pomp cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	pomp
Entrez Gene ID	445030
Full Name	proteasome maturation protein
Synonyms	fa13f09,wu:fa13f09,zgc:92775
General protein information	Preferred Names proteasome maturation protein Names proteasome maturation protein
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001003424.2	NP_001003424.1	proteasome maturation protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	POMP	NP_001238925.1
Macaca mulatta (Rhesus monkey)	POMP	XP_002800745.1
Mus musculus (house mouse)	Pomp	NP_079900.1
Homo sapiens (human)	POMP	NP_057016.1
Canis lupus familiaris (dog)	POMP	XP_534518.1
Gallus gallus (chicken)	POMP	XP_004938825.1
Danio rerio (zebrafish)	pomp	NP_001003424.1
Xenopus tropicalis (tropical clawed frog)	pomp	NP_001005093.1
Rattus norvegicus (Norway rat)	LOC100911238	XP_006248902.1
Bos taurus (cattle)	POMP	NP_001029548.1
Rattus norvegicus (Norway rat)	Pomp	NP_001094412.1

Gene Ontology
Bibliography

Related articles in PubMed

Characterization of genetic loss-of-function of Fus in zebrafish.
Lebedeva S, de Jesus Domingues AM, Butter F, Ketting RF
RNA biology14(1)29-35(2017 01)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish.
Yang D, Liu Q, Yang M, Wu H, Wang Q, Xiao J, Zhang Y
BMC genomics13319(2012 Jul)

A gain-of-function screen in zebrafish identifies a guanylate cyclase with a role in neuronal degeneration.
Maddison LA, Lu J, Victoroff T, Scott E, Baier H, Chen W
Molecular genetics and genomics : MGG281(5)551-63(2009 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following pomp gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the pomp cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36082	NM_001003424.2 Latest version!	Danio rerio proteasome maturation protein (pomp), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

pomp ( NM_001003424.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001003424.1 Danio rerio proteasome maturation protein (pomp), mRNA.

Price & Availability↑

CloneID	ODa36082
Clone ID Related Accession (Same CDS sequence)	NM_001003424.2
Accession Version	NM_001003424.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 429bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1542902400000
Organism	Danio rerio(zebrafish)
Product	proteasome maturation protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076250.1. On Aug 31, 2012 this sequence version replaced NM_001003424.1. ##Evidence-Data-START## Transcript exon combination :: BC076250.1, EH444556.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##

ATGAACACTC GTGGCCTGCG CTCTCAGCTG AAGGACAGTG TTCCTGTCAC AGGTCTGTGT 
CCTCAGGCTG GTCCTTATGG GGTCCAAGAC TCTCTGCGCA GAGGGTTCTC TAGTGTCAAA 
AATGAGCTTC TACCGAGTCA TCCATTGGAG CTCTCTGAGA AAAATTTTCA GCTTAACCAG 
GACAAGATGA ATTTCAACAC GCTAAGGAAC ATCCAGGGTC TCCATGCGCC CCTCAAACTA 
CAGATGGAGT ACAGAGCAGC TAAACAGATT CAGCGTTTGC CCTTCCTCCC AAGCTCAAAT 
CTGGCTCTGG ATACTCTTCG AGGCAGCGAT GACACCATCG GCTTTGAGGA CATTCTCAAT 
GATCCTGTGC AGTGTGAGAT GATGGGAGAT CCTCATATCA TGACCGAATA CAAGCTGGGT 
CTCCTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001003424.1
CDS	28..456
Translation	MNTRGLRSQLKDSVPVTGLCPQAGPYGVQDSLRRGFSSVKNELLPSHPLELSEKNFQLNQDKMNFNTLRNIQGLHAPLKLQMEYRAAKQIQRLPFLPSSNLALDTLRGSDDTIGFEDILNDPVQCEMMGDPHIMTEYKLGLL

Target ORF information:

RefSeq Version	NM_001003424.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio proteasome maturation protein (pomp), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001003424.2

ORF Insert Sequence:

ATGAACACTC GTGGCCTGCG CTCTCAGCTG AAGGACAGTG TTCCTGTCAC AGGTCTGTGT 
CCTCAGGCTG GTCCTTATGG GGTCCAAGAC TCTCTGCGCA GAGGGTTCTC TAGTGTCAAA 
AATGAGCTTC TACCGAGTCA TCCATTGGAG CTCTCTGAGA AAAATTTTCA GCTTAACCAG 
GACAAGATGA ATTTCAACAC GCTAAGGAAC ATCCAGGGTC TCCATGCGCC CCTCAAACTA 
CAGATGGAGT ACAGAGCAGC TAAACAGATT CAGCGTTTGC CCTTCCTCCC AAGCTCAAAT 
CTGGCTCTGG ATACTCTTCG AGGCAGCGAT GACACCATCG GCTTTGAGGA CATTCTCAAT 
GATCCTGTGC AGTGTGAGAT GATGGGAGAT CCTCATATCA TGACCGAATA CAAGCTGGGT 
CTCCTGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Characterization of genetic loss-of-function of Fus in zebrafish.
RNA biology14(1)29-35(2017 01)
Lebedeva S,de Jesus Domingues AM,Butter F,Ketting RF

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish.
BMC genomics13319(2012 Jul)
Yang D,Liu Q,Yang M,Wu H,Wang Q,Xiao J,Zhang Y

A gain-of-function screen in zebrafish identifies a guanylate cyclase with a role in neuronal degeneration.
Molecular genetics and genomics : MGG281(5)551-63(2009 May)
Maddison LA,Lu J,Victoroff T,Scott E,Baier H,Chen W

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pomp cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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