LOC588882 cDNA ORF clone, Strongylocentrotus purpuratus(purple sea urchin)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC588882
Entrez Gene ID	588882
Full Name	MAM and LDL-receptor class A domain-containing protein 1
Gene Type	protein-coding
Organism	Strongylocentrotus purpuratus(purple sea urchin)

mRNA and Protein(s)

mRNA	Protein	Name
XM_788546.4	XP_793639.3	MAM and LDL-receptor class A domain-containing protein 1
XM_788546.5	XP_793639.4	MAM and LDL-receptor class A domain-containing protein 1

Pathways from BioSystems
Gene Ontology

The following LOC588882 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC588882 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSd01567	XM_788546.4 Latest version!	Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00
OSd72392	XM_788546.5 Latest version!	Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$643.30 $919.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC588882 ( XM_788546.4 ) cDNA ORF clone, Strongylocentrotus purpuratus(purple sea urchin) -> XP_793639.3 Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.

Price & Availability↑

CloneID	OSd01567
Clone ID Related Accession (Same CDS sequence)	XM_788546.4
Accession Version	XM_788546.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3528bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1427040000000
Organism	Strongylocentrotus purpuratus(purple sea urchin)
Product	MAM and LDL-receptor class A domain-containing protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011992811.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 24, 2015 this sequence version replaced XM_788546.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGAAGT TGGATGTTCC ATTTCGTCGG CGGCTGCAGC AGCAGGAGAA CAAGATGGCG 
TTCGTTTTAC TTTCGATATT CGCTTGTCTG GCAGCTATGT GTGGTGTTTG TGTAGGAGAA 
CGATGCAACT TTGACTTTAA CCTATGCAAC TACACTCAGG ACACCACGGA TCAGTTGAAT 
TGGGTCAGGA TAAACGGTGC ATCGTCTATG GATGATACTG GACCATCCGC TGACCATACC 
CACGGGACAT CGCAAGGATA CTATGTCTAC ACCAATGCCG GCTTCCCTCA AACTGCTGGC 
CTGGTTTCTC GACTAATCAG CCCACCCATA GCCGTTTCGG CGCCTAGTTG TCTTCAGTTT 
TATTACTACA TGCACGGTGC TCATATGGGC TCTCTCCGAG CGTACACGGG TGTCGACTCG 
TCAAGTCCAG TATGGAGCCG CTCGGGAAAC CAGGGCAGAC AATGGTTCAG GGGTGTGGCT 
ACTCTAGATC CTTCATCTAG TGCTAATGTT CAGATCGTCT TTGAGGCAGT CACTGGCCCC 
GGGATATTAT CTGACATCGC AATCGATGAT GTTGAAGTTC TTGACGGAGC ATGCCCTATA 
GAAAACATGA GATGTGAATT CGAGGATGGC ATATGTGGTT TTACCCAGGA TCAGACGGAT 
AACTTTGATT TCTTGAGGAA ACAAGGACAA ACTCCGACCG TTACCGGAGG ACCTGATGTC 
GATCAAACCT ACGGAAATCA AACAGGGCAC TACATCTACA TCGAAGCGAA GGGCAACGAC 
AACCACGGGT CCGACAAGGC GCGCATCATC TCGCCCAAAA TACGCGGTAT TCAAGCCAAC 
GACCGCGAGG CCTTCTGTGT GGTGTTCTGG TATTACATGT TCGGTGATAC GGTAGGGGAG 
CTTAACGTCT ACCTGCGCAA CGAGAGCTCT CCGAACCTCG GCCGACCGAT CTGGGGGCTG 
GCAGGGGCTC GAGGAGAAAC GTGGAGGGCG GCTGAAGTGG AGCTCAATAC GCCTGAAGAT 
TTCTACGTTG TATTCGAAGC AATGCGTGGC ATAAGCTTGT ATGGTGCTAT TGCCATCGAT 
GACATCGAGA TCACCAGCTA CGGTTGCCCC GGACATCACG TCATCAAAAA TGTAAGCAGT 
GTGTCCTGTG ACTTCGAAGA AATCGAGATA TGCTACTACA CGCTTGATTC AACCGGTAGC 
ATTTCCTGGG ATTGGACGAA CCGTGCATCA CCGGAAAGTA TTACAGGACC ATCTGTAGAT 
CATACGACTG GCAACGAGCT AGGATACTTC ATGTATGTAT CCAGCTCCAC TCTGATAACT 
TCGGCGGACC GAGCTCGCCT CGTGTCGCCC GTCGCGAAGC GCCAGACGAC CTTGTCCTGT 
GTAGAGTTTT GGTACCACTT GTATGGCAGG GACACCGAAA CGCTCAACGT TTACATCAAA 
CCCGAGGGAG AACCGCTGCC GAGCTCGTCC GCGTGGTCGT TGACGGGAAA CCGGGGTAAC 
TTCTGGCATC GAGCGACATT CAATATCCCG GCