| Gene Symbol | hpca |
| Entrez Gene ID | 393696 |
| Full Name | hippocalcin |
| Synonyms | zgc:73126 |
| General protein information |
|
| Gene Type | protein-coding |
| Organism | Danio rerio(zebrafish) |
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hpca cDNA ORF clone, Danio rerio(zebrafish)
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Gene
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Clones
gRNAs
The following hpca gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the hpca cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
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Reference Sequences (Refseq)
CloneID ODa37124 Clone ID Related Accession (Same CDS sequence) XM_021468015.1 , NM_200723.1 Accession Version NM_200723.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 582bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector 
User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1548432000000 Organism Danio rerio(zebrafish) Product neuron-specific calcium-binding protein hippocalcin Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC059489.1. ##Evidence-Data-START## Transcript exon combination :: EH432632.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##
1
61
121
181
241
301
361
421
481
541ATGGGAAAAC AGAACAGCAA ACTCAGGCCT GAGATGCTAC AGGACCTGAG GGAGAACACA
GAGTTTACTG ACCATGAGCT GCAGGAGTGG TACAAGGGGT TTCTGAAAGA CTGTCCCAGT
GGACACTTGA ACGTCGAGGA GTTTAAGAAG ATCTATGCCA ACTTCTTCCC GTATGGTGAC
GCCTCGAAGT TCGCAGAGCA TGTCTTCCGT ACATTTGACA CCAACAACGA CGGCACCATC
GATTTCCGGG AGTTCATCAT TGCTCTGAGC GTGACGTCAC GGGGAAAACT GGAGCAGAAG
CTGAAGTGGG CCTTCAGCAT GTACGATCTG GATGGCAACG GTTACATCAG CCGCGAGGAA
ATGCTAGAGA TCGTGCAGGC CATTTATAAG ATGGTGTCTT CTGTGATGAA AATGCCTGAG
GATGAATCCA CACCAGAGAA GAGGACAGAT AAGATATTCA GACAAATGGA CCTGAACAAT
GATGGCAAGC TGTCTTTGGA AGAGTTCATA AAAGGTGCCA AAAGTGATCC CTCCATTGTG
CGGCTACTGC AGTGTGACCC CAGCAGCGCT TCGCAGTTTT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq NP_957017.1 CDS 228..809 Translation 
Target ORF information:
RefSeq Version NM_200723.1 Organism Danio rerio(zebrafish) Definition Danio rerio hippocalcin (hpca), mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK 
NM_200723.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541ATGGGAAAAC AGAACAGCAA ACTCAGGCCT GAGATGCTAC AGGACCTGAG GGAGAACACA
GAGTTTACTG ACCATGAGCT GCAGGAGTGG TACAAGGGGT TTCTGAAAGA CTGTCCCAGT
GGACACTTGA ACGTCGAGGA GTTTAAGAAG ATCTATGCCA ACTTCTTCCC GTATGGTGAC
GCCTCGAAGT TCGCAGAGCA TGTCTTCCGT ACATTTGACA CCAACAACGA CGGCACCATC
GATTTCCGGG AGTTCATCAT TGCTCTGAGC GTGACGTCAC GGGGAAAACT GGAGCAGAAG
CTGAAGTGGG CCTTCAGCAT GTACGATCTG GATGGCAACG GTTACATCAG CCGCGAGGAA
ATGCTAGAGA TCGTGCAGGC CATTTATAAG ATGGTGTCTT CTGTGATGAA AATGCCTGAG
GATGAATCCA CACCAGAGAA GAGGACAGAT AAGATATTCA GACAAATGGA CCTGAACAAT
GATGGCAAGC TGTCTTTGGA AGAGTTCATA AAAGGTGCCA AAAGTGATCC CTCCATTGTG
CGGCTACTGC AGTGTGACCC CAGCAGCGCT TCGCAGTTTT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID ODa37124 Clone ID Related Accession (Same CDS sequence) XM_021468015.1 , NM_200723.1 Accession Version XM_021468015.1 Latest version! Documents for ORF clone product in default vector Sequence Information ORF Nucleotide Sequence (Length: 582bp)
