prph2a cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	prph2a
Entrez Gene ID	58085
Full Name	peripherin 2a (retinal degeneration, slow)
Synonyms	rds2,zgc:92295
General protein information	Preferred Names peripherin 2a (retinal degeneration, slow) Names peripherin-2 retinal degradation slow 2
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_131566.1	NP_571641.1	peripherin-2

Pathways from BioSystems

Homologies

Mus musculus (house mouse)	Prph2	NP_032964.1
Rattus norvegicus (Norway rat)	Prph2	NP_037153.1
Macaca mulatta (Rhesus monkey)	PRPH2	XP_001088507.1
Pan troglodytes (chimpanzee)	PRPH2	XP_001134673.1
Gallus gallus (chicken)	PRPH2	NP_990369.1
Homo sapiens (human)	PRPH2	NP_000313.2
Danio rerio (zebrafish)	prph2a	NP_571641.1
Danio rerio (zebrafish)	prph2b	NP_571642.1
Xenopus tropicalis (tropical clawed frog)	prph2	XP_002934729.1
Canis lupus familiaris (dog)	PRPH2	NP_001003289.1
Bos taurus (cattle)	PRPH2	NP_001159959.1

Gene Ontology
Bibliography

Related articles in PubMed

Functional roles of eriocalyxin B in zebrafish revealed by transcriptome analysis.
Zhou X, Cao CY, Wan AT, Yue GG, Kwok FH, Fung KP, Sun H, Lau CB, Puno PT, Tsui SK
Molecular omics14(3)156-169(2018 Jun)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Demonstration of the Coexistence of Duplicated LH Receptors in Teleosts, and Their Origin in Ancestral Actinopterygians.
Maugars G, Dufour S
PloS one10(8)e0135184(2015)

Quantitative genetic analysis of retinal degeneration in the blind cavefish Astyanax mexicanus.
O'Quin KE, Yoshizawa M, Doshi P, Jeffery WR
PloS one8(2)e57281(2013)

Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates.
Kassahn KS, Dang VT, Wilkins SJ, Perkins AC, Ragan MA
Genome research19(8)1404-18(2009 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following prph2a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prph2a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa33381	NM_131566.1 Latest version!	Danio rerio peripherin 2a (retinal degeneration, slow) (prph2a), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

prph2a ( NM_131566.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_571641.1 Danio rerio peripherin 2a (retinal degeneration, slow) (prph2a), mRNA.

Price & Availability↑

CloneID	ODa33381
Clone ID Related Accession (Same CDS sequence)	NM_131566.1
Accession Version	NM_131566.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1038bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1545408000000
Organism	Danio rerio(zebrafish)
Product	peripherin-2
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC081641.1. ##Evidence-Data-START## Transcript exon combination :: BC081641.1, EG587510.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END##

ATGGCTCTCA TGAAGGTAAA GTTTGACCTG AAGAAAAGGG TAAAGCTTGC CCAGATGCTA 
TGGCTCATGT ACTGGTTTTC CGTAATGGCA GGAGTGCTGG TCTTCAGCAT GGGCCTTTTC 
TTTAAAATCG AACTCCGCAA AAGAAGTGAA CTTATGGACA ACAACGAAAG CCATTTTGTA 
CCCAACATTC TAATCGGTGT GGGACTTTTG GCATGTTGTC TAAATGCCTT TGGTGGCAAA 
GTCTGCTACG ACTCGCTCGA CTCCTCCAAG TATGCGAAAT GGAAGTCTAT TATGACGCCC 
TTTCTCATTT GTTGTTTGGT CTTCAACTTC CTCCTTATTG TCACCGCGGC TATGTGTTTC 
GCCATGCGCA TTCCTCTAGA GTTTACACTT GCGGAGGGCC TGAAAAATGG GATGAAGTAC 
TACAAGGACA CCGATACACC CGGGCGCTGC TACATGAAGA GGACTCTGGA TCTCATGCAG 
ATGGAGTTCC GATGCTGTGG CAACAACAAT TACAAAGACT GGTTCGAGAT CCAGTGGGTG 
AGCAACCGTT ACCTGGACTT CAGCGCCAAA GAAGTCAAAG ACCGAATCAG CAGCAATGTG 
GATGGCAAAT ACCTAATGGA TGGCGTTCCC TTCAGCTGCT GCAATCCTAG CTCACCACGA 
CCCTGCATCC AACAGCAAAT AACCAACAAC TCAGCTCACT ATAGCTATGA CCACTACACC 
GAAGACCTAA ACATCTGGAA ACGAGGCTGT CGGGACGCTC TCGTCTCCTA CTATGGTGGA 
ATGATGAACA CTATTGGGGT GCTTGTGCTG TTGGTCACCC TCCTGCAAAG CGCTGTAATG 
ATTGGACTTC AGTACATAAA CACCTCTCTG TCCACACTGG TCAACCCAGA AGACCCCGAG 
AGCGAGAGCG AGGGCTGGAT CCTGGAGAAA ACGGTTAAAG AGACCTTCAC TGACATCATG 
GCTAAGATGA AGGCCATGGG CAAAGGCAAT CAGGTGGATG AGGGGACGAA TGAAGAGGCT 
GCTGCCACTG CCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_571641.1
CDS	257..1294
Translation	MALMKVKFDLKKRVKLAQMLWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPNILIGVGLLACCLNAFGGKVCYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIPLEFTLAEGLKNGMKYYKDTDTPGRCYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDRISSNVDGKYLMDGVPFSCCNPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGCRDALVSYYGGMMNTIGVLVLLVTLLQSAVMIGLQYINTSLSTLVNPEDPESESEGWILEKTVKETFTDIMAKMKAMGKGNQVDEGTNEEAAATAS

Target ORF information:

RefSeq Version	NM_131566.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio peripherin 2a (retinal degeneration, slow) (prph2a), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_131566.1

ORF Insert Sequence:

ATGGCTCTCA TGAAGGTAAA GTTTGACCTG AAGAAAAGGG TAAAGCTTGC CCAGATGCTA 
TGGCTCATGT ACTGGTTTTC CGTAATGGCA GGAGTGCTGG TCTTCAGCAT GGGCCTTTTC 
TTTAAAATCG AACTCCGCAA AAGAAGTGAA CTTATGGACA ACAACGAAAG CCATTTTGTA 
CCCAACATTC TAATCGGTGT GGGACTTTTG GCATGTTGTC TAAATGCCTT TGGTGGCAAA 
GTCTGCTACG ACTCGCTCGA CTCCTCCAAG TATGCGAAAT GGAAGTCTAT TATGACGCCC 
TTTCTCATTT GTTGTTTGGT CTTCAACTTC CTCCTTATTG TCACCGCGGC TATGTGTTTC 
GCCATGCGCA TTCCTCTAGA GTTTACACTT GCGGAGGGCC TGAAAAATGG GATGAAGTAC 
TACAAGGACA CCGATACACC CGGGCGCTGC TACATGAAGA GGACTCTGGA TCTCATGCAG 
ATGGAGTTCC GATGCTGTGG CAACAACAAT TACAAAGACT GGTTCGAGAT CCAGTGGGTG 
AGCAACCGTT ACCTGGACTT CAGCGCCAAA GAAGTCAAAG ACCGAATCAG CAGCAATGTG 
GATGGCAAAT ACCTAATGGA TGGCGTTCCC TTCAGCTGCT GCAATCCTAG CTCACCACGA 
CCCTGCATCC AACAGCAAAT AACCAACAAC TCAGCTCACT ATAGCTATGA CCACTACACC 
GAAGACCTAA ACATCTGGAA ACGAGGCTGT CGGGACGCTC TCGTCTCCTA CTATGGTGGA 
ATGATGAACA CTATTGGGGT GCTTGTGCTG TTGGTCACCC TCCTGCAAAG CGCTGTAATG 
ATTGGACTTC AGTACATAAA CACCTCTCTG TCCACACTGG TCAACCCAGA AGACCCCGAG 
AGCGAGAGCG AGGGCTGGAT CCTGGAGAAA ACGGTTAAAG AGACCTTCAC TGACATCATG 
GCTAAGATGA AGGCCATGGG CAAAGGCAAT CAGGTGGATG AGGGGACGAA TGAAGAGGCT 
GCTGCCACTG CCAGCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Functional roles of eriocalyxin B in zebrafish revealed by transcriptome analysis.
Molecular omics14(3)156-169(2018 Jun)
Zhou X,Cao CY,Wan AT,Yue GG,Kwok FH,Fung KP,Sun H,Lau CB,Puno PT,Tsui SK

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Demonstration of the Coexistence of Duplicated LH Receptors in Teleosts, and Their Origin in Ancestral Actinopterygians.
PloS one10(8)e0135184(2015)
Maugars G,Dufour S

Quantitative genetic analysis of retinal degeneration in the blind cavefish Astyanax mexicanus.
PloS one8(2)e57281(2013)
O'Quin KE,Yoshizawa M,Doshi P,Jeffery WR

Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates.
Genome research19(8)1404-18(2009 Aug)
Kassahn KS,Dang VT,Wilkins SJ,Perkins AC,Ragan MA