Gene Symbol | CRAT |
Entrez Gene ID | 100127351 |
Full Name | carnitine O-acetyltransferase |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
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ORF » Species Summary » Sus scrofa » CRAT cDNA ORF clone
Gene Symbol | CRAT |
Entrez Gene ID | 100127351 |
Full Name | carnitine O-acetyltransferase |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005660485.3 | XP_005660542.2 | carnitine O-acetyltransferase isoform X1 |
XM_021077790.1 | XP_020933449.1 | carnitine O-acetyltransferase isoform X1 |
XM_005660485.2 | XP_005660542.1 | carnitine O-acetyltransferase isoform X1 |
NM_001113047.1 | NP_001106518.1 | carnitine O-acetyltransferase |
XM_021078296.1 | XP_020933955.1 | carnitine O-acetyltransferase isoform X2 |
The carnitine acetyltransferase gene (CRAT): a characterization of porcine transcripts with insights into the 5'-end variants of mammalian transcripts and their possible sub-cellular localization.
Robic A, Faraut T, Liaubet L, Milan D
Cellular & molecular biology letters14(1)90-9(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CRAT gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CRAT cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29364 | |
Clone ID Related Accession (Same CDS sequence) | NM_001113047.1 | |
Accession Version | NM_001113047.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1881bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1445011200000 | |
Organism | Sus scrofa(pig) | |
Product | carnitine O-acetyltransferase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AM919499.1. ##Evidence-Data-START## Transcript exon combination :: AM919499.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487398, SAMEA1487410 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGTTATCCT TCGCTGCCAG GACCGTGGTG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001106518.1 |
CDS | 121..2001 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTATCCT TCGCTGCCAG GACCGTGGTG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe03502 | |
Clone ID Related Accession (Same CDS sequence) | XM_005660485.2 | |
Accession Version | XM_005660485.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1881bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1441814400000 | |
Organism | Sus scrofa(Pig) | |
Product | carnitine O-acetyltransferase isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003609490.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005660485.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGTG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005660542.1 |
CDS | 343..2223 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGTG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe229035 | |
Clone ID Related Accession (Same CDS sequence) | XM_005660485.3 , XM_021077790.1 | |
Accession Version | XM_005660485.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1881bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | carnitine O-acetyltransferase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005660485.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGCG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005660542.2 |
CDS | 352..2232 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGCG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe229035 | |
Clone ID Related Accession (Same CDS sequence) | XM_005660485.3 , XM_021077790.1 | |
Accession Version | XM_021077790.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1881bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | carnitine O-acetyltransferase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGCG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020933449.1 |
CDS | 130..2010 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAGGACG GGCAGCAGAA AGAGAAGGCG AGGCCCCTGG GCTTCCTCAA GCCCTCCTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe229036 | |
Clone ID Related Accession (Same CDS sequence) | XM_021078296.1 | |
Accession Version | XM_021078296.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1935bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | carnitine O-acetyltransferase isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010443.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCAGGG CAGTGGCTTT GGGGCTGCCA GGGCCTCCCA GAGCTGGTGA GAGAATGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020933955.1 |
CDS | 772..2706 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCAGGG CAGTGGCTTT GGGGCTGCCA GGGCCTCCCA GAGCTGGTGA GAGAATGAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The carnitine acetyltransferase gene (CRAT): a characterization of porcine transcripts with insights into the 5'-end variants of mammalian transcripts and their possible sub-cellular localization. |