Protein sequence
SNPVector pcDNA3.1-C-(k)DYK or customized vector User ManualClone information Clone Map MSDSTag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags ORF Insert Method CloneEZ™ Seamless cloning technology Insert Structure linear Update Date 1497369600000 Organism Danio rerio(zebrafish) Product neuron-specific calcium-binding protein hippocalcin isoform X1 Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007130.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##
1
61
121
181
241
301
361
421
481
541ATGGGAAAAC AGAACAGCAA ACTCAGGCCT GAGATGCTAC AGGACCTGAG GGAGAACACA
GAGTTTACTG ACCATGAGCT GCAGGAGTGG TACAAGGGGT TTCTGAAAGA CTGTCCCAGT
GGACACTTGA ACGTCGAGGA GTTTAAGAAG ATCTATGCCA ACTTCTTCCC GTATGGTGAC
GCCTCGAAGT TCGCAGAGCA TGTCTTCCGT ACATTTGACA CCAACAACGA CGGCACCATC
GATTTCCGGG AGTTCATCAT TGCTCTGAGC GTGACGTCAC GGGGAAAACT GGAGCAGAAG
CTGAAGTGGG CCTTCAGCAT GTACGATCTG GATGGCAACG GTTACATCAG CCGCGAGGAA
ATGCTAGAGA TCGTGCAGGC CATTTATAAG ATGGTGTCTT CTGTGATGAA AATGCCTGAG
GATGAATCCA CACCAGAGAA GAGGACAGAT AAGATATTCA GACAAATGGA CCTGAACAAT
GATGGCAAGC TGTCTTTGGA AGAGTTCATA AAAGGTGCCA AAAGTGATCC CTCCATTGTG
CGGCTACTGC AGTGTGACCC CAGCAGCGCT TCGCAGTTTT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq XP_021323690.1 CDS 92..673 Translation
Target ORF information:
RefSeq Version XM_021468015.1 Organism Danio rerio(zebrafish) Definition Danio rerio hippocalcin (hpca), transcript variant X1, mRNA. Target ORF information:
Epitope DYKDDDDK Bacterial selection AMPR Mammalian selection NeoR Vector pcDNA3.1+/C-(K)DYK XM_021468015.1
ORF Insert Sequence:
1
61
121
181
241
301
361
421
481
541ATGGGAAAAC AGAACAGCAA ACTCAGGCCT GAGATGCTAC AGGACCTGAG GGAGAACACA
GAGTTTACTG ACCATGAGCT GCAGGAGTGG TACAAGGGGT TTCTGAAAGA CTGTCCCAGT
GGACACTTGA ACGTCGAGGA GTTTAAGAAG ATCTATGCCA ACTTCTTCCC GTATGGTGAC
GCCTCGAAGT TCGCAGAGCA TGTCTTCCGT ACATTTGACA CCAACAACGA CGGCACCATC
GATTTCCGGG AGTTCATCAT TGCTCTGAGC GTGACGTCAC GGGGAAAACT GGAGCAGAAG
CTGAAGTGGG CCTTCAGCAT GTACGATCTG GATGGCAACG GTTACATCAG CCGCGAGGAA
ATGCTAGAGA TCGTGCAGGC CATTTATAAG ATGGTGTCTT CTGTGATGAA AATGCCTGAG
GATGAATCCA CACCAGAGAA GAGGACAGAT AAGATATTCA GACAAATGGA CCTGAACAAT
GATGGCAAGC TGTCTTTGGA AGAGTTCATA AAAGGTGCCA AAAGTGATCC CTCCATTGTG
CGGCTACTGC AGTGTGACCC CAGCAGCGCT TCGCAGTTTT GAThe stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
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PubMed
Gene expression profiling of granule cells and Purkinje cells in the zebrafish cerebellum.
The Journal of comparative neurology525(7)1558-1585(2017 May)
Takeuchi M,Yamaguchi S,Sakakibara Y,Hayashi T,Matsuda K,Hara Y,Tanegashima C,Shimizu T,Kuraku S,Hibi M
Non-nuclear Pool of Splicing Factor SFPQ Regulates Axonal Transcripts Required for Normal Motor Development.
Neuron94(2)322-336.e5(2017 Apr)
Thomas-Jinu S,Gordon PM,Fielding T,Taylor R,Smith BN,Snowden V,Blanc E,Vance C,Topp S,Wong CH,Bielen H,Williams KL,McCann EP,Nicholson GA,Pan-Vazquez A,Fox AH,Bond CS,Talbot WS,Blair IP,Shaw CE,Houart C
Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 03)
Bayés À,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J
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