| Gene Symbol | yy1a |
| Entrez Gene ID | 322397 |
| Full Name | YY1 transcription factor a |
| Synonyms | fb59g10,wu:fa16g07,wu:fb59g10,yy1 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
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yy1a cDNA ORF clone, Danio rerio(zebrafish)
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Gene
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Clones
gRNAs
The following yy1a gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the yy1a cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ODa141167 Clone ID Related Accession (Same CDS sequence) NM_212617.2 Accession Version NM_212617.2 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1074bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1542902400000 Organism Danio rerio(zebrafish) Product transcriptional repressor protein YY1 Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX546455.6. On May 31, 2017 this sequence version replaced NM_212617.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: BC071351.1, GDQQ01005365.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGGCGTCGG GCGAGACACT GTACATCGAG GCCGACGGCT CGGAAATGCC GGCCGAGATC
GTCGAGCTGC ACGAAATCGA AGTTGAGACT ATCGAGACCA CAGTGGTCGG CGGAGACGAC
GACGAGCACC AGCCCATGAT CGCCCTGCAG CCGCTGGTCA CGGACGACCC GAACCACGTT
AACCACCAGG AGGTGATTTT AGTGCAAACT CGTGAAGAGG TGGTGGGTTG CGATGACTCG
GACCTCCATG CAGACGACAG TTTCGAGGAC CAGATCCTCA TTCCCGTGCC CGTTCCGGTG
GCAGAGGAGG AATATATCGA GCAGACTTTA GTGACCGTGT CTGGCAAGAA TCCGTCTGGT
AGGATGAAGA AAGGAGGAGG CAGTGGGAAA AGAGTGGTCA AAAAGAGCTT CCTAAACTCC
GCTGAAGCGA GCGGACGCAA ATGGGAGCAG AAACAAGTGC AGATCAAAAC ACTGGAGGGG
GAGTTTTCCG TCACTATGTG GGCATCGGAT GATAAGAAAG ATGTTGATCA TGAGACAGTG
GTGGAGGAGC AGATCATTGG AGAAAACTCT CCTCCAGATT ATTCAGAATA CATGACAGGC
AAGAAACTGC CACCTGGTGG CATACCCGGC ATTGACCTGT CAGACCCCAA ACAGCTGGCA
GAGTTTGCCA GAATGAAGCC TAGGAAAATA AAAGAAGATG ATTCTCCAAG GACGATAGCT
TGCCCACACA AAGGTTGCAC AAAAATGTTT CGGGATAACT CCGCTATGAG GAAGCACTTG
CACACCCACG GGCCGCGGGT TCACGTCTGC GCTGAATGTG GGAAGGCGTT TGTGGAAAGT
TCCAAGCTAA AACGGCATCA GTTGGTTCAT ACTGGTGAAA AACCTTTCCA GTGCACATTT
GAGGGATGTG GAAAGCGCTT CTCATTGGAC TTTAACTTGC GCACACATGT GCGGATTCAC
ACTGGAGACA GACCGTACGT TTGCCCGTTC GATGGCTGTA ACAAGAAATT TGCTCAGTCC
ACCAACCTGA AGTCTCACAT TTTGACACAC GCGAAAGCTA AGAACAATCA GTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_997782.1 CDS 117..1190 Translation 
Target ORF information:
RefSeq Version NM_212617.2 Organism Danio rerio(zebrafish) Definition Danio rerio YY1 transcription factor a (yy1a), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_212617.2
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGGCGTCGG GCGAGACACT GTACATCGAG GCCGACGGCT CGGAAATGCC GGCCGAGATC
GTCGAGCTGC ACGAAATCGA AGTTGAGACT ATCGAGACCA CAGTGGTCGG CGGAGACGAC
GACGAGCACC AGCCCATGAT CGCCCTGCAG CCGCTGGTCA CGGACGACCC GAACCACGTT
AACCACCAGG AGGTGATTTT AGTGCAAACT CGTGAAGAGG TGGTGGGTTG CGATGACTCG
GACCTCCATG CAGACGACAG TTTCGAGGAC CAGATCCTCA TTCCCGTGCC CGTTCCGGTG
GCAGAGGAGG AATATATCGA GCAGACTTTA GTGACCGTGT CTGGCAAGAA TCCGTCTGGT
AGGATGAAGA AAGGAGGAGG CAGTGGGAAA AGAGTGGTCA AAAAGAGCTT CCTAAACTCC
GCTGAAGCGA GCGGACGCAA ATGGGAGCAG AAACAAGTGC AGATCAAAAC ACTGGAGGGG
GAGTTTTCCG TCACTATGTG GGCATCGGAT GATAAGAAAG ATGTTGATCA TGAGACAGTG
GTGGAGGAGC AGATCATTGG AGAAAACTCT CCTCCAGATT ATTCAGAATA CATGACAGGC
AAGAAACTGC CACCTGGTGG CATACCCGGC ATTGACCTGT CAGACCCCAA ACAGCTGGCA
GAGTTTGCCA GAATGAAGCC TAGGAAAATA AAAGAAGATG ATTCTCCAAG GACGATAGCT
TGCCCACACA AAGGTTGCAC AAAAATGTTT CGGGATAACT CCGCTATGAG GAAGCACTTG
CACACCCACG GGCCGCGGGT TCACGTCTGC GCTGAATGTG GGAAGGCGTT TGTGGAAAGT
TCCAAGCTAA AACGGCATCA GTTGGTTCAT ACTGGTGAAA AACCTTTCCA GTGCACATTT
GAGGGATGTG GAAAGCGCTT CTCATTGGAC TTTAACTTGC GCACACATGT GCGGATTCAC
ACTGGAGACA GACCGTACGT TTGCCCGTTC GATGGCTGTA ACAAGAAATT TGCTCAGTCC
ACCAACCTGA AGTCTCACAT TTTGACACAC GCGAAAGCTA AGAACAATCA GTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID ODa35151 Clone ID Related Accession (Same CDS sequence) NM_212617.1 Accession Version NM_212617.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 1074bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1466784000000 Organism Danio rerio(Zebrafish) Product transcriptional repressor protein YY1 Comment PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF389345.1. ##Evidence-Data-START## CDS exon combination :: AF389345.1 [ECO:0000331] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGGCGTCGG GCGAGACACT GTACATCGAG GCCGACGGCT CGGAAATGCC GGCCGAGATC
GTCGAGCTGC ACGAAATCGA AGTTGAGACT ATCGAGACCA CAGTGGTCGG CGGAGACGAC
GACGAGCACC AGCCCATGAT CGCCCTGCAG CCGCTGGTCA CGGACGACCC GAACCACGTT
AACCACCAGG AGGTGATTTT AGTGCAAACT CGTGAAGAGG TGGTGGGTTG CGATGACTCG
GACCTCCATG CAGACGACAG TTTCGAGGAC CAGATCCTCA TTCCCGTGCC CGTTCCGGTG
GCAGAGGAGG AATATATCGA GCAGACTTTA GTGACCGTGT CTGGCAAGAA TCCGTCTGGT
AGGATGAAGA AAGGAGGAGG CAGTGGGAAA AGAGTGGTCA AAAAGAGCTT CCTAAACTCC
GCTGAAGCGA GCGGACGCAA ATGGGAGCAG AAACAAGTAC AGATCAAAAC ACTGGAGGGG
GAGTTTTCCG TCACTATGTG GGCATCGGAT GATAAGAAAG ATGTTGATCA TGAGACAGTG
GTGGAGGAGC AGATCATTGG AGAAAACTCT CCTCCAGATT ATTCAGAATA CATGACAGGC
AAGAAACTGC CACCTGGTGG CATACCCGGC ATTGACCTGT CAGACCCAAA ACAGCTGGCA
GAGTTTGCCA GAATGAAGCC TAGGAAAATA AAAGAAGATG ATTCTCCAAG GACGATAGCT
TGCCCACACA AAGGTTGCAC AAAAATGTTT CGGGATAACT CCGCTATGAG GAAGCACTTG
CACACCCACG GGCCGCGGGT TCACGTCTGC GCTGAATGTG GGAAGGCGTT TGTGGAAAGT
TCCAAGCTAA AACGGCATCA GTTGGTTCAT ACTGGTGAAA AACCTTTCCA GTGCACATTT
GAGGGATGTG GAAAGCGCTT CTCATTGGAC TTTAACTTGC GCACACATGT GCGGATTCAC
ACTGGAGACA GACCGTACGT TTGCCCGTTC GATGGCTGTA ACAAGAAATT TGCTCAGTCC
