| Gene Symbol | EMB1417 |
| Entrez Gene ID | 100282749 |
| Full Name | Pentatricopeptide repeat-containing protein chloroplastic |
| Synonyms | GRMZM2G000361 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » EMB1417 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| NM_001155655.1 | NP_001149127.1 | uncharacterized protein LOC100282749 |
| XM_020540534.2 | XP_020396123.1 | uncharacterized protein LOC100282749 isoform X2 |
| XM_020540533.1 | XP_020396122.1 | uncharacterized protein LOC100282749 isoform X1 |
| XM_020540533.2 | XP_020396122.1 | uncharacterized protein LOC100282749 isoform X1 |
| XM_020540534.1 | XP_020396123.1 | uncharacterized protein LOC100282749 isoform X2 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following EMB1417 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the EMB1417 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa18107 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001155655.1 | |
| Accession Version | NM_001155655.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 750bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1556812800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100282749 | |
| Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from EU962180.1. ##Evidence-Data-START## Transcript exon combination :: EU962180.1, BT067680.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001149127.1 |
| CDS | 210..959 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001155655.1 |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa63861 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540533.1 , XM_020540533.2 | |
| Accession Version | XM_020540533.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100282749 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020396122.1 |
| CDS | 217..993 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540533.1 |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa63861 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540533.1 , XM_020540533.2 | |
| Accession Version | XM_020540533.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 777bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100282749 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020540533.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020396122.1 |
| CDS | 222..998 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540533.2 |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa63862 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540534.2 , XM_020540534.1 | |
| Accession Version | XM_020540534.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100282749 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020540534.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020396123.1 |
| CDS | 224..829 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540534.2 |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa63862 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020540534.2 , XM_020540534.1 | |
| Accession Version | XM_020540534.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 606bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100282749 isoform X2 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024465.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020396123.1 |
| CDS | 217..822 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020540534.1 |
1 | ATGGCGGGAG CCTTCGCTTT CCGCCTCGTG CCTCGCCTCG CCGCAGAGCC GGCGGCGAGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |