| Gene Symbol | LOC542479 |
| Entrez Gene ID | 542479 |
| Full Name | phosphoenolpyruvate carboxylase 7 |
| Synonyms | GRMZM2G069542,Ppc1C,pepcZm2A |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » LOC542479 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| NM_001112033.1 | NP_001105503.1 | phosphoenolpyruvate carboxylase |
| NM_001112033.2 | NP_001105503.1 | phosphoenolpyruvate carboxylase |
The B73 maize genome: complexity, diversity, and dynamics.
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
The regulatory role of residues 226-232 in phosphoenolpyruvate carboxylase from maize.
Yuan J, Sayegh J, Mendez J, Sward L, Sanchez N, Sanchez S, Waldrop G, Grover S
Photosynthesis research88(1)73-81(2006 Apr)
Characterization of the maize endosperm transcriptome and its comparison to the rice genome.
Lai J, Dey N, Kim CS, Bharti AK, Rudd S, Mayer KF, Larkins BA, Becraft P, Messing J
Genome research14(10A)1932-7(2004 Oct)
Phosphoenolpyruvate carboxylase prevalent in maize roots: isolation of a cDNA clone and its use for analyses of the gene and gene expression.
Kawamura T, Shigesada K, Yanagisawa S, Izui K
Journal of biochemistry107(1)165-8(1990 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC542479 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542479 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa05890 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001112033.1 | |
| Accession Version | NM_001112033.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2883bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1492531200000 | |
| Organism | Zea mays | |
| Product | phosphoenolpyruvate carboxylase | |
| Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB012228.1. ##Evidence-Data-START## Transcript exon combination :: AB012228.1, SRR3147024.25154.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN03603544 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCCGGAGC GGCACCAGTC CATCGACGCG CAGCTGCGGC TGCTGGCCCC CGGGAAGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001105503.1 |
| CDS | 198..3080 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001112033.1 |
1 | ATGCCGGAGC GGCACCAGTC CATCGACGCG CAGCTGCGGC TGCTGGCCCC CGGGAAGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa70633 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001112033.2 | |
| Accession Version | NM_001112033.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2883bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1551715200000 | |
| Organism | Zea mays | |
| Product | phosphoenolpyruvate carboxylase | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EE041617.2, CD439953.1, AY109352.1, CA989174.1, CA452447.1, FK989379.1 and DN209714.1. On May 24, 2017 this sequence version replaced NM_001112033.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147030.377.1, SRR3147030.3780.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN03603544 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGCCGGAGC GGCACCAGTC CATCGACGCG CAGCTGCGGC TGCTGGCCCC CGGGAAGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001105503.1 |
| CDS | 165..3047 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001112033.2 |
1 | ATGCCGGAGC GGCACCAGTC CATCGACGCG CAGCTGCGGC TGCTGGCCCC CGGGAAGGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The B73 maize genome: complexity, diversity, and dynamics. |
The regulatory role of residues 226-232 in phosphoenolpyruvate carboxylase from maize. |
Characterization of the maize endosperm transcriptome and its comparison to the rice genome. |
Phosphoenolpyruvate carboxylase prevalent in maize roots: isolation of a cDNA clone and its use for analyses of the gene and gene expression. |