ACCAACCTGA AGTCTCACAT TTTGACACAC GCGAAAGCTA AGAACAATCA GTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_997782.1 CDS 988..2061 Translation
Target ORF information:
RefSeq Version NM_212617.1 Organism Danio rerio(Zebrafish) Definition Danio rerio YY1 transcription factor a (yy1a), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK NM_212617.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGGCGTCGG GCGAGACACT GTACATCGAG GCCGACGGCT CGGAAATGCC GGCCGAGATC
GTCGAGCTGC ACGAAATCGA AGTTGAGACT ATCGAGACCA CAGTGGTCGG CGGAGACGAC
GACGAGCACC AGCCCATGAT CGCCCTGCAG CCGCTGGTCA CGGACGACCC GAACCACGTT
AACCACCAGG AGGTGATTTT AGTGCAAACT CGTGAAGAGG TGGTGGGTTG CGATGACTCG
GACCTCCATG CAGACGACAG TTTCGAGGAC CAGATCCTCA TTCCCGTGCC CGTTCCGGTG
GCAGAGGAGG AATATATCGA GCAGACTTTA GTGACCGTGT CTGGCAAGAA TCCGTCTGGT
AGGATGAAGA AAGGAGGAGG CAGTGGGAAA AGAGTGGTCA AAAAGAGCTT CCTAAACTCC
GCTGAAGCGA GCGGACGCAA ATGGGAGCAG AAACAAGTAC AGATCAAAAC ACTGGAGGGG
GAGTTTTCCG TCACTATGTG GGCATCGGAT GATAAGAAAG ATGTTGATCA TGAGACAGTG
GTGGAGGAGC AGATCATTGG AGAAAACTCT CCTCCAGATT ATTCAGAATA CATGACAGGC
AAGAAACTGC CACCTGGTGG CATACCCGGC ATTGACCTGT CAGACCCAAA ACAGCTGGCA
GAGTTTGCCA GAATGAAGCC TAGGAAAATA AAAGAAGATG ATTCTCCAAG GACGATAGCT
TGCCCACACA AAGGTTGCAC AAAAATGTTT CGGGATAACT CCGCTATGAG GAAGCACTTG
CACACCCACG GGCCGCGGGT TCACGTCTGC GCTGAATGTG GGAAGGCGTT TGTGGAAAGT
TCCAAGCTAA AACGGCATCA GTTGGTTCAT ACTGGTGAAA AACCTTTCCA GTGCACATTT
GAGGGATGTG GAAAGCGCTT CTCATTGGAC TTTAACTTGC GCACACATGT GCGGATTCAC
ACTGGAGACA GACCGTACGT TTGCCCGTTC GATGGCTGTA ACAAGAAATT TGCTCAGTCC
ACCAACCTGA AGTCTCACAT TTTGACACAC GCGAAAGCTA AGAACAATCA GTGAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Competitive binding between Seryl-tRNA synthetase/YY1 complex and NFKB1 at the distal segment results in differential regulation of human vegfa promoter activity during angiogenesis.
Nucleic acids research45(5)2423-2437(2017 03)
Fu CY,Wang PC,Tsai HJ
Knockdown of zebrafish YY1a can downregulate the phosphatidylserine (PS) receptor expression, leading to induce the abnormal brain and heart development.
Journal of biomedical science2331(2016 Feb)
Shiu WL,Huang KR,Hung JC,Wu JL,Hong JR
RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R
Ubiquitous transcription factor YY1 promotes zebrafish liver steatosis and lipotoxicity by inhibiting CHOP-10 expression.
Biochimica et biophysica acta1831(6)1037-51(2013 Jun)
Her GM,Pai WY,Lai CY,Hsieh YW,Pang HW
A comparative expression analysis of gene transcripts in brain tissue of non-transgenic and GH-transgenic zebrafish (Danio rerio) using a DDRT-PCR approach.
Anais da Academia Brasileira de Ciencias84(2)487-94(2012 Jun)
Alves-Costa FA,Figueiredo MA,Lanes CF,Almeida DV,Marins LF,Wasko AP
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