traf1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	traf1
Entrez Gene ID	100148503
Full Name	TNF receptor-associated factor 1
General protein information	Preferred Names TNF receptor-associated factor 1 Names TNF receptor-associated factor 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001128381.1	NP_001121853.1	TNF receptor-associated factor 1

Pathways from BioSystems

Homologies

Gallus gallus (chicken)	TRAF1	XP_004946050.1
Homo sapiens (human)	TRAF1	NP_001177874.1
Danio rerio (zebrafish)	traf1	NP_001121853.1
Pan troglodytes (chimpanzee)	TRAF1	XP_001158357.1
Bos taurus (cattle)	TRAF1	NP_001179730.1
Mus musculus (house mouse)	Traf1	NP_033447.2
Macaca mulatta (Rhesus monkey)	TRAF1	XP_001095862.1
Canis lupus familiaris (dog)	TRAF1	XP_855528.1
Rattus norvegicus (Norway rat)	Traf1	NP_001258169.1

Gene Ontology
Bibliography

Related articles in PubMed

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The viral TRAF protein (ORF111L) from infectious spleen and kidney necrosis virus interacts with TRADD and induces caspase 8-mediated apoptosis.
He BL, Yuan JM, Yang LY, Xie JF, Weng SP, Yu XQ, He JG
PloS one7(5)e37001(2012)

Characterization and expression analysis of TNFR-associated factor 1 (TRAF1) in grass carp Ctenopharyngodon idella.
Xu ZY, Sun BJ, Chang MX, Nie P
Veterinary immunology and immunopathology121(1-2)44-57(2008 Jan)

Conservation and divergence of gene families encoding components of innate immune response systems in zebrafish.
Stein C, Caccamo M, Laird G, Leptin M
Genome biology8(11)R251(2007)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following traf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the traf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31410	NM_001128381.1 Latest version!	Danio rerio TNF receptor-associated factor 1 (traf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

traf1 ( NM_001128381.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001121853.1 Danio rerio TNF receptor-associated factor 1 (traf1), mRNA.

Price & Availability↑

CloneID	ODa31410
Clone ID Related Accession (Same CDS sequence)	NM_001128381.1
Accession Version	NM_001128381.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1656bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1559318400000
Organism	Danio rerio(zebrafish)
Product	TNF receptor-associated factor 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR376844.12. On Jul 31, 2008 this sequence version replaced XM_001922216.1. ##Evidence-Data-START## Transcript exon combination :: GDQH01024900.1, GDQQ01020464.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCTTCTG GTTCAGCTTC AGACCCGTCG TTAAACGGTG TTTCGTCCAC ACCGGATGAG 
AACGAGTATC CGTCAGGTTT CCCTCAGAGC ATCTGCGATG AGGTGCCGAA AGATAAATAC 
TTGTGTAGCA ACTGCAATAA TGTTTTGAAT AAAGCGCGTC AAACGGTGTG CGGTCACCGA 
TACTGCCTCG CCTGCGTCAA CTGGCTGGTC AGAAACAACA AGGACCTAGT GTGCACAAAA 
TGTAAAGGAG AGGATTCCAA TGTTGAGAGT GACACTAGCG TACTGACTCC TAACCAATTC 
TTCAATGATG TGGCTATCAA TAAGGAAATT TTGGATCTGA AAGTTCACTG TGCTAACCAA 
GGCTGCCCCT GGAGAAGCAC CCTAAAAAAT TTTGAGGACC ACCAGAGTCA GTGTGAATAT 
GCCCTGATCC CTTGTAACAT TGGCTGTGGC ATAATGGTTC AGAGGAAGAC ACTGGCCACA 
CATCTGGAAA GCGGCTGTCC CAACAACAAG ACCGCCTGTC CCTCCTGTAC AAGTGTTCTG 
ACACCCAGAG AACTCCAGAA GCATGTATGT CCCAGTTCTG GTGATAAGAA GACAGCAAAG 
ACGGATAAAA AGCAAAAGAA TAATCAGCCG GCCAACTCAA AAAAGAAAGA ACCATGCATT 
TTCTCAGACG TTGGTTGTCC TTTTAAGGGC AACCCAGACA AAGTAAAAGA ACATGAGTCT 
TGCAGTCATG CGGGTCACCT GCAGCTTCTA CTGGACGTGA CCAGGGCTCT TCAGCGAACA 
CTGAACTCAG CAACTGAGCG AGTCTACCAG GACAGCCCTG TTTTTCTTGA GCCTGGACCA 
AATGGCTCTT CACTCGCTCC TCAGGCTGAT GGTGACATAG AAACGGATGG AGGAGATCCG 
GGAGTGAGTG ACAAGGCCTT CAGCCTCCAC GATGATCAGG TTGAGCTCGC CGCCGGCCAG 
CAGCTGGACG CCCTGCAGCA AAAAGTGCAG GTCATAGAGA ACATCATTTC CGCTCTGAAC 
CGAGAGGTAG AGAAGACACA GATCAGTGTG GTGGCAATGA ATAGAGACCA TTGCAACAGC 
CAGCAGATCA TTCAGCATTT GGAAGCTACG GTAGCGGAGC TGCAGCAGAG GCTGGTCAGG 
AAAGACATTC TCATCAGTTC TTTGCAGCAG TCTATCAGCG CCCAGCAGGA CGTCTCGTAT 
GATGGCACCT TTTACTGGCG GGTGTGTGAT GTCAGCCAGA AACAGAGAGA GGCTGCCAAC 
AGCCAAAAGA TCAGTCAGTA CTCACCAGCT TTCTACACCG CCAGGTATGG ATTTAAAGTG 
TGTTTGCGGC TCTATTTGAA CGGAGACGGA GCTGGAAAGG GATCACACAT CTCTCTTTTC 
TTTGTTATAA TGAAAGGAGA ATATGACCCC ATTCTCTCAT GGCCATTCAA ACACAAGGTA 
ACGTTCTTCC TCCTAGATCA AAACCAGAGG GAGCACGTCA TCGATGCTTT CCGTCCCGAC 
CTGTCCTCCA TGTCTTTCCA TCAGCCTGTC AGTGATATGA ATGTGGCCAG CGGCTGCCCC 
CTGTTCTTCC CTCTGAAGAA ACTGAGGTCG CCCAAACATG CTTACTGCAA AGACGACACC 
ATCTACATTA AGTGCGTGGT GGACACCTCT TCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001121853.1
CDS	378..2033
Translation	MASGSASDPSLNGVSSTPDENEYPSGFPQSICDEVPKDKYLCSNCNNVLNKARQTVCGHRYCLACVNWLVRNNKDLVCTKCKGEDSNVESDTSVLTPNQFFNDVAINKEILDLKVHCANQGCPWRSTLKNFEDHQSQCEYALIPCNIGCGIMVQRKTLATHLESGCPNNKTACPSCTSVLTPRELQKHVCPSSGDKKTAKTDKKQKNNQPANSKKKEPCIFSDVGCPFKGNPDKVKEHESCSHAGHLQLLLDVTRALQRTLNSATERVYQDSPVFLEPGPNGSSLAPQADGDIETDGGDPGVSDKAFSLHDDQVELAAGQQLDALQQKVQVIENIISALNREVEKTQISVVAMNRDHCNSQQIIQHLEATVAELQQRLVRKDILISSLQQSISAQQDVSYDGTFYWRVCDVSQKQREAANSQKISQYSPAFYTARYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSWPFKHKVTFFLLDQNQREHVIDAFRPDLSSMSFHQPVSDMNVASGCPLFFPLKKLRSPKHAYCKDDTIYIKCVVDTSS

Target ORF information:

RefSeq Version	NM_001128381.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio TNF receptor-associated factor 1 (traf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001128381.1

ORF Insert Sequence:

ATGGCTTCTG GTTCAGCTTC AGACCCGTCG TTAAACGGTG TTTCGTCCAC ACCGGATGAG 
AACGAGTATC CGTCAGGTTT CCCTCAGAGC ATCTGCGATG AGGTGCCGAA AGATAAATAC 
TTGTGTAGCA ACTGCAATAA TGTTTTGAAT AAAGCGCGTC AAACGGTGTG CGGTCACCGA 
TACTGCCTCG CCTGCGTCAA CTGGCTGGTC AGAAACAACA AGGACCTAGT GTGCACAAAA 
TGTAAAGGAG AGGATTCCAA TGTTGAGAGT GACACTAGCG TACTGACTCC TAACCAATTC 
TTCAATGATG TGGCTATCAA TAAGGAAATT TTGGATCTGA AAGTTCACTG TGCTAACCAA 
GGCTGCCCCT GGAGAAGCAC CCTAAAAAAT TTTGAGGACC ACCAGAGTCA GTGTGAATAT 
GCCCTGATCC CTTGTAACAT TGGCTGTGGC ATAATGGTTC AGAGGAAGAC ACTGGCCACA 
CATCTGGAAA GCGGCTGTCC CAACAACAAG ACCGCCTGTC CCTCCTGTAC AAGTGTTCTG 
ACACCCAGAG AACTCCAGAA GCATGTATGT CCCAGTTCTG GTGATAAGAA GACAGCAAAG 
ACGGATAAAA AGCAAAAGAA TAATCAGCCG GCCAACTCAA AAAAGAAAGA ACCATGCATT 
TTCTCAGACG TTGGTTGTCC TTTTAAGGGC AACCCAGACA AAGTAAAAGA ACATGAGTCT 
TGCAGTCATG CGGGTCACCT GCAGCTTCTA CTGGACGTGA CCAGGGCTCT TCAGCGAACA 
CTGAACTCAG CAACTGAGCG AGTCTACCAG GACAGCCCTG TTTTTCTTGA GCCTGGACCA 
AATGGCTCTT CACTCGCTCC TCAGGCTGAT GGTGACATAG AAACGGATGG AGGAGATCCG 
GGAGTGAGTG ACAAGGCCTT CAGCCTCCAC GATGATCAGG TTGAGCTCGC CGCCGGCCAG 
CAGCTGGACG CCCTGCAGCA AAAAGTGCAG GTCATAGAGA ACATCATTTC CGCTCTGAAC 
CGAGAGGTAG AGAAGACACA GATCAGTGTG GTGGCAATGA ATAGAGACCA TTGCAACAGC 
CAGCAGATCA TTCAGCATTT GGAAGCTACG GTAGCGGAGC TGCAGCAGAG GCTGGTCAGG 
AAAGACATTC TCATCAGTTC TTTGCAGCAG TCTATCAGCG CCCAGCAGGA CGTCTCGTAT 
GATGGCACCT TTTACTGGCG GGTGTGTGAT GTCAGCCAGA AACAGAGAGA GGCTGCCAAC 
AGCCAAAAGA TCAGTCAGTA CTCACCAGCT TTCTACACCG CCAGGTATGG ATTTAAAGTG 
TGTTTGCGGC TCTATTTGAA CGGAGACGGA GCTGGAAAGG GATCACACAT CTCTCTTTTC 
TTTGTTATAA TGAAAGGAGA ATATGACCCC ATTCTCTCAT GGCCATTCAA ACACAAGGTA 
ACGTTCTTCC TCCTAGATCA AAACCAGAGG GAGCACGTCA TCGATGCTTT CCGTCCCGAC 
CTGTCCTCCA TGTCTTTCCA TCAGCCTGTC AGTGATATGA ATGTGGCCAG CGGCTGCCCC 
CTGTTCTTCC CTCTGAAGAA ACTGAGGTCG CCCAAACATG CTTACTGCAA AGACGACACC 
ATCTACATTA AGTGCGTGGT GGACACCTCT TCCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The viral TRAF protein (ORF111L) from infectious spleen and kidney necrosis virus interacts with TRADD and induces caspase 8-mediated apoptosis.
PloS one7(5)e37001(2012)
He BL,Yuan JM,Yang LY,Xie JF,Weng SP,Yu XQ,He JG

Characterization and expression analysis of TNFR-associated factor 1 (TRAF1) in grass carp Ctenopharyngodon idella.
Veterinary immunology and immunopathology121(1-2)44-57(2008 Jan)
Xu ZY,Sun BJ,Chang MX,Nie P

Conservation and divergence of gene families encoding components of innate immune response systems in zebrafish.
Genome biology8(11)R251(2007)
Stein C,Caccamo M,Laird G,Leptin M