ORF » Species Summary » Zea mays » LOC542686 cDNA ORF clone

LOC542686 cDNA ORF clone, Zea mays

The following LOC542686 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542686 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OZa00497 NM_001114645.1
Latest version!		 Zea mays phytoene synthase 2 (LOC542686), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC542686 ( NM_001114645.1 ) cDNA ORF clone, Zea mays -> NP_001108117.1 Zea mays phytoene synthase 2 (LOC542686), mRNA.
    Price & Availability↑
    CloneID OZa00497
    Clone ID Related Accession (Same CDS sequence) NM_001114645.1
    Accession Version NM_001114645.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1209bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1551801600000
    Organism Zea mays
    Product phytoene synthase 2
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY773476.1. ##Evidence-Data-START## Transcript exon combination :: AY773476.1, BT039824.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCTGCGG GCTCGTCCGC GGTGTGGGCC GCGCAACACC CCGCCTGCAG CGGCGGCAAG 
    TTCCACCACC TGTCGCCGTC CCACTCCCAC TGCCGCCCGC GCCGCGCCCT CCAGACGCCG 
    CCCGCGCTCC CCGCGAGACG GAGCGGCGCC TCCCCGCCGC GCGCCAGCCT CGCCGCCGCC 
    GCGCCTGCGG TGGCGGTGAG GACGGCTTCG GAGGAGGCCG TGTACGAGGT GGTGCTGCGG 
    CAGGCGGCAC TCGTGGAGGC CGCGACGCCA CAGAGGCGCC GGACGCGGCA GCCGAGGTGG 
    GCGGAGGAAG AGGAGGAGGA GAGGGTCCTC GGCTGGGGCC TCCTCGGCGA CGCCTACGAC 
    CGCTGCGGCG AGGTCTGCGC CGAGTACGCC AAGACCTTTT ACCTCGGCAC GCAGCTCATG 
    ACTCCTGAGC GGCGCAAAGC CGTCTGGGCG ATCTACGTGT GGTGCAGAAG AACTGACGAG 
    CTAGTGGACG GTCCCAACGC GTCCTACATC ACGCCGACCG CTCTCGACCG CTGGGAGAAG 
    CGGCTGGAGG ATCTCTTTGA GGGCCGCCCG TACGACATGT ACGACGCCGC GCTCTCGGAC 
    ACCGTGTCCA AGTTCCCCGT CGATATCCAG CCGTTCAAAG ACATGGTCCA AGGAATGAGG 
    CTGGACCTGT GGAAGTCGAG GTACATGACC TTCGACGAGC TCTACCTCTA CTGCTACTAC 
    GTCGCCGGCA CCGTCGGCCT CATGACGGTG CCTGTCATGG GCATCGCTCC CGACTCCAAG 
    GCCTCGACCG AGAGCGTGTA CAATGCTGCT CTGGCTCTCG GCATCGCTAA CCAGCTGACG 
    AATATTCTCA GAGACGTGGG CGAAGATGCG AGGAGGGGGA GAATATACCT TCCTTTGGAC 
    GAGCTTGCGC AGGCAGGTCT CACGGAAGAG GACATATTCA GAGGGAAAGT GACCGGCAAG 
    TGGAGGAGGT TCATGAAGGG CCAGATCCAG CGTGCCAGGC TCTTCTTTGA TGAGGCGGAG 
    AAGGGCGTCA CCCATCTCGA CTCTGCTAGC AGATGGCCGG TGCTCGCGTC TCTGTGGCTG 
    TACAGGCAGA TCCTTGATGC CATTGAGGCA AACGACTACA ACAACTTCAC CAAGCGTGCG 
    TACGTCGGCA AGGCCAAGAA GCTGCTGTCG TTACCGCTTG CATATGCAAG GGCTGCGGTT 
    GCACCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001108117.1
    CDS1..1209
    Translation

    Target ORF information:

    RefSeq Version NM_001114645.1
    Organism Zea mays
    Definition Zea mays phytoene synthase 2 (LOC542686), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001114645.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGCTGCGG GCTCGTCCGC GGTGTGGGCC GCGCAACACC CCGCCTGCAG CGGCGGCAAG 
    TTCCACCACC TGTCGCCGTC CCACTCCCAC TGCCGCCCGC GCCGCGCCCT CCAGACGCCG 
    CCCGCGCTCC CCGCGAGACG GAGCGGCGCC TCCCCGCCGC GCGCCAGCCT CGCCGCCGCC 
    GCGCCTGCGG TGGCGGTGAG GACGGCTTCG GAGGAGGCCG TGTACGAGGT GGTGCTGCGG 
    CAGGCGGCAC TCGTGGAGGC CGCGACGCCA CAGAGGCGCC GGACGCGGCA GCCGAGGTGG 
    GCGGAGGAAG AGGAGGAGGA GAGGGTCCTC GGCTGGGGCC TCCTCGGCGA CGCCTACGAC 
    CGCTGCGGCG AGGTCTGCGC CGAGTACGCC AAGACCTTTT ACCTCGGCAC GCAGCTCATG 
    ACTCCTGAGC GGCGCAAAGC CGTCTGGGCG ATCTACGTGT GGTGCAGAAG AACTGACGAG 
    CTAGTGGACG GTCCCAACGC GTCCTACATC ACGCCGACCG CTCTCGACCG CTGGGAGAAG 
    CGGCTGGAGG ATCTCTTTGA GGGCCGCCCG TACGACATGT ACGACGCCGC GCTCTCGGAC 
    ACCGTGTCCA AGTTCCCCGT CGATATCCAG CCGTTCAAAG ACATGGTCCA AGGAATGAGG 
    CTGGACCTGT GGAAGTCGAG GTACATGACC TTCGACGAGC TCTACCTCTA CTGCTACTAC 
    GTCGCCGGCA CCGTCGGCCT CATGACGGTG CCTGTCATGG GCATCGCTCC CGACTCCAAG 
    GCCTCGACCG AGAGCGTGTA CAATGCTGCT CTGGCTCTCG GCATCGCTAA CCAGCTGACG 
    AATATTCTCA GAGACGTGGG CGAAGATGCG AGGAGGGGGA GAATATACCT TCCTTTGGAC 
    GAGCTTGCGC AGGCAGGTCT CACGGAAGAG GACATATTCA GAGGGAAAGT GACCGGCAAG 
    TGGAGGAGGT TCATGAAGGG CCAGATCCAG CGTGCCAGGC TCTTCTTTGA TGAGGCGGAG 
    AAGGGCGTCA CCCATCTCGA CTCTGCTAGC AGATGGCCGG TGCTCGCGTC TCTGTGGCTG 
    TACAGGCAGA TCCTTGATGC CATTGAGGCA AACGACTACA ACAACTTCAC CAAGCGTGCG 
    TACGTCGGCA AGGCCAAGAA GCTGCTGTCG TTACCGCTTG CATATGCAAG GGCTGCGGTT 
    GCACCATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The B73 maize genome: complexity, diversity, and dynamics.
    Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
    Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK


    Gene duplication in the carotenoid biosynthetic pathway preceded evolution of the grasses.
    Plant physiology135(3)1776-83(2004 Jul)
    Gallagher CE,Matthews PD,Li F,Wurtzel ET


    Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci.
    The Plant cell15(8)1795-806(2003 Aug)
    Palaisa KA,Morgante M,Williams M,Rafalski A


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