Gene Symbol | HCRT |
Entrez Gene ID | 397305 |
Full Name | hypocretin neuropeptide precursor |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
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ORF » Species Summary » Sus scrofa » HCRT cDNA ORF clone
Gene Symbol | HCRT |
Entrez Gene ID | 397305 |
Full Name | hypocretin neuropeptide precursor |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_013980951.1 | XP_013836405.1 | orexin isoform X1 |
XM_013980950.1 | XP_013836404.1 | orexin isoform X1 |
XM_013980949.1 | XP_013836403.1 | orexin isoform X1 |
NM_214156.2 | NP_999321.1 | orexin precursor |
XM_021066225.1 | XP_020921884.1 | orexin isoform X1 |
Orexin A modulates endocrine function and viability of porcine pancreatic islets.
Sassek M, Pruszynska-Oszmalek E, Nowak KW
Journal of physiology and pharmacology : an official journal of the Polish Physiological Society68(6)815-821(2017 Dec)
Expression of orexin A and B in the porcine hypothalamus during the oestrous cycle.
Maleszka A, Smolinska N, Nitkiewicz A, Kiezun M, Chojnowska K, Dobrzyn K, Jazowska J, Kaminski T
Journal of physiology and pharmacology : an official journal of the Polish Physiological Society64(1)55-63(2013 Feb)
Changes in plasma orexin A and orexin B concentrations during the estrous cycle of the pig.
Kaminski T, Nitkiewicz A, Smolinska N
Peptides39175-7(2013 Jan)
Differential gene expression and immune localization of the orexin system in the major salivary glands of pigs.
Dall'Aglio C, Zannoni A, Mercati F, Forni M, Bacci ML, Boiti C
Regulatory peptides172(1-3)51-7(2011 Dec)
Immunohistochemical evidence of Orexin-A in the pancreatic beta cells of domestic animals.
Dall'Aglio C, Pedini V, Scocco P, Boiti C, Ceccarelli P
Research in veterinary science89(2)147-9(2010 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HCRT gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HCRT cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe30560 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980951.1 , XM_013980950.1 , XM_013980949.1 , NM_214156.2 | |
Accession Version | NM_214156.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577203200000 | |
Organism | Sus scrofa(pig) | |
Product | orexin precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF434655.1. On Mar 25, 2007 this sequence version replaced NM_214156.1. ##Evidence-Data-START## Transcript exon combination :: EF434655.1, AF075241.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1876824, SAMEA2040775 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999321.1 |
CDS | 86..481 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe233230 | |
Clone ID Related Accession (Same CDS sequence) | XM_021066225.1 | |
Accession Version | XM_021066225.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 513bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | orexin isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010454.4) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATCAGA GGCTATTTGC ACCTGTCATC TCATTTCCCC CTCCCAGCAG CCCTGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020921884.1 |
CDS | 27..539 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTATCAGA GGCTATTTGC ACCTGTCATC TCATTTCCCC CTCCCAGCAG CCCTGCACAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe30560 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980951.1 , XM_013980950.1 , XM_013980949.1 , NM_214156.2 | |
Accession Version | XM_013980951.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | orexin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611500.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836405.1 |
CDS | 806..1201 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe30560 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980951.1 , XM_013980950.1 , XM_013980949.1 , NM_214156.2 | |
Accession Version | XM_013980950.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | orexin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611500.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836404.1 |
CDS | 681..1076 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe30560 | |
Clone ID Related Accession (Same CDS sequence) | XM_013980951.1 , XM_013980950.1 , XM_013980949.1 , NM_214156.2 | |
Accession Version | XM_013980949.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 396bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | orexin isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003611500.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013836403.1 |
CDS | 605..1000 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAATCCTC CTTTTGCAAA GGTCTCCTGG GCCACCGTGA CGCTGCTGCT TCTGCTACTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Orexin A modulates endocrine function and viability of porcine pancreatic islets. |
Expression of orexin A and B in the porcine hypothalamus during the oestrous cycle. |
Changes in plasma orexin A and orexin B concentrations during the estrous cycle of the pig. |
Differential gene expression and immune localization of the orexin system in the major salivary glands of pigs. |
Immunohistochemical evidence of Orexin-A in the pancreatic beta cells of domestic animals. |