCCT GCACTCCTGT GACTCCTCCA GGCCTCTCTC CACAAGCGTC CAGTATACTT
CACATGTGTG TCTCATTCAG TTATAAATAT CTTGCACTCC TCACCGACTC TGGCCATGTG
TGGATGGGCA CATCCAATCT AAAGGAGAAA CTCAGTGAGG TCGAAACCAA AATCAAAACA
CCCCCCAGAC AGATGGCATG GTGTCGCAGG CCCAAGAGTC AGGAGCCTTC GGCAGTGGTC
ATGTGGGACG GGCTTCTCCT GGTGGTCGGA GAGTGTAAAG AAACGATTCA GTATCAACTG
GATGATGATT CAATCCTGGT CCCGGAGCTA GATGGGGTTC GGATCATTAG TGGAACACAC
CATGAGCTTT TGCAAGAGGT CCCAGGTGCT TGTGAGGAGA TATTTAAAAT TGCCTCAATG
GCTCCTGGAG CTTTACTGCT GGAGGCACAT AAAGAATATG AGAAAGAGAG TCAGAAGGCA
GACGAGTATC TGAGAGAGAT TAAAGAGCAG AGTCTGCTGA GCGAAGCGGT ACAACAGTGT
GTGGAAGCCG CCGGGCATGA ACATGAACCC GAGACACAGA AAACACTCTT GAGGGCGGCT
TCGTTTGGGA AGTGTTTCTT GAGTAATTTT CCTCCGGAGC AGTTCGTCAG TATGTGCCGA
GACCTGCGAG TGTTGAATGC TGTTCGAGAT TATACCATAG GCATTCCTCT GACCCACACT
CAGTTCAAGC AGATGACCGT ACAGGTGCTC ATCGACAGAT TGGTTTATCG TAAACTCTAT
CCACTGGCTA TTGAGGTTTG CAGATATCTG AAGACTCCGG AATATCAGGG AGTAAGTCGT
GTGCTCAAAC ACTGGGCCTG CTTCAAGGTC CAGCAGAAGG AGGAATCTGA TGAAGTCATT
GCAAAAGCTG TGAGTGTGAA GCTCGCCGAT GCTGCTGGAA TCTCCTACTC TGAAATCGCC
ACCAAAGCAT ACGAGAGCGG ACGAACGGAG CTCGCCATTA AGCTGTTGGA GTTTGAGCCT
CGCTCTGGTG AACAGGTCCC ACTGCTGCTG AAAATGAAGA AAAGTCCTCT GGCTTTGAGC
AAAGCCATTG AGAGTGGCGA CACAGACCTC GTGTACACCG TGGTGATGTA CCTGAAGAAT
GAGCTAAACA GAGGAGACTT CTTCATGATG TTGAGGAACC AACCTGTGGC TCTGAGCCTC
TACAGACAGT TTTGTAAACA TCAGGAGCAG GATACGCTGA AAGATCTTTT CAATCAAGAT
GACGATCACG AGGAACTGGG CAATTTCTAC GTAAAAGCCA GCTATAAAGA GCAGAGACTG
GAAGCACGGA TTGCTCTTTT ACAAAGTGCC GTGGACGAGT ACTACAAGGC CAAGAATGAG
TTTTCTGCCA AGAGCACAGA AGACGAGATG CGTCTGCTGC GGTTTCAGAG GAAGCTGGAG
GAAGAGAAGG GCGAGCCTCT TGTGGGCTTT TCTCTTCATG ACACTATGAC CACACTGCTG
TCTGTGGGAC TGCACAAACA CGCAGAACAG CTTTACAAAG ACTTCAGAGT GCCTGATAAG
AGGTTCTGGT GGCTAAAGTT GAAGGCTCTT GCTGAGAAGG AGGACTGGGA CGAGCTGGAG
AAATTTGCCA AAAGCAAAAA GTCTCCTATT GGATATCTGC CATTCGTAGA TGTGTGTATT
AAACATCATA ACAAATATGA AGCCAGGAAA TATGTGTCTA AAGTCACACC CGAGCAGAAG
GTCAAAGCTC ACCTCGCAGT GGGGGACATG GAAGGTGCTG CAGAGGCTGC TATCGAGAGG
CGTAATGACA CTGAGATCAG CACAGTTCTC TCACGCTGTT CATCGACCAC TGATCATGCT
CTTGTGGAAC GCCTGAACCG AGCCAGAGCC ACGGCTACCA AAAAGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_001091659.1 CDS 130..2637 Translation 
Target ORF information:
RefSeq Version NM_001098189.1 Organism Danio rerio(zebrafish) Definition Danio rerio vacuolar protein sorting 16 homolog (vps16), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_001098189.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461ATGGCGTTTG TTACAGCGAA CTGGAACCCT CTGGGCGAGG CTTTTTACAG AAAGATTGAA
TTGTATGAGA TGGCCTGGAA ACTCAAAGAC GGTCTGAAAG ATTGTCTGTT TGCTGCAGCT
CCATACGGGG GTCCCATTGC TCTCCTAAAA TGGCACAACC GACGTTCTCC CAGTGCCAGA
CCACAGTTAG AGATCTACTC TTCTTCAGGA CTCCCTCTGG CCAGCTTTCC ATGGAAGAGT
GGTGTGGTGA AGCAGTTGGG ATGGACGGTG TCTGACGACC TACTGTGTGT TCAGGAGGAC
GGCACTGTGC TCGTCTATGA TCTCTTGGGC GGCTTCAAGA GACACTTCAG CATGGGCAAT
GAAGTTTCTC AGAGTCAGGT GCTGGAGACC AAGATTTTTC ATTCACCCTA TGGCACAGGG
GTTGCCATAT TGACAGGTGC CTTGCGGTTC ACTTTGGCCA CAAACATTGA TGACATCAAA
CTGAGGAGGC TACCTGAGGT TCCAGGTATC CAGGCAGCGC CATCATGTTG GGCAGTGCTG
ACTCAGGACC GACAAAGTAA AGTCCTGGTG GCCAGTGGTG CTCATCTGTT CATCTTGGAC
AATACAGCCT GCACTCCTGT GACTCCTCCA GGCCTCTCTC CACAAGCGTC CAGTATACTT
CACATGTGTG TCTCATTCAG TTATAAATAT CTTGCACTCC TCACCGACTC TGGCCATGTG
TGGATGGGCA CATCCAATCT AAAGGAGAAA CTCAGTGAGG TCGAAACCAA AATCAAAACA
CCCCCCAGAC AGATGGCATG GTGTCGCAGG CCCAAGAGTC AGGAGCCTTC GGCAGTGGTC
ATGTGGGACG GGCTTCTCCT GGTGGTCGGA GAGTGTAAAG AAACGATTCA GTATCAACTG
GATGATGATT CAATCCTGGT CCCGGAGCTA GATGGGGTTC GGATCATTAG TGGAACACAC
CATGAGCTTT TGCAAGAGGT CCCAGGTGCT TGTGAGGAGA TATTTAAAAT TGCCTCAATG
GCTCCTGGAG CTTTACTGCT GGAGGCACAT AAAGAATATG AGAAAGAGAG TCAGAAGGCA
GACGAGTATC TGAGAGAGAT TAAAGAGCAG AGTCTGCTGA GCGAAGCGGT ACAACAGTGT
GTGGAAGCCG CCGGGCATGA ACATGAACCC GAGACACAGA AAACACTCTT GAGGGCGGCT
TCGTTTGGGA AGTGTTTCTT GAGTAATTTT CCTCCGGAGC AGTTCGTCAG TATGTGCCGA
GACCTGCGAG TGTTGAATGC TGTTCGAGAT TATACCATAG GCATTCCTCT GACCCACACT
CAGTTCAAGC AGATGACCGT ACAGGTGCTC ATCGACAGAT TGGTTTATCG TAAACTCTAT
CCACTGGCTA TTGAGGTTTG CAGATATCTG AAGACTCCGG AATATCAGGG AGTAAGTCGT
GTGCTCAAAC ACTGGGCCTG CTTCAAGGTC CAGCAGAAGG AGGAATCTGA TGAAGTCATT
GCAAAAGCTG TGAGTGTGAA GCTCGCCGAT GCTGCTGGAA TCTCCTACTC TGAAATCGCC
ACCAAAGCAT ACGAGAGCGG ACGAACGGAG CTCGCCATTA AGCTGTTGGA GTTTGAGCCT
CGCTCTGGTG AACAGGTCCC ACTGCTGCTG AAAATGAAGA AAAGTCCTCT GGCTTTGAGC
AAAGCCATTG AGAGTGGCGA CACAGACCTC GTGTACACCG TGGTGATGTA CCTGAAGAAT
GAGCTAAACA GAGGAGACTT CTTCATGATG TTGAGGAACC AACCTGTGGC TCTGAGCCTC
TACAGACAGT TTTGTAAACA TCAGGAGCAG GATACGCTGA AAGATCTTTT CAATCAAGAT
GACGATCACG AGGAACTGGG CAATTTCTAC GTAAAAGCCA GCTATAAAGA GCAGAGACTG
GAAGCACGGA TTGCTCTTTT ACAAAGTGCC GTGGACGAGT ACTACAAGGC CAAGAATGAG
TTTTCTGCCA AGAGCACAGA AGACGAGATG CGTCTGCTGC GGTTTCAGAG GAAGCTGGAG
GAAGAGAAGG GCGAGCCTCT TGTGGGCTTT TCTCTTCATG ACACTATGAC CACACTGCTG
TCTGTGGGAC TGCACAAACA CGCAGAACAG CTTTACAAAG ACTTCAGAGT GCCTGATAAG
AGGTTCTGGT GGCTAAAGTT GAAGGCTCTT GCTGAGAAGG AGGACTGGGA CGAGCTGGAG
AAATTTGCCA AAAGCAAAAA GTCTCCTATT GGATATCTGC CATTCGTAGA TGTGTGTATT
AAACATCATA ACAAATATGA AGCCAGGAAA TATGTGTCTA AAGTCACACC CGAGCAGAAG
GTCAAAGCTC ACCTCGCAGT GGGGGACATG GAAGGTGCTG CAGAGGCTGC TATCGAGAGG
CGTAATGACA CTGAGATCAG CACAGTTCTC TCACGCTGTT CATCGACCAC TGATCATGCT
CTTGTGGAAC GCCTGAACCG AGCCAGAGCC ACGGCTACCA AAAAGTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG
Genetic characterization and in vivo image analysis of novel zebrafish Danio rerio pigment mutants.
Journal of fish biology82(5)1671-83(2013 May)
Hsu CC,Pai WY,Lai CY,Lu MW,Her GM
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