trappc1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	trappc1
Entrez Gene ID	437015
Full Name	trafficking protein particle complex 1
Synonyms	zgc:100969
General protein information	Preferred Names trafficking protein particle complex 1 Names trafficking protein particle complex subunit 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
XM_005170574.3	XP_005170631.1	trafficking protein particle complex subunit 1 isoform X1
XM_005170575.4	XP_005170632.1	trafficking protein particle complex subunit 1 isoform X1
XM_021469786.1	XP_021325461.1	trafficking protein particle complex subunit 1 isoform X2
XM_005170575.3	XP_005170632.1	trafficking protein particle complex subunit 1 isoform X2
NM_001002742.2	NP_001002742.1	trafficking protein particle complex subunit 1

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	TRAPPC1	XP_001172364.1
Bos taurus (cattle)	TRAPPC1	NP_001069881.1
Mus musculus (house mouse)	Trappc1	NP_001019377.1
Rattus norvegicus (Norway rat)	Trappc1	NP_001034467.1
Canis lupus familiaris (dog)	TRAPPC1	XP_536628.2
Caenorhabditis elegans (roundworm)	CELE_DC2.8	NP_001122900.2
Magnaporthe oryzae (rice blast fungus)	MGG_06435	XP_003717134.1
Oryza sativa (rice)	Os01g0513700	NP_001043184.1
Arabidopsis thaliana (thale cress)	AT1G51160	NP_175528.1
Xenopus tropicalis (tropical clawed frog)	trappc1	NP_001008076.1
Schizosaccharomyces pombe (fission yeast)	bet5	NP_594073.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000995	XP_309190.3
Homo sapiens (human)	TRAPPC1	NP_067033.1
Macaca mulatta (Rhesus monkey)	TRAPPC1	XP_001111285.1
Danio rerio (zebrafish)	trappc1	NP_001002742.1
Drosophila melanogaster (fruit fly)	Bet5	NP_651778.1
Neurospora crassa	NCU06176	XP_962988.1

Gene Ontology
Bibliography

Related articles in PubMed

Evolution of complexity in the zebrafish synapse proteome.
Bayés À, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 03)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following trappc1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the trappc1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ODa31501	NM_001002742.2 Latest version!	Danio rerio trafficking protein particle complex 1 (trappc1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa28135	XM_021469786.1 Latest version!	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa28135	XM_005170574.3 Latest version!	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
ODa28136	XM_005170575.4 Latest version!	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
View Old Accession Versions >>
ODa28136	XM_005170575.3	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$69.30 $99.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

trappc1 ( NM_001002742.2 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001002742.1 Danio rerio trafficking protein particle complex 1 (trappc1), mRNA.

Price & Availability↑

CloneID	ODa31501
Clone ID Related Accession (Same CDS sequence)	NM_001002742.2
Accession Version	NM_001002742.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 438bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1556553600000
Organism	Danio rerio(zebrafish)
Product	trafficking protein particle complex subunit 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076411.1. On Aug 31, 2012 this sequence version replaced NM_001002742.1. ##Evidence-Data-START## Transcript exon combination :: BC076411.1, CK685285.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAA CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGCG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001002742.1
CDS	68..505
Translation	MTVHNLYIFDRNGTCLHYSEWNRKKQAGISKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTNRYKLHYYETPTGIRLVMNTDLSAPNCRETLQQIYSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIRALPFFSVRAA

Target ORF information:

RefSeq Version	NM_001002742.2
Organism	Danio rerio(zebrafish)
Definition	Danio rerio trafficking protein particle complex 1 (trappc1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001002742.2

ORF Insert Sequence:

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAA CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGCG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

trappc1 ( XM_005170574.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005170631.1 Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa28135
Clone ID Related Accession (Same CDS sequence)	XM_005170574.3 , XM_021469786.1
Accession Version	XM_005170574.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 441bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	trafficking protein particle complex subunit 1 isoform X1
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170574.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGACTG TTCATAACTT GTATATATTT GATCGCAATG GCACCTGCCT TCACTACAGC 
GAGTGGAACC GCAAGAAACA GGCCGGAATC TCCAAAGAAG AGGAGTTTAA GCTGATGTAC 
GGGATGCTGT TCTCCATCCG CTCTTTCGTC AGTAAGATGA GTCCACTGGA CATGAAAGAC 
GGATTCCTGT CGTTCCAGAC CAGCCGCTAT AAACTGCATT ATTATGAAAC TCCCACAGGA 
ATCAGGCTGG TGATGAACAC AGACCTCAGT GTGCCGAACT GCAGAGAAAC CCTGCAGCAG 
ATCTACAGCA CTTTGTATGT GGATTTGATC GTGAAGAACC CGCTGTGTGT TCTGGGTGAG 
TCTCTGCAGA GTGAACTCTT CAACTCTAAG CTGGACTCCT TCATCCGAGC GCTACCGTTC 
TTCAGTGTGC GCGCAGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170631.1
CDS	69..509
Translation	MMTVHNLYIFDRNGTCLHYSEWNRKKQAGISKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIRLVMNTDLSVPNCRETLQQIYSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIRALPFFSVRAA

Target ORF information:

RefSeq Version	XM_005170574.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170574.3

ORF Insert Sequence:

ATGATGACTG TTCATAACTT GTATATATTT GATCGCAATG GCACCTGCCT TCACTACAGC 
GAGTGGAACC GCAAGAAACA GGCCGGAATC TCCAAAGAAG AGGAGTTTAA GCTGATGTAC 
GGGATGCTGT TCTCCATCCG CTCTTTCGTC AGTAAGATGA GTCCACTGGA CATGAAAGAC 
GGATTCCTGT CGTTCCAGAC CAGCCGCTAT AAACTGCATT ATTATGAAAC TCCCACAGGA 
ATCAGGCTGG TGATGAACAC AGACCTCAGT GTGCCGAACT GCAGAGAAAC CCTGCAGCAG 
ATCTACAGCA CTTTGTATGT GGATTTGATC GTGAAGAACC CGCTGTGTGT TCTGGGTGAG 
TCTCTGCAGA GTGAACTCTT CAACTCTAAG CTGGACTCCT TCATCCGAGC GCTACCGTTC 
TTCAGTGTGC GCGCAGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

trappc1 ( XM_021469786.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_021325461.1 Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa28135
Clone ID Related Accession (Same CDS sequence)	XM_005170574.3 , XM_021469786.1
Accession Version	XM_021469786.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 441bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	trafficking protein particle complex subunit 1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGACTG TTCATAACTT GTATATATTT GATCGCAATG GCACCTGCCT TCACTACAGC 
GAGTGGAACC GCAAGAAACA GGCCGGAATC TCCAAAGAAG AGGAGTTTAA GCTGATGTAC 
GGGATGCTGT TCTCCATCCG CTCTTTCGTC AGTAAGATGA GTCCACTGGA CATGAAAGAC 
GGATTCCTGT CGTTCCAGAC CAGCCGCTAT AAACTGCATT ATTATGAAAC TCCCACAGGA 
ATCAGGCTGG TGATGAACAC AGACCTCAGT GTGCCGAACT GCAGAGAAAC CCTGCAGCAG 
ATCTACAGCA CTTTGTATGT GGATTTGATC GTGAAGAACC CGCTGTGTGT TCTGGGTGAG 
TCTCTGCAGA GTGAACTCTT CAACTCTAAG CTGGACTCCT TCATCCGAGC GCTACCGTTC 
TTCAGTGTGC GCGCAGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021325461.1
CDS	75..515
Translation	MMTVHNLYIFDRNGTCLHYSEWNRKKQAGISKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIRLVMNTDLSVPNCRETLQQIYSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIRALPFFSVRAA

Target ORF information:

RefSeq Version	XM_021469786.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021469786.1

ORF Insert Sequence:

ATGATGACTG TTCATAACTT GTATATATTT GATCGCAATG GCACCTGCCT TCACTACAGC 
GAGTGGAACC GCAAGAAACA GGCCGGAATC TCCAAAGAAG AGGAGTTTAA GCTGATGTAC 
GGGATGCTGT TCTCCATCCG CTCTTTCGTC AGTAAGATGA GTCCACTGGA CATGAAAGAC 
GGATTCCTGT CGTTCCAGAC CAGCCGCTAT AAACTGCATT ATTATGAAAC TCCCACAGGA 
ATCAGGCTGG TGATGAACAC AGACCTCAGT GTGCCGAACT GCAGAGAAAC CCTGCAGCAG 
ATCTACAGCA CTTTGTATGT GGATTTGATC GTGAAGAACC CGCTGTGTGT TCTGGGTGAG 
TCTCTGCAGA GTGAACTCTT CAACTCTAAG CTGGACTCCT TCATCCGAGC GCTACCGTTC 
TTCAGTGTGC GCGCAGCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

trappc1 ( XM_005170575.4 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005170632.1 Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ODa28136
Clone ID Related Accession (Same CDS sequence)	XM_005170575.4 , XM_005170575.3
Accession Version	XM_005170575.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 438bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1497369600000
Organism	Danio rerio(zebrafish)
Product	trafficking protein particle complex subunit 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_005170575.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAG CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGTG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170632.1
CDS	125..562
Translation	MTVHNLYIFDRNGTCLHYSEWNRKKQAGISKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIRLVMNTDLSVPNCRETLQQIYSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIRALPFFSVRAA

Target ORF information:

RefSeq Version	XM_005170575.4
Organism	Danio rerio(zebrafish)
Definition	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170575.4

ORF Insert Sequence:

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAG CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGTG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

trappc1 ( XM_005170575.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> XP_005170632.1 Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ODa28136
Clone ID Related Accession (Same CDS sequence)	XM_005170575.4 , XM_005170575.3
Accession Version	XM_005170575.3	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 438bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1466611200000
Organism	Danio rerio(Zebrafish)
Product	trafficking protein particle complex subunit 1 isoform X2
Comment	MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007134.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_005170575.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAG CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGTG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_005170632.1
CDS	120..557
Translation	MTVHNLYIFDRNGTCLHYSEWNRKKQAGISKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQTSRYKLHYYETPTGIRLVMNTDLSVPNCRETLQQIYSTLYVDLIVKNPLCVLGESLQSELFNSKLDSFIRALPFFSVRAA

Target ORF information:

RefSeq Version	XM_005170575.3
Organism	Danio rerio(Zebrafish)
Definition	Danio rerio trafficking protein particle complex 1 (trappc1), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_005170575.3

ORF Insert Sequence:

ATGACTGTTC ATAACTTGTA TATATTTGAT CGCAATGGCA CCTGCCTTCA CTACAGCGAG 
TGGAACCGCA AGAAACAGGC CGGAATCTCC AAAGAAGAGG AGTTTAAGCT GATGTACGGG 
ATGCTGTTCT CCATCCGCTC TTTCGTCAGT AAGATGAGTC CACTGGACAT GAAAGACGGA 
TTCCTGTCGT TCCAGACCAG CCGCTATAAA CTGCATTATT ATGAAACTCC CACAGGAATC 
AGGCTGGTGA TGAACACAGA CCTCAGTGTG CCGAACTGCA GAGAAACCCT GCAGCAGATC 
TACAGCACTT TGTATGTGGA TTTGATCGTG AAGAACCCGC TGTGTGTTCT GGGTGAGTCT 
CTGCAGAGTG AACTCTTCAA CTCTAAGCTG GACTCCTTCA TCCGAGCGCT ACCGTTCTTC 
AGTGTGCGCG CAGCATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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trappc1 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

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