LOC542333 cDNA ORF clone, Zea mays

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC542333
Entrez Gene ID	542333
Full Name	cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3
Synonyms	GAPC,GRMZM2G071630,gpc3
Gene Type	protein-coding
Organism	Zea mays

mRNA and Protein(s)

mRNA	Protein	Name
NM_001111915.2	NP_001105385.1	glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The B73 maize genome: complexity, diversity, and dynamics.
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, Strong C, Delehaunty K, Fronick C, Courtney B, Rock SM, Belter E, Du F, Kim K, Abbott RM, Cotton M, Levy A, Marchetto P, Ochoa K, Jackson SM, Gillam B, Chen W, Yan L, Higginbotham J, Cardenas M, Waligorski J, Applebaum E, Phelps L, Falcone J, Kanchi K, Thane T, Scimone A, Thane N, Henke J, Wang T, Ruppert J, Shah N, Rotter K, Hodges J, Ingenthron E, Cordes M, Kohlberg S, Sgro J, Delgado B, Mead K, Chinwalla A, Leonard S, Crouse K, Collura K, Kudrna D, Currie J, He R, Angelova A, Rajasekar S, Mueller T, Lomeli R, Scara G, Ko A, Delaney K, Wissotski M, Lopez G, Campos D, Braidotti M, Ashley E, Golser W, Kim H, Lee S, Lin J, Dujmic Z, Kim W, Talag J, Zuccolo A, Fan C, Sebastian A, Kramer M, Spiegel L, Nascimento L, Zutavern T, Miller B, Ambroise C, Muller S, Spooner W, Narechania A, Ren L, Wei S, Kumari S, Faga B, Levy MJ, McMahan L, Van Buren P, Vaughn MW, Ying K, Yeh CT, Emrich SJ, Jia Y, Kalyanaraman A, Hsia AP, Barbazuk WB, Baucom RS, Brutnell TP, Carpita NC, Chaparro C, Chia JM, Deragon JM, Estill JC, Fu Y, Jeddeloh JA, Han Y, Lee H, Li P, Lisch DR, Liu S, Liu Z, Nagel DH, McCann MC, SanMiguel P, Myers AM, Nettleton D, Nguyen J, Penning BW, Ponnala L, Schneider KL, Schwartz DC, Sharma A, Soderlund C, Springer NM, Sun Q, Wang H, Waterman M, Westerman R, Wolfgruber TK, Yang L, Yu Y, Zhang L, Zhou S, Zhu Q, Bennetzen JL, Dawe RK, Jiang J, Jiang N, Presting GG, Wessler SR, Aluru S, Martienssen RA, Clifton SW, McCombie WR, Wing RA, Wilson RK
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)

Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings.
Jia J, Fu J, Zheng J, Zhou X, Huai J, Wang J, Wang M, Zhang Y, Chen X, Zhang J, Zhao J, Su Z, Lv Y, Wang G
The Plant journal : for cell and molecular biology48(5)710-27(2006 Dec)

Molecular characterization and promoter analysis of the maize cytosolic glyceraldehyde 3-phosphate dehydrogenase gene family and its expression during anoxia.
Manjunath S, Sachs MM
Plant molecular biology33(1)97-112(1997 Jan)

The maize cytosolic glyceraldehyde-3-phosphate dehydrogenase gene family: organ-specific expression and genetic analysis.
Russell DA, Sachs MM
Molecular & general genetics : MGG229(2)219-28(1991 Oct)

Differential expression and sequence analysis of the maize glyceraldehyde-3-phosphate dehydrogenase gene family.
Russell DA, Sachs MM
The Plant cell1(8)793-803(1989 Aug)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC542333 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC542333 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OZa22516	NM_001111915.2 Latest version!	Zea mays cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 (LOC542333), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC542333 ( NM_001111915.2 ) cDNA ORF clone, Zea mays -> NP_001105385.1 Zea mays cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 (LOC542333), mRNA.

Price & Availability↑

CloneID	OZa22516
Clone ID Related Accession (Same CDS sequence)	NM_001111915.2
Accession Version	NM_001111915.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1014bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1577462400000
Organism	Zea mays
Product	glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FL093159.1, CA829632.1, FL093092.1, DN229502.1 and FL093134.1. On or before Mar 12, 2016 this sequence version replaced XM_008679566.1, NM_001111915.1. ##Evidence-Data-START## Transcript exon combination :: SRR3147022.13022.1, SRR3147022.17110.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END##

ATGGCCAAGA TCAAGATCGG GATCAATGGG TTTGGCAGGA TCGGAAGGCT GGTGGCCAGG 
GTGGCCCTGC AGAGCGACGA CGTCGAGCTC GTCGCCGTGA ACGACCCCTT CATCAGCACC 
GATTACATGA CCTACATGTT CAAGTATGAC ACTGTGCACG GACAGTGGAA GCACCATGAG 
GTCAAGGTGA AGGACTCCAA GACCCTTCTC TTTGGTGAGA AGGAGGTTGC TGTGTTTGGC 
TGCAGGAACC CTGAGGAGAT CCCATGGGGT TCGGTTGGCG CTGAATATGT TGTTGAGTCT 
ACTGGTGTTT TCACTGACCA GGAGAAGGCT GCAGCTCACT TGAAGGGTGG TGCCAAGAAG 
GTTGTCATTT CTGCTCCTAG CAAGGATGCC CCCATGTTCG TTGTTGGTGT CAACGAGAAG 
GAGTACAAGT CTGACATCAA CATTGTCTCT AATGCTAGCT GCACAACCAA CTGCCTTGCT 
CCGCTTGCTA AGGTCATCAA TGACAAGTTC GGTATTGTTG AGGGTCTGAT GACCACTGTT 
CATGCCATCA CTGCTACCCA GAAGACTGTT GATGGGCCCT CATCTAAGGA CTGGAGGGGT 
GGAAGGGCTG CTAGTTTCAA CATCATTCCC AGCAGCACTG GAGCTGCTAA GGCTGTTGGC 
AAAGTGCTTC CTGTCCTCAA TGGAAAATTG ACTGGAATGT CTTTCCGTGT CCCAACTGTC 
GATGTTTCTG TTGTTGATCT GACTGTTAGG CTTGAGAAGT CTGCCACCTA TGATGAGATC 
AAGGCTGCGG TCAAGGCCGA GGCAGAGGGT AGCCTCAAGG GCATTCTGGG TTATGTCGAG 
GAGGACCTTG TTTCCACCGA TTTCCAGGGT GACAGCAGGT CTAGCATCTT TGATGCGAAG 
GCTGGCATTG CCTTGAACGG CAACTTTGTG AAGCTTGTGT CCTGGTACGA CAACGAGTGG 
GGATACAGCA CCCGAGTGGT CGACCTGATC CGCCACATGA ACAGCACCAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001105385.1
CDS	228..1241
Translation	MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFISTDYMTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWGSVGAEYVVESTGVFTDQEKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKSDINIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSATYDEIKAAVKAEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK

Target ORF information:

RefSeq Version	NM_001111915.2
Organism	Zea mays
Definition	Zea mays cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 (LOC542333), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001111915.2

ORF Insert Sequence:

ATGGCCAAGA TCAAGATCGG GATCAATGGG TTTGGCAGGA TCGGAAGGCT GGTGGCCAGG 
GTGGCCCTGC AGAGCGACGA CGTCGAGCTC GTCGCCGTGA ACGACCCCTT CATCAGCACC 
GATTACATGA CCTACATGTT CAAGTATGAC ACTGTGCACG GACAGTGGAA GCACCATGAG 
GTCAAGGTGA AGGACTCCAA GACCCTTCTC TTTGGTGAGA AGGAGGTTGC TGTGTTTGGC 
TGCAGGAACC CTGAGGAGAT CCCATGGGGT TCGGTTGGCG CTGAATATGT TGTTGAGTCT 
ACTGGTGTTT TCACTGACCA GGAGAAGGCT GCAGCTCACT TGAAGGGTGG TGCCAAGAAG 
GTTGTCATTT CTGCTCCTAG CAAGGATGCC CCCATGTTCG TTGTTGGTGT CAACGAGAAG 
GAGTACAAGT CTGACATCAA CATTGTCTCT AATGCTAGCT GCACAACCAA CTGCCTTGCT 
CCGCTTGCTA AGGTCATCAA TGACAAGTTC GGTATTGTTG AGGGTCTGAT GACCACTGTT 
CATGCCATCA CTGCTACCCA GAAGACTGTT GATGGGCCCT CATCTAAGGA CTGGAGGGGT 
GGAAGGGCTG CTAGTTTCAA CATCATTCCC AGCAGCACTG GAGCTGCTAA GGCTGTTGGC 
AAAGTGCTTC CTGTCCTCAA TGGAAAATTG ACTGGAATGT CTTTCCGTGT CCCAACTGTC 
GATGTTTCTG TTGTTGATCT GACTGTTAGG CTTGAGAAGT CTGCCACCTA TGATGAGATC 
AAGGCTGCGG TCAAGGCCGA GGCAGAGGGT AGCCTCAAGG GCATTCTGGG TTATGTCGAG 
GAGGACCTTG TTTCCACCGA TTTCCAGGGT GACAGCAGGT CTAGCATCTT TGATGCGAAG 
GCTGGCATTG CCTTGAACGG CAACTTTGTG AAGCTTGTGT CCTGGTACGA CAACGAGTGG 
GGATACAGCA CCCGAGTGGT CGACCTGATC CGCCACATGA ACAGCACCAA GTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The B73 maize genome: complexity, diversity, and dynamics.
Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK

Annotation and expression profile analysis of 2073 full-length cDNAs from stress-induced maize (Zea mays L.) seedlings.
The Plant journal : for cell and molecular biology48(5)710-27(2006 Dec)
Jia J,Fu J,Zheng J,Zhou X,Huai J,Wang J,Wang M,Zhang Y,Chen X,Zhang J,Zhao J,Su Z,Lv Y,Wang G

Molecular characterization and promoter analysis of the maize cytosolic glyceraldehyde 3-phosphate dehydrogenase gene family and its expression during anoxia.
Plant molecular biology33(1)97-112(1997 Jan)
Manjunath S,Sachs MM

The maize cytosolic glyceraldehyde-3-phosphate dehydrogenase gene family: organ-specific expression and genetic analysis.
Molecular & general genetics : MGG229(2)219-28(1991 Oct)
Russell DA,Sachs MM

Differential expression and sequence analysis of the maize glyceraldehyde-3-phosphate dehydrogenase gene family.
The Plant cell1(8)793-803(1989 Aug)
Russell DA,Sachs MM