tlr9 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tlr9
Entrez Gene ID	403128
Full Name	toll-like receptor 9
Synonyms	sb:eu392
General protein information	Preferred Names toll-like receptor 9 Names toll-like receptor 9 TIR9
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001130594.1	NP_001124066.1	toll-like receptor 9 precursor

Pathways from BioSystems

Homologies

Xenopus tropicalis (tropical clawed frog)	LOC100494387	XP_002936533.2
Homo sapiens (human)	TLR9	NP_059138.1
Canis lupus familiaris (dog)	TLR9	NP_001002998.1
Rattus norvegicus (Norway rat)	Tlr9	NP_937764.1
Bos taurus (cattle)	TLR9	NP_898904.1
Danio rerio (zebrafish)	tlr9	NP_001124066.1
Pan troglodytes (chimpanzee)	TLR9	NP_001138338.1
Macaca mulatta (Rhesus monkey)	TLR9	NP_001123903.1
Mus musculus (house mouse)	Tlr9	NP_112455.2

Gene Ontology
Bibliography

Related articles in PubMed

Carp Toll-like receptor 8 (Tlr8): An intracellular Tlr that recruits TIRAP as adaptor and activates AP-1 pathway in immune response.
Shan S, Liu R, Jiang L, Zhu Y, Li H, Xing W, Yang G
Fish & shellfish immunology8241-49(2018 Nov)

Innate immune system activation in zebrafish and cellular models of Diamond Blackfan Anemia.
Danilova N, Wilkes M, Bibikova E, Youn MY, Sakamoto KM, Lin S
Scientific reports8(1)5165(2018 03)

Host-probiotic interaction: new insight into the role of the endocannabinoid system by in vivo and ex vivo approaches.
Gioacchini G, Rossi G, Carnevali O
Scientific reports7(1)1261(2017 04)

Srivastava N, Shelly A, Kumar M, Pant A, Das B, Majumdar T, Mazumder S
Cell death discovery317067(2017)

Scavenger Receptor SCARA5 Acts as an HMGB1 Recognition Molecule Negatively Involved in HMGB1-Mediated Inflammation in Fish Models.
Guo DY, Cao C, Zhang XY, Xiang LX, Shao JZ
Journal of immunology (Baltimore, Md. : 1950)197(8)3198-3213(2016 10)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tlr9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tlr9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa00705	NM_001130594.1 Latest version!	Danio rerio toll-like receptor 9 (tlr9), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tlr9 ( NM_001130594.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001124066.1 Danio rerio toll-like receptor 9 (tlr9), mRNA.

Price & Availability↑

CloneID	ODa00705
Clone ID Related Accession (Same CDS sequence)	NM_001130594.1
Accession Version	NM_001130594.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3174bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1547913600000
Organism	Danio rerio(zebrafish)
Product	toll-like receptor 9 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163628.1. On Jul 30, 2008 this sequence version replaced XM_685911.3. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC163628.1 [ECO:0000332] ##Evidence-Data-END##

ATGTTTGGAC CAATGGTGTC CTTGATTCTG CTTCTGAATC AGTTCCAACT CTTCGCAGCT 
TCACATCCTC AGTTTTATCC GTGTGAAAGT CACTCCACCA AAGACGGACA CATAAATGTG 
GACTGCCAGC ACAGACGGCT CTCTAAAGTC CCCAGGTTCA CTTCTCCCTC AGTTATATCA 
CTCAACCTGA ATAACAACCA TATACACCGC ATTAAAGGGG ATGCATTTTC TGGTCTACCC 
AATCTCAAGT ATCTCAGCCT GATGTGGAAC TGTATATCAG ACCGTCTTAA GGAGGCAAGA 
TGGCCGTTAT GCAGTGTGAA TATTGACCCA GATGCCTTTG TTGGACTGAA AAACCTCACT 
TCCCTTCAGT TAGCTGGGAA CAGCTTGAAG ATGATTCCTC CTCTGCCAAA GCAGCTTGAA 
GTCCTGGGAC TGGAATTCAA CAATATTTTT AATATCGTCA AACCTTTAGG TACACCACAA 
CTAAAGCAAC TGCTGCTAAG CAAGAACTGT TTCTACGCAA ACCCATGCCA CCAGCCTTAC 
TTTATCAACT CAAGTGTGTT TCAGGATCTT CCTGAGCTTT TGAACCTCAC CCTTAGTTAC 
AACAACTTGA CTGCCATTCC CTCGTATCTT CCAGGTTCAC TAGAAAGTCT AGACTTGCGA 
GAGAATACAA TTGATCACAT CAATAAAGAG TCCTTTGCAA ATCTCAGAAA TCTGCGACAT 
CTCAACCTGG GGTGGAACTG CCAAAGGTGC GACCACGCTT CTGATCCCTG CTTCCCATGC 
CCAAACAACC AGTCTCTGGA TCTCCATCAG GATGCCTTTT TGGACCAGAG AGACTCCCTA 
GTGAGTCTGC ATCTGCAAGG CAACTCGCTT CGTACTCTTC CTCGACATCT CTTCATAAAC 
CTACACAAGC TCCAAGAGTT AGATCTCTCA AGCAACTTTC TAGCCTTCAC CATCCAAAAC 
GGCACCTTTT ACGAGGAGCT CCAGAATGTT GTGATTCTCA ATCTTCTCTA CAACTATGAA 
CCCCTGAAAA CCTTTCCCGA ATTGAATCTG TCACCGTACA TAGAGAAGAT GGCGTCTCTC 
AGAGAGTTGT ACCTGAGTGG GTTTTTCTTC AAGAAGCTGT CAAACCGCAG CATTGCACCT 
TTGGTCAAAC TTCCAAGACT TGAGGTCTTA GATTTACGCA TGAACTTCAT CTGCGACATT 
AGCATTGACG GTCTTAGCCA GCTGAGGACA TTAAGAAGAG TAGATCTTTC CCAGAACATG 
CTCGCCTTTA GTTCGTGCTT TTCAACATGC ACTTCTGAAG CAGAACACCA AATCCCTGAA 
AGATATGGCA ATGAACAGTT CAACCTCCAA ATGCAAGAAC TCCCCATTCT GAATGCAGAA 
ACACAAGGCT CAAAACCAGA CTACTGTTCT TTTTATTTCT CCATGTGGCA TTTCAAAAGA 
CAAATCTGCT CTAAAAGCTT ATATTTTGAC CTGTCTCAGA ACAACATCCC ATGGCTGAAC 
GCAAGCACTT TTAGAGGCAT GGACAGAGTG GCATGCGTAG ATCTGTCCTA CAACTACATC 
AGTCAAACTT TAAACGGCCA CCAATTCTCA CATCTGAGCA AACTATCTTA CCTTAATATG 
GCGTACAACC GTATTGACCT GTATTCCGAC AAGGCCTTTC AGGAGGTCAG TGGCACCCTA 
AAGGCTCTTG ACCTCAGCAA TAACGAGTTC CACTTTATAA TGAAGGGAAT GGGGCATCAG 
TTCACGTTCC TCACGCACAT GTCGTCTCTT ATAATACTAA GTCTAGCAAA CAATCACATC 
GGTCTCCGGA TCTCAAACAT CCTCACCAGC GCTTCTCTGA AGTATCTCAT TTTCTCTGGG 
AATCGTTTGG ACATATTGTG GGACTCTTGG CGTAATCAAT ACATAAACCT CTTTCAGGGA 
CTCACCAACC TTACGCACTT GGACATCTCT GAAAATCAGC TCAAATCTCT CTCCCCAGAG 
GTAATCGTGA ACTTGCCTTT GAGTCTCCAA GTTCTCCGAG TCGACTTCAA CATGTTGACG 
TATTTCCCGT GGGCAAACAT CTCAGTTCTC CAGAAACTCT GCTACCTCAA TCTGAGTTCA 
AACATGCTTT CGTACTTGCC CAATATTAAC TTTGAGCTCC GTCTCACAGG ACTGGATTTA 
AGTCACAACC GACTGGTTGC AATTCCAAAG GTATTCCTTA GTCAGGCAGC AAACCTTAAA 
AACCTCAATC TCAACAACAA CCAACTCAAG ATTCTTGACG TCCAGGCTCT CCCCTTGCCA 
TTCCACAAGG GTTGTACTTT CATTCCCGGT GGGCAGCATA AAAACAGGTC CTCCTGCAAA 
CTTGTCCTAC ATGCCAATCC TTTTACTTGC AGTTGTGTTA TTTCAGGATT TGCCAAATTT 
CTTAGAGAAA CCGATTTGGA TGTGCCTCAT CTCACTACAC AGGTTCACTG TGGTTTCCCG 
GAGTCATTAG CCGGCGTGAA TGTCCTCTCG GTGGATCTTC GCTCATGCCA GGAGATATTC 
GGAGGAGTCG CCTTCCTCTG TACTTCACTA TTGACACTAG CAGCAACTTG CGTTCCTCTC 
CTGAAGCATC TCTACGGCTG GGACCTGTGG TATTTAATCC AGATTCTGTG GACTGGACAT 
CGGGGACACA CTCCAGCTAA TGGCAACCCC ACGGACACCC AGTATGATGC ATTTGTGGTC 
TTCGATACCA GTAATAAGGC AGTCAGGGAT TGGATCTACA AGGAGATGCT TGTGAGATTG 
GAGAACCGGG GGAGATGGCG CTTTCAGCTT TGCCTAGAAG AGCGTGACTG GATTCCTGGA 
GTCTCGTGCA TTGAGAATCT GCACAAGTCC GTTTACAGCA GCAGAAAGAC AGTGTTTGTG 
TTGACCAGCC CTGGGGGTTA TTCTGACGCA AGTGGAATAG TACGTCAAGC CTTCCTTTTA 
GTGCAGCAGA GACTTCTGGA TGAGAAGGTG GACGTCGCTG TTCTGGTTTT GCTGGATTTT 
CTCTTCCCCA AATTCAAGTA CCTTCAGATG AGAAAGCGAC TCTGCAAGAA GTCAGTTCTG 
TCCTGGCCCA GAAACCCACG AGTGCAGCCG CTCTTCTGGA ATGACCTGCG CGTCGCTCTC 
GTTTCTGACA ATGTTAGAGC CTACAACAAG AACGTCACGG AGAGCTTCTT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001124066.1
CDS	98..3271
Translation	MFGPMVSLILLLNQFQLFAASHPQFYPCESHSTKDGHINVDCQHRRLSKVPRFTSPSVISLNLNNNHIHRIKGDAFSGLPNLKYLSLMWNCISDRLKEARWPLCSVNIDPDAFVGLKNLTSLQLAGNSLKMIPPLPKQLEVLGLEFNNIFNIVKPLGTPQLKQLLLSKNCFYANPCHQPYFINSSVFQDLPELLNLTLSYNNLTAIPSYLPGSLESLDLRENTIDHINKESFANLRNLRHLNLGWNCQRCDHASDPCFPCPNNQSLDLHQDAFLDQRDSLVSLHLQGNSLRTLPRHLFINLHKLQELDLSSNFLAFTIQNGTFYEELQNVVILNLLYNYEPLKTFPELNLSPYIEKMASLRELYLSGFFFKKLSNRSIAPLVKLPRLEVLDLRMNFICDISIDGLSQLRTLRRVDLSQNMLAFSSCFSTCTSEAEHQIPERYGNEQFNLQMQELPILNAETQGSKPDYCSFYFSMWHFKRQICSKSLYFDLSQNNIPWLNASTFRGMDRVACVDLSYNYISQTLNGHQFSHLSKLSYLNMAYNRIDLYSDKAFQEVSGTLKALDLSNNEFHFIMKGMGHQFTFLTHMSSLIILSLANNHIGLRISNILTSASLKYLIFSGNRLDILWDSWRNQYINLFQGLTNLTHLDISENQLKSLSPEVIVNLPLSLQVLRVDFNMLTYFPWANISVLQKLCYLNLSSNMLSYLPNINFELRLTGLDLSHNRLVAIPKVFLSQAANLKNLNLNNNQLKILDVQALPLPFHKGCTFIPGGQHKNRSSCKLVLHANPFTCSCVISGFAKFLRETDLDVPHLTTQVHCGFPESLAGVNVLSVDLRSCQEIFGGVAFLCTSLLTLAATCVPLLKHLYGWDLWYLIQILWTGHRGHTPANGNPTDTQYDAFVVFDTSNKAVRDWIYKEMLVRLENRGRWRFQLCLEERDWIPGVSCIENLHKSVYSSRKTVFVLTSPGGYSDASGIVRQAFLLVQQRLLDEKVDVAVLVLLDFLFPKFKYLQMRKRLCKKSVLSWPRNPRVQPLFWNDLRVALVSDNVRAYNKNVTESFF

Target ORF information:

RefSeq Version	NM_001130594.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio toll-like receptor 9 (tlr9), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001130594.1

ORF Insert Sequence:

ATGTTTGGAC CAATGGTGTC CTTGATTCTG CTTCTGAATC AGTTCCAACT CTTCGCAGCT 
TCACATCCTC AGTTTTATCC GTGTGAAAGT CACTCCACCA AAGACGGACA CATAAATGTG 
GACTGCCAGC ACAGACGGCT CTCTAAAGTC CCCAGGTTCA CTTCTCCCTC AGTTATATCA 
CTCAACCTGA ATAACAACCA TATACACCGC ATTAAAGGGG ATGCATTTTC TGGTCTACCC 
AATCTCAAGT ATCTCAGCCT GATGTGGAAC TGTATATCAG ACCGTCTTAA GGAGGCAAGA 
TGGCCGTTAT GCAGTGTGAA TATTGACCCA GATGCCTTTG TTGGACTGAA AAACCTCACT 
TCCCTTCAGT TAGCTGGGAA CAGCTTGAAG ATGATTCCTC CTCTGCCAAA GCAGCTTGAA 
GTCCTGGGAC TGGAATTCAA CAATATTTTT AATATCGTCA AACCTTTAGG TACACCACAA 
CTAAAGCAAC TGCTGCTAAG CAAGAACTGT TTCTACGCAA ACCCATGCCA CCAGCCTTAC 
TTTATCAACT CAAGTGTGTT TCAGGATCTT CCTGAGCTTT TGAACCTCAC CCTTAGTTAC 
AACAACTTGA CTGCCATTCC CTCGTATCTT CCAGGTTCAC TAGAAAGTCT AGACTTGCGA 
GAGAATACAA TTGATCACAT CAATAAAGAG TCCTTTGCAA ATCTCAGAAA TCTGCGACAT 
CTCAACCTGG GGTGGAACTG CCAAAGGTGC GACCACGCTT CTGATCCCTG CTTCCCATGC 
CCAAACAACC AGTCTCTGGA TCTCCATCAG GATGCCTTTT TGGACCAGAG AGACTCCCTA 
GTGAGTCTGC ATCTGCAAGG CAACTCGCTT CGTACTCTTC CTCGACATCT CTTCATAAAC 
CTACACAAGC TCCAAGAGTT AGATCTCTCA AGCAACTTTC TAGCCTTCAC CATCCAAAAC 
GGCACCTTTT ACGAGGAGCT CCAGAATGTT GTGATTCTCA ATCTTCTCTA CAACTATGAA 
CCCCTGAAAA CCTTTCCCGA ATTGAATCTG TCACCGTACA TAGAGAAGAT GGCGTCTCTC 
AGAGAGTTGT ACCTGAGTGG GTTTTTCTTC AAGAAGCTGT CAAACCGCAG CATTGCACCT 
TTGGTCAAAC TTCCAAGACT TGAGGTCTTA GATTTACGCA TGAACTTCAT CTGCGACATT 
AGCATTGACG GTCTTAGCCA GCTGAGGACA TTAAGAAGAG TAGATCTTTC CCAGAACATG 
CTCGCCTTTA GTTCGTGCTT TTCAACATGC ACTTCTGAAG CAGAACACCA AATCCCTGAA 
AGATATGGCA ATGAACAGTT CAACCTCCAA ATGCAAGAAC TCCCCATTCT GAATGCAGAA 
ACACAAGGCT CAAAACCAGA CTACTGTTCT TTTTATTTCT CCATGTGGCA TTTCAAAAGA 
CAAATCTGCT CTAAAAGCTT ATATTTTGAC CTGTCTCAGA ACAACATCCC ATGGCTGAAC 
GCAAGCACTT TTAGAGGCAT GGACAGAGTG GCATGCGTAG ATCTGTCCTA CAACTACATC 
AGTCAAACTT TAAACGGCCA CCAATTCTCA CATCTGAGCA AACTATCTTA CCTTAATATG 
GCGTACAACC GTATTGACCT GTATTCCGAC AAGGCCTTTC AGGAGGTCAG TGGCACCCTA 
AAGGCTCTTG ACCTCAGCAA TAACGAGTTC CACTTTATAA TGAAGGGAAT GGGGCATCAG 
TTCACGTTCC TCACGCACAT GTCGTCTCTT ATAATACTAA GTCTAGCAAA CAATCACATC 
GGTCTCCGGA TCTCAAACAT CCTCACCAGC GCTTCTCTGA AGTATCTCAT TTTCTCTGGG 
AATCGTTTGG ACATATTGTG GGACTCTTGG CGTAATCAAT ACATAAACCT CTTTCAGGGA 
CTCACCAACC TTACGCACTT GGACATCTCT GAAAATCAGC TCAAATCTCT CTCCCCAGAG 
GTAATCGTGA ACTTGCCTTT GAGTCTCCAA GTTCTCCGAG TCGACTTCAA CATGTTGACG 
TATTTCCCGT GGGCAAACAT CTCAGTTCTC CAGAAACTCT GCTACCTCAA TCTGAGTTCA 
AACATGCTTT CGTACTTGCC CAATATTAAC TTTGAGCTCC GTCTCACAGG ACTGGATTTA 
AGTCACAACC GACTGGTTGC AATTCCAAAG GTATTCCTTA GTCAGGCAGC AAACCTTAAA 
AACCTCAATC TCAACAACAA CCAACTCAAG ATTCTTGACG TCCAGGCTCT CCCCTTGCCA 
TTCCACAAGG GTTGTACTTT CATTCCCGGT GGGCAGCATA AAAACAGGTC CTCCTGCAAA 
CTTGTCCTAC ATGCCAATCC TTTTACTTGC AGTTGTGTTA TTTCAGGATT TGCCAAATTT 
CTTAGAGAAA CCGATTTGGA TGTGCCTCAT CTCACTACAC AGGTTCACTG TGGTTTCCCG 
GAGTCATTAG CCGGCGTGAA TGTCCTCTCG GTGGATCTTC GCTCATGCCA GGAGATATTC 
GGAGGAGTCG CCTTCCTCTG TACTTCACTA TTGACACTAG CAGCAACTTG CGTTCCTCTC 
CTGAAGCATC TCTACGGCTG GGACCTGTGG TATTTAATCC AGATTCTGTG GACTGGACAT 
CGGGGACACA CTCCAGCTAA TGGCAACCCC ACGGACACCC AGTATGATGC ATTTGTGGTC 
TTCGATACCA GTAATAAGGC AGTCAGGGAT TGGATCTACA AGGAGATGCT TGTGAGATTG 
GAGAACCGGG GGAGATGGCG CTTTCAGCTT TGCCTAGAAG AGCGTGACTG GATTCCTGGA 
GTCTCGTGCA TTGAGAATCT GCACAAGTCC GTTTACAGCA GCAGAAAGAC AGTGTTTGTG 
TTGACCAGCC CTGGGGGTTA TTCTGACGCA AGTGGAATAG TACGTCAAGC CTTCCTTTTA 
GTGCAGCAGA GACTTCTGGA TGAGAAGGTG GACGTCGCTG TTCTGGTTTT GCTGGATTTT 
CTCTTCCCCA AATTCAAGTA CCTTCAGATG AGAAAGCGAC TCTGCAAGAA GTCAGTTCTG 
TCCTGGCCCA GAAACCCACG AGTGCAGCCG CTCTTCTGGA ATGACCTGCG CGTCGCTCTC 
GTTTCTGACA ATGTTAGAGC CTACAACAAG AACGTCACGG AGAGCTTCTT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Carp Toll-like receptor 8 (Tlr8): An intracellular Tlr that recruits TIRAP as adaptor and activates AP-1 pathway in immune response.
Fish & shellfish immunology8241-49(2018 Nov)
Shan S,Liu R,Jiang L,Zhu Y,Li H,Xing W,Yang G

Innate immune system activation in zebrafish and cellular models of Diamond Blackfan Anemia.
Scientific reports8(1)5165(2018 03)
Danilova N,Wilkes M,Bibikova E,Youn MY,Sakamoto KM,Lin S

Host-probiotic interaction: new insight into the role of the endocannabinoid system by in vivo and ex vivo approaches.
Scientific reports7(1)1261(2017 04)
Gioacchini G,Rossi G,Carnevali O

Cell death discovery317067(2017)
Srivastava N,Shelly A,Kumar M,Pant A,Das B,Majumdar T,Mazumder S

Scavenger Receptor SCARA5 Acts as an HMGB1 Recognition Molecule Negatively Involved in HMGB1-Mediated Inflammation in Fish Models.
Journal of immunology (Baltimore, Md. : 1950)197(8)3198-3213(2016 10)
Guo DY,Cao C,Zhang XY,Xiang LX,Shao JZ

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tlr9 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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