| Gene Symbol | STX5 |
| Entrez Gene ID | 100628048 |
| Full Name | syntaxin 5 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
IVD Raw Materials
ORF » Species Summary » Sus scrofa » STX5 cDNA ORF clone
| Gene Symbol | STX5 |
| Entrez Gene ID | 100628048 |
| Full Name | syntaxin 5 |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| mRNA | Protein | Name |
|---|---|---|
| XM_013994189.1 | XP_013849643.1 | syntaxin-5 isoform X1 |
| XM_021079995.1 | XP_020935654.1 | syntaxin-5 isoform X3 |
| NM_001243381.1 | NP_001230310.1 | syntaxin-5 |
| XM_021079989.1 | XP_020935648.1 | syntaxin-5 isoform X1 |
| XM_013994189.2 | XP_013849643.1 | syntaxin-5 isoform X2 |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following STX5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the STX5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe28502 | |
| Clone ID Related Accession (Same CDS sequence) | XM_013994189.1 , NM_001243381.1 , XM_013994189.2 | |
| Accession Version | NM_001243381.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1445011200000 | |
| Organism | Sus scrofa(pig) | |
| Product | syntaxin-5 | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB790314.1, CX061944.1 and AK352249.1. On or before Aug 12, 2011 this sequence version replaced XM_003353811.1, XM_003353812.1. Sequence Note: This RefSeq record was created from transcripts from different breeds because no single transcript from the same breed was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## CDS exon combination :: AK352486.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMEA1487420, SAMEA1876824 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001230310.1 |
| CDS | 144..1211 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001243381.1 |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe242529 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021079989.1 | |
| Accession Version | XM_021079989.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1164bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1494518400000 | |
| Organism | Sus scrofa(pig) | |
| Product | syntaxin-5 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGCCACCGC CTTCTCGTCA CCGGGGGTGG GGTTACGTGT GGGTGACGTG GCGGCTTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020935648.1 |
| CDS | 7..1170 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021079989.1 |
1 | ATGCCACCGC CTTCTCGTCA CCGGGGGTGG GGTTACGTGT GGGTGACGTG GCGGCTTCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe242530 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021079995.1 | |
| Accession Version | XM_021079995.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 906bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1494518400000 | |
| Organism | Sus scrofa(pig) | |
| Product | syntaxin-5 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTCCTGCC GGGATCGGAC CCAGGAATTC CTGTCTGCCT GCAAGTCCCT GCAGAGTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020935654.1 |
| CDS | 235..1140 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021079995.1 |
1 | ATGTCCTGCC GGGATCGGAC CCAGGAATTC CTGTCTGCCT GCAAGTCCCT GCAGAGTCGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe28502 | |
| Clone ID Related Accession (Same CDS sequence) | XM_013994189.1 , NM_001243381.1 , XM_013994189.2 | |
| Accession Version | XM_013994189.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1441814400000 | |
| Organism | Sus scrofa(Pig) | |
| Product | syntaxin-5 isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609518.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_013849643.1 |
| CDS | 168..1235 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_013994189.1 |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe28502 | |
| Clone ID Related Accession (Same CDS sequence) | XM_013994189.1 , NM_001243381.1 , XM_013994189.2 | |
| Accession Version | XM_013994189.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1494518400000 | |
| Organism | Sus scrofa(pig) | |
| Product | syntaxin-5 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_013994189.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_013849643.1 |
| CDS | 188..1255 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_013994189.2 |
1 | ATGATCCCGC GGAAACGCTA CGGGTCTAAG AACACGGATC AGGGTGTCTA CCTGGGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |