LOC100284842 cDNA ORF clone, Zea mays

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100284842
Entrez Gene ID	100284842
Full Name	Pentatricopeptide repeat-containing protein ELI1 chloroplastic
Gene Type	protein-coding
Organism	Zea mays

mRNA and Protein(s)

mRNA	Protein	Name
NM_001157737.2	NP_001151209.2	uncharacterized protein LOC100284842
NM_001157737.1	NP_001151209.1	alanine aminotransferase 2
XM_023300535.1	XP_023156303.1	uncharacterized protein LOC100284842 isoform X1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)

Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.
Vega-Arreguín JC, Ibarra-Laclette E, Jiménez-Moraila B, Martínez O, Vielle-Calzada JP, Herrera-Estrella L, Herrera-Estrella A
BMC genomics10299(2009 Jul)

Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LOC100284842 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100284842 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OZa15774	NM_001157737.1 Latest version!	Zea mays alanine aminotransferase 2 (LOC100284842), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
OZa68891	XM_023300535.1 Latest version!	Zea mays Pentatricopeptide repeat-containing protein ELI1 chloroplastic (LOC100284842), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
OZa70362	NM_001157737.2 Latest version!	Zea mays uncharacterized LOC100284842 (LOC100284842), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100284842 ( NM_001157737.1 ) cDNA ORF clone, Zea mays -> NP_001151209.1 Zea mays alanine aminotransferase 2 (LOC100284842), mRNA.

Price & Availability↑

CloneID	OZa15774
Clone ID Related Accession (Same CDS sequence)	NM_001157737.1
Accession Version	NM_001157737.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1492531200000
Organism	Zea mays
Product	alanine aminotransferase 2
Comment	PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU969863.1. ##Evidence-Data-START## Transcript exon combination :: EU969863.1, SRR3147028.9909.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END##

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGATGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT AGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAA 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCACCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCGATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGCAA GTCCATCCAT 
GAATCTTTGA GGAGGAGAGC ACGCATGATG ACAGATGGTT TCAACAGTTG CCGAAACGTC 
GTGTGCAATT TCACTGAAGG AGCTATGTAC TCTTTCCCCC AAATACGTCT GCCACCGAGA 
GCTATTGAGG CGGCAAGAAG AGCCGGCAAA TCAGCGGACG TCTTCTACTG CCTCAAGCTC 
CTGGAGGCGA CAGGAATCTC CACTGTTCCG GGCTCTGGTT TTGGGCAAAA GGAAGGGGTG 
TTCCACCTTC GGACCACTAT CCTTCCAGCG GAGGAAGACT TCCCTGCCAT CATGTCGAGC 
TTCAAGAAGT TCAACGACTC GTTCATGGAG CAGTACGAGG GCTACTCCAG GCTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001151209.1
CDS	115..1551
Translation	MARKPLDYEELNENVKRVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPHVGLMFPADAIARAKHYLAMAPGGLGAYSDSRGIPGIRKEVADFIHKRDGYPSDPELIYLTDGASKGVMQILNTIIRNEMDGILVPVPQYPLYSATISLYGGSLVPYYLEEEANWSLDFVNIRQTVAEARSKGISVRAMVMINPGNPTGQCLSEANIKELLQFCYHENLVLLADEVYQQNIYQDERPFISARKVMFDMGPPISSELQVVSFHTVSKGYWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGVMVNPPKPGDISYLKFAAESKSIHESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRAIEAARRAGKSADVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPAIMSSFKKFNDSFMEQYEGYSRL

Target ORF information:

RefSeq Version	NM_001157737.1
Organism	Zea mays
Definition	Zea mays alanine aminotransferase 2 (LOC100284842), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001157737.1

ORF Insert Sequence:

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGATGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT AGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAA 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCACCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCGATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGCAA GTCCATCCAT 
GAATCTTTGA GGAGGAGAGC ACGCATGATG ACAGATGGTT TCAACAGTTG CCGAAACGTC 
GTGTGCAATT TCACTGAAGG AGCTATGTAC TCTTTCCCCC AAATACGTCT GCCACCGAGA 
GCTATTGAGG CGGCAAGAAG AGCCGGCAAA TCAGCGGACG TCTTCTACTG CCTCAAGCTC 
CTGGAGGCGA CAGGAATCTC CACTGTTCCG GGCTCTGGTT TTGGGCAAAA GGAAGGGGTG 
TTCCACCTTC GGACCACTAT CCTTCCAGCG GAGGAAGACT TCCCTGCCAT CATGTCGAGC 
TTCAAGAAGT TCAACGACTC GTTCATGGAG CAGTACGAGG GCTACTCCAG GCTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100284842 ( XM_023300535.1 ) cDNA ORF clone, Zea mays -> XP_023156303.1 Zea mays Pentatricopeptide repeat-containing protein ELI1 chloroplastic (LOC100284842), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OZa68891
Clone ID Related Accession (Same CDS sequence)	XM_023300535.1
Accession Version	XM_023300535.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1437bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1513440000000
Organism	Zea mays
Product	uncharacterized protein LOC100284842 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGACGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT TGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAG 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCGCCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCAATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGCAA GTCCATCCAT 
GAATCTTTGA GGAGGAGAGC ACGCATGATG ACAGATGGTT TCAACAGTTG CCGAAACGTC 
GTGTGCAATT TCACTGAAGG AGCTATGTAC TCTTTCCCCC AAATACGTCT GCCACCGAGA 
GCTATTGAGG CGGCAAGAAG AGCCGGCAAA TCAGCGGACG TCTTCTACTG CCTCAAGCTC 
CTGGAGGCGA CAGGAATCTC CACTGTCCCG GGCTCTGGTT TTGGGCAAAA GGAAGGGGTG 
TTCCACCTTC GGACCACTAT CCTTCCAGCG GAGGAAGACT TCCCTGCCAT CATGTCGAGC 
TTCAAGAAGT TCAACGACTC GTTCATGGAA CAGTACGAGG GCTACTCCAG GCTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_023156303.1
CDS	153..1589
Translation	MARKPLDYEELNENVKRVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPHVGLMFPADAIARAKHYLAMAPGGLGAYSDSRGIPGIRKEVADFIHKRDGYPSDPELIYLTDGASKGVMQILNTIIRNEMDGILVPVPQYPLYSATISLYGGSLVPYYLEEEANWSLDFVNIRQTVAEARSKGISVRAMVMINPGNPTGQCLSEANIKELLQFCYHENLVLLADEVYQQNIYQDERPFISARKVMFDMGPPISSELQVVSFHTVSKGYWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGVMVNPPKPGDISYLKFAAESKSIHESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRAIEAARRAGKSADVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPAIMSSFKKFNDSFMEQYEGYSRL

Target ORF information:

RefSeq Version	XM_023300535.1
Organism	Zea mays
Definition	Zea mays Pentatricopeptide repeat-containing protein ELI1 chloroplastic (LOC100284842), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_023300535.1

ORF Insert Sequence:

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGACGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT TGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAG 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCGCCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCAATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGCAA GTCCATCCAT 
GAATCTTTGA GGAGGAGAGC ACGCATGATG ACAGATGGTT TCAACAGTTG CCGAAACGTC 
GTGTGCAATT TCACTGAAGG AGCTATGTAC TCTTTCCCCC AAATACGTCT GCCACCGAGA 
GCTATTGAGG CGGCAAGAAG AGCCGGCAAA TCAGCGGACG TCTTCTACTG CCTCAAGCTC 
CTGGAGGCGA CAGGAATCTC CACTGTCCCG GGCTCTGGTT TTGGGCAAAA GGAAGGGGTG 
TTCCACCTTC GGACCACTAT CCTTCCAGCG GAGGAAGACT TCCCTGCCAT CATGTCGAGC 
TTCAAGAAGT TCAACGACTC GTTCATGGAA CAGTACGAGG GCTACTCCAG GCTGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100284842 ( NM_001157737.2 ) cDNA ORF clone, Zea mays -> NP_001151209.2 Zea mays uncharacterized LOC100284842 (LOC100284842), mRNA.

Price & Availability↑

CloneID	OZa70362
Clone ID Related Accession (Same CDS sequence)	NM_001157737.2
Accession Version	NM_001157737.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1512bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1548086400000
Organism	Zea mays
Product	uncharacterized protein LOC100284842
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from LPUQ01002413.1, BG264910.1, BG410568.1, BT037946.1 and AY108756.1. On Jul 7, 2017 this sequence version replaced NM_001157737.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN01096209 [ECO:0000348] ##Evidence-Data-END##

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGACGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT TGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAG 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCGCCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCAATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGGTT AAACATGCTG 
CCCCTCAGAA GTTTTAGCCT GCCTCCAGTT TCAACAGAAA AAATGGACCT TTGCGAGATA 
TTCAAGTCCA TCCATGAATC TTTGAGGAGG AGAGCACGCA TGATGACAGA TGGTTTCAAC 
AGTTGCCGAA ACGTCGTGTG CAATTTCACT GAAGGAGCTA TGTACTCTTT CCCCCAAATA 
CGTCTGCCAC CGAGAGCTAT TGAGGCGGCA AGAAGAGCCG GCAAATCAGC GGACGTCTTC 
TACTGCCTCA AGCTCCTGGA GGCGACAGGA ATCTCCACTG TCCCGGGCTC TGGTTTTGGG 
CAAAAGGAAG GGGTGTTCCA CCTTCGGACC ACTATCCTTC CAGCGGAGGA AGACTTCCCT 
GCCATCATGT CGAGCTTCAA GAAGTTCAAC GACTCGTTCA TGGAACAGTA CGAGGGCTAC 
TCCAGGCTGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001151209.2
CDS	85..1596
Translation	MARKPLDYEELNENVKRVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPHVGLMFPADAIARAKHYLAMAPGGLGAYSDSRGIPGIRKEVADFIHKRDGYPSDPELIYLTDGASKGVMQILNTIIRNEMDGILVPVPQYPLYSATISLYGGSLVPYYLEEEANWSLDFVNIRQTVAEARSKGISVRAMVMINPGNPTGQCLSEANIKELLQFCYHENLVLLADEVYQQNIYQDERPFISARKVMFDMGPPISSELQVVSFHTVSKGYWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGVMVNPPKPGDISYLKFAAERLNMLPLRSFSLPPVSTEKMDLCEIFKSIHESLRRRARMMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRAIEAARRAGKSADVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDFPAIMSSFKKFNDSFMEQYEGYSRL

Target ORF information:

RefSeq Version	NM_001157737.2
Organism	Zea mays
Definition	Zea mays uncharacterized LOC100284842 (LOC100284842), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001157737.2

ORF Insert Sequence:

ATGGCGAGGA AACCTCTCGA CTACGAGGAG CTGAACGAGA ACGTCAAGAG GGTGCAGTAC 
GCGGTGCGCG GGGAGCTGTA CCTCCGCGCC TCCGAGCTGC AGAAGGAGGG CAAGAAGATC 
ATCTTCACCA ACGTCGGCAA CCCGCACGCC CTCGGCCAGA AACCGCTCAC CTTCCCGCGC 
CAGGTGGTGG CGCTGTGCCA GGCTCCGTTC CTCCTCGACG ATCCCCACGT CGGCCTCATG 
TTCCCGGCGG ACGCCATCGC TAGGGCCAAG CACTATCTCG CCATGGCGCC CGGCGGTCTA 
GGTGCGTACA GTGACTCCCG CGGCATCCCG GGAATCAGGA AGGAAGTTGC CGACTTCATC 
CACAAGCGTG ATGGATATCC CAGTGATCCG GAACTCATCT ACCTCACAGA CGGTGCCAGC 
AAAGGTGTGA TGCAGATCCT GAACACCATC ATTAGAAACG AGATGGACGG GATCTTGGTC 
CCTGTTCCTC AGTACCCACT TTATTCCGCC ACCATTTCCC TCTATGGTGG TTCTCTGGTC 
CCGTACTACT TGGAAGAAGA GGCTAACTGG AGCCTCGACT TTGTGAATAT CCGGCAAACA 
GTGGCGGAGG CACGGTCCAA GGGAATCTCT GTTCGAGCGA TGGTGATGAT AAATCCAGGA 
AATCCCACTG GCCAATGCCT TAGTGAAGCG AATATAAAGG AACTTCTGCA ATTTTGCTAC 
CATGAAAACT TAGTTCTGCT TGCAGATGAA GTGTATCAAC AGAACATTTA TCAAGATGAG 
CGGCCATTTA TAAGCGCAAG AAAGGTTATG TTCGACATGG GTCCGCCAAT AAGCAGTGAG 
CTTCAGGTTG TTTCTTTCCA CACTGTGTCG AAAGGGTACT GGGGAGAGTG CGGACAACGT 
GGTGGATACT TCGAAATGAC AAATCTTCCT CCCAAGACAG TAGATGAGAT CTACAAGGTT 
GCATCAATAG CACTGAGTCC AAACGTTCCT GGGCAAATTT TTATGGGAGT AATGGTTAAC 
CCTCCTAAAC CTGGAGATAT CTCGTACCTG AAGTTCGCTG CTGAAAGGTT AAACATGCTG 
CCCCTCAGAA GTTTTAGCCT GCCTCCAGTT TCAACAGAAA AAATGGACCT TTGCGAGATA 
TTCAAGTCCA TCCATGAATC TTTGAGGAGG AGAGCACGCA TGATGACAGA TGGTTTCAAC 
AGTTGCCGAA ACGTCGTGTG CAATTTCACT GAAGGAGCTA TGTACTCTTT CCCCCAAATA 
CGTCTGCCAC CGAGAGCTAT TGAGGCGGCA AGAAGAGCCG GCAAATCAGC GGACGTCTTC 
TACTGCCTCA AGCTCCTGGA GGCGACAGGA ATCTCCACTG TCCCGGGCTC TGGTTTTGGG 
CAAAAGGAAG GGGTGTTCCA CCTTCGGACC ACTATCCTTC CAGCGGAGGA AGACTTCCCT 
GCCATCATGT CGAGCTTCAA GAAGTTCAAC GACTCGTTCA TGGAACAGTA CGAGGGCTAC 
TCCAGGCTGT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
PLoS genetics5(11)e1000740(2009 Nov)
Soderlund C,Descour A,Kudrna D,Bomhoff M,Boyd L,Currie J,Angelova A,Collura K,Wissotski M,Ashley E,Morrow D,Fernandes J,Walbot V,Yu Y

Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.
BMC genomics10299(2009 Jul)
Vega-Arreguín JC,Ibarra-Laclette E,Jiménez-Moraila B,Martínez O,Vielle-Calzada JP,Herrera-Estrella L,Herrera-Estrella A

Insights into corn genes derived from large-scale cDNA sequencing.
Plant molecular biology69(1-2)179-94(2009 Jan)
Alexandrov NN,Brover VV,Freidin S,Troukhan ME,Tatarinova TV,Zhang H,Swaller TJ,Lu YP,Bouck J,Flavell RB,Feldmann KA

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Plant physiology134(4)1317-26(2004 Apr)
Gardiner J,Schroeder S,Polacco ML,Sanchez-Villeda H,Fang Z,Morgante M,Landewe T,Fengler K,Useche F,Hanafey M,Tingey S,Chou H,Wing R,Soderlund C,Coe EH Jr

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LOC100284842 cDNA ORF clone, Zea mays

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