colec12 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	colec12
Entrez Gene ID	558942
Full Name	collectin sub-family member 12
Synonyms	hm:zeh0853,id:ibd2826,sb:cb377,si:ch211-212m21.5
General protein information	Preferred Names collectin sub-family member 12 Names collectin-12 cb377 zCL-P1 zeh0853
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005163457.3	XP_005163514.1	collectin-12 isoform X1
XM_005163457.4	XP_005163514.1	collectin-12 isoform X1
NM_001122840.1	NP_001116312.1	collectin-12

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	COLEC12	XP_005623081.1
Bos taurus (cattle)	COLEC12	NP_001095313.1
Pan troglodytes (chimpanzee)	COLEC12	XP_524004.3
Macaca mulatta (Rhesus monkey)	COLEC12	XP_001088438.2
Rattus norvegicus (Norway rat)	Colec12	NP_001020892.1
Gallus gallus (chicken)	COLEC12	NP_001034688.1
Danio rerio (zebrafish)	colec12	NP_001116312.1
Xenopus tropicalis (tropical clawed frog)	colec12	XP_002934169.1
Mus musculus (house mouse)	Colec12	NP_569716.2
Homo sapiens (human)	COLEC12	NP_569057.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Molecular cloning and functional analysis of scavenger receptor zebrafish CL-P1.
Fukuda M, Ohtani K, Jang SJ, Yoshizaki T, Mori K, Motomura W, Yoshida I, Suzuki Y, Kohgo Y, Wakamiya N
Biochimica et biophysica acta1810(12)1150-9(2011 Dec)

A gene expression screen in zebrafish embryogenesis.
Kudoh T, Tsang M, Hukriede NA, Chen X, Dedekian M, Clarke CJ, Kiang A, Schultz S, Epstein JA, Toyama R, Dawid IB
Genome research11(12)1979-87(2001 Dec)

Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library.
Ton C, Hwang DM, Dempsey AA, Tang HC, Yoon J, Lim M, Mably JD, Fishman MC, Liew CC
Genome research10(12)1915-27(2000 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following colec12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the colec12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa00047	NM_001122840.1 Latest version!	Danio rerio collectin sub-family member 12 (colec12), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
ODa07112	XM_005163457.4 Latest version!	Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
View Old Accession Versions >>
ODa07112	XM_005163457.3	Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00
Hide Old Accession Versions >>

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

colec12 ( NM_001122840.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001116312.1 Danio rerio collectin sub-family member 12 (colec12), mRNA.

Price & Availability↑

CloneID	ODa00047
Clone ID Related Accession (Same CDS sequence)	NM_001122840.1
Accession Version	NM_001122840.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2163bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1571673600000
Organism	Danio rerio(zebrafish)
Product	collectin-12
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX927088.11. On Mar 28, 2008 this sequence version replaced XR_029670.1. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001116312.1
CDS	443..2605
Translation	MKDDFNDEEEVQSFGYKRFGIQEGNECTKCKNDWALRVAIALLYVLCALLTIAVAVLGYKVVQRMDNVTEGMQNYGGKITAVETDLKKLDDQTGEKSENATSELHSFKLEFQTLQKQLSDVIVKTSNNRAVLKELQLAGEDMQSGHLSLRDLLESNANVISKVNHTLNTYNSLIDGLKTETARLQSDLHVQTSEQGQNSHSISTLNFTQTQQRNLISSLQRSVEDTGQAVQKLKNDYQSLQQVARQTKADADWLREKVQNLQALAANNSLLTRSNSDSLEDVTSQLTTLSEQVQNTSTITDSHDQSLRELMDQQRDHDNATSIRFDALEARLDSNEGEMDRITGNVSFTTQLLRAISTDLNGLRTCSETVTRHSELLHGLNNSVAETRAESTELKAQQEELAVRLDKEVSSLSIVMDEMKLVDNKHSQLITNFTILQGPPGPRGPRGDKGSMGLPGKTGPKGEKGEKGAPGDAGPKGEKGPAGPPGVPGLKGPPGSRGSPGPKGSRGSGGRQGPSGEKGDPGIPGMPGRDGQPGPTGPQGPQGLRGPAGPAGLEGARGPVGPIGPPGPPGLPGLPAPPIVVPPVDPQGFVNRQVAPPPTTTPGCPPQWKGFREQCYHFSAPMESLNFDEAKERCSNLSSSMLIINDEEEQLWIKRQISGKGYFWLGLKWKPGQPDNWSHGHEAGEDCAGLIHEASWNDFFCTERIGFICERTNESKVPVL

Target ORF information:

RefSeq Version	NM_001122840.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio collectin sub-family member 12 (colec12), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001122840.1

ORF Insert Sequence:

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

colec12 ( XM_005163457.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005163514.1 Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa07112
Clone ID Related Accession (Same CDS sequence)	XM_005163457.3 , XM_005163457.4
Accession Version	XM_005163457.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2223bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	collectin-12 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.6) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005163457.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT TACAGACAGC GCAGAGGAAA ACATCTGGAG ATGGGTGGAT 
GGGAGCCTGC CTAACTATAC AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005163514.1
CDS	477..2699
Translation	MKDDFNDEEEVQSFGYKRFGIQEGNECTKCKNDWALRVAIALLYVLCALLTIAVAVLGYKVVQRMDNVTEGMQNYGGKITAVETDLKKLDDQTGEKSENATSELHSFKLEFQTLQKQLSDVIVKTSNNRAVLKELQLAGEDMQSGHLSLRDLLESNANVISKVNHTLNTYNSLIDGLKTETARLQSDLHVQTSEQGQNSHSISTLNFTQTQQRNLISSLQRSVEDTGQAVQKLKNDYQSLQQVARQTKADADWLREKVQNLQALAANNSLLTRSNSDSLEDVTSQLTTLSEQVQNTSTITDSHDQSLRELMDQQRDHDNATSIRFDALEARLDSNEGEMDRITGNVSFTTQLLRAISTDLNGLRTCSETVTRHSELLHGLNNSVAETRAESTELKAQQEELAVRLDKEVSSLSIVMDEMKLVDNKHSQLITNFTILQGPPGPRGPRGDKGSMGLPGKTGPKGEKGEKGAPGDAGPKGEKGPAGPPGVPGLKGPPGSRGSPGPKGSRGSGGRQGPSGEKGDPGIPGMPGRDGQPGPTGPQGPQGLRGPAGPAGLEGARGPVGPIGPPGPPGLPGLPAPPIVVPPVDPQGFVNRQVAPPPTTTPGCPPQWKGFREQCYHFSAPMESLNFDEAKERCSNLSSSMLIINDEEEQLWIKRQISGKGYFWLGLTDSAEENIWRWVDGSLPNYTKWKPGQPDNWSHGHEAGEDCAGLIHEASWNDFFCTERIGFICERTNESKVPVL

Target ORF information:

RefSeq Version	XM_005163457.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005163457.3

ORF Insert Sequence:

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT TACAGACAGC GCAGAGGAAA ACATCTGGAG ATGGGTGGAT 
GGGAGCCTGC CTAACTATAC AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

colec12 ( XM_005163457.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005163514.1 Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.

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CloneID	ODa07112
Clone ID Related Accession (Same CDS sequence)	XM_005163457.3 , XM_005163457.4
Accession Version	XM_005163457.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2223bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	collectin-12 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007113.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005163457.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT TACAGACAGC GCAGAGGAAA ACATCTGGAG ATGGGTGGAT 
GGGAGCCTGC CTAACTATAC AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005163514.1
CDS	473..2695
Translation	MKDDFNDEEEVQSFGYKRFGIQEGNECTKCKNDWALRVAIALLYVLCALLTIAVAVLGYKVVQRMDNVTEGMQNYGGKITAVETDLKKLDDQTGEKSENATSELHSFKLEFQTLQKQLSDVIVKTSNNRAVLKELQLAGEDMQSGHLSLRDLLESNANVISKVNHTLNTYNSLIDGLKTETARLQSDLHVQTSEQGQNSHSISTLNFTQTQQRNLISSLQRSVEDTGQAVQKLKNDYQSLQQVARQTKADADWLREKVQNLQALAANNSLLTRSNSDSLEDVTSQLTTLSEQVQNTSTITDSHDQSLRELMDQQRDHDNATSIRFDALEARLDSNEGEMDRITGNVSFTTQLLRAISTDLNGLRTCSETVTRHSELLHGLNNSVAETRAESTELKAQQEELAVRLDKEVSSLSIVMDEMKLVDNKHSQLITNFTILQGPPGPRGPRGDKGSMGLPGKTGPKGEKGEKGAPGDAGPKGEKGPAGPPGVPGLKGPPGSRGSPGPKGSRGSGGRQGPSGEKGDPGIPGMPGRDGQPGPTGPQGPQGLRGPAGPAGLEGARGPVGPIGPPGPPGLPGLPAPPIVVPPVDPQGFVNRQVAPPPTTTPGCPPQWKGFREQCYHFSAPMESLNFDEAKERCSNLSSSMLIINDEEEQLWIKRQISGKGYFWLGLTDSAEENIWRWVDGSLPNYTKWKPGQPDNWSHGHEAGEDCAGLIHEASWNDFFCTERIGFICERTNESKVPVL

Target ORF information:

RefSeq Version	XM_005163457.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio collectin sub-family member 12 (colec12), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005163457.4

ORF Insert Sequence:

ATGAAGGACG ACTTCAATGA TGAAGAAGAA GTGCAGTCAT TTGGCTACAA AAGGTTTGGT 
ATCCAGGAAG GAAATGAATG CACTAAATGT AAAAACGACT GGGCCCTGAG GGTGGCGATT 
GCACTTCTGT ATGTGCTTTG TGCACTGCTC ACCATAGCTG TGGCTGTGCT GGGATACAAA 
GTGGTCCAGA GGATGGATAA TGTAACAGAG GGTATGCAAA ATTATGGAGG GAAAATCACG 
GCTGTAGAGA CTGATCTTAA GAAACTTGAT GATCAAACGG GAGAGAAGTC AGAAAATGCT 
ACCAGTGAAC TTCACTCATT CAAGTTGGAA TTTCAGACAT TGCAGAAGCA GCTCAGCGAC 
GTTATTGTGA AGACTTCCAA CAACAGAGCT GTTCTCAAAG AGCTACAGCT AGCTGGTGAG 
GACATGCAGA GTGGACATCT CTCGCTGCGA GACCTGCTGG AGAGCAATGC CAATGTCATC 
AGCAAAGTAA ACCACACTTT GAACACATAC AACAGTCTGA TTGATGGATT AAAAACAGAA 
ACGGCGAGAC TCCAGTCAGA TCTCCATGTA CAGACAAGTG AACAGGGCCA AAACAGCCAC 
AGCATCAGCA CTCTAAACTT TACCCAGACC CAGCAGAGGA ACCTCATCAG CTCCCTCCAG 
AGATCAGTGG AGGACACTGG CCAGGCTGTG CAGAAGCTTA AGAATGACTA TCAGAGCCTC 
CAGCAGGTGG CTAGGCAAAC CAAAGCAGAT GCTGATTGGC TGAGAGAGAA GGTGCAGAAC 
CTTCAGGCTT TAGCGGCTAA TAATTCTCTG CTGACTCGCT CTAACAGTGA CTCTCTAGAG 
GACGTAACCT CTCAGTTAAC CACACTGTCA GAGCAGGTCC AGAACACTTC GACCATCACT 
GACAGCCATG ATCAGAGCCT GCGTGAGCTC ATGGACCAGC AGCGAGATCA TGATAATGCC 
ACCTCCATTA GATTTGATGC ATTAGAGGCA CGTCTTGACA GCAATGAGGG GGAAATGGAC 
CGCATAACAG GGAATGTTAG CTTTACCACG CAGCTGCTCA GAGCGATCAG TACAGACTTG 
AATGGTCTGC GCACGTGCTC TGAGACGGTG ACCCGACACT CAGAACTGCT GCATGGGCTC 
AACAACAGTG TGGCTGAAAC CAGGGCAGAA AGCACAGAGC TCAAAGCCCA GCAGGAGGAA 
CTCGCTGTCA GGCTTGACAA AGAGGTCAGC AGCCTTTCCA TAGTTATGGA TGAAATGAAA 
CTGGTTGACA ACAAACACTC GCAGCTCATC ACAAACTTCA CCATCCTTCA GGGTCCTCCT 
GGTCCAAGGG GTCCTCGGGG AGATAAAGGG TCCATGGGGC TACCTGGTAA AACTGGCCCG 
AAAGGTGAAA AGGGTGAAAA AGGAGCACCT GGTGATGCTG GACCTAAAGG AGAAAAGGGT 
CCAGCGGGAC CTCCTGGTGT GCCAGGGTTG AAAGGGCCAC CTGGATCAAG AGGAAGCCCT 
GGGCCAAAGG GTTCACGAGG ATCTGGGGGC AGGCAAGGGC CTTCAGGGGA GAAAGGTGAC 
CCTGGGATAC CTGGTATGCC TGGAAGAGAT GGTCAGCCTG GTCCTACTGG CCCACAAGGG 
CCACAGGGAC TCAGAGGTCC AGCTGGACCT GCAGGACTAG AAGGAGCCCG TGGACCCGTA 
GGCCCCATTG GCCCACCAGG ACCACCTGGA TTACCAGGAC TTCCTGCACC ACCAATAGTT 
GTGCCACCAG TAGATCCACA AGGCTTTGTC AACCGCCAGG TAGCGCCGCC ACCAACAACT 
ACACCAGGAT GTCCCCCTCA GTGGAAGGGC TTCAGAGAGC AATGCTATCA CTTCTCAGCT 
CCAATGGAGA GTCTGAACTT TGATGAAGCC AAGGAAAGAT GCAGCAACTT GAGTTCATCT 
ATGCTGATTA TCAATGATGA AGAAGAGCAG CTATGGATAA AGAGGCAGAT TTCTGGAAAA 
GGCTACTTTT GGCTGGGCCT TACAGACAGC GCAGAGGAAA ACATCTGGAG ATGGGTGGAT 
GGGAGCCTGC CTAACTATAC AAAATGGAAA CCTGGTCAGC CTGATAACTG GAGCCATGGT 
CATGAAGCTG GTGAGGACTG CGCAGGGTTG ATACACGAGG CCAGTTGGAA TGACTTTTTC 
TGCACAGAAC GCATTGGTTT TATTTGTGAA CGAACTAATG AATCCAAAGT TCCAGTTTTA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Molecular cloning and functional analysis of scavenger receptor zebrafish CL-P1.
Biochimica et biophysica acta1810(12)1150-9(2011 Dec)
Fukuda M,Ohtani K,Jang SJ,Yoshizaki T,Mori K,Motomura W,Yoshida I,Suzuki Y,Kohgo Y,Wakamiya N

A gene expression screen in zebrafish embryogenesis.
Genome research11(12)1979-87(2001 Dec)
Kudoh T,Tsang M,Hukriede NA,Chen X,Dedekian M,Clarke CJ,Kiang A,Schultz S,Epstein JA,Toyama R,Dawid IB

Identification, characterization, and mapping of expressed sequence tags from an embryonic zebrafish heart cDNA library.
Genome research10(12)1915-27(2000 Dec)
Ton C,Hwang DM,Dempsey AA,Tang HC,Yoon J,Lim M,Mably JD,Fishman MC,Liew CC

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colec12 cDNA ORF clone, Danio rerio(zebrafish)

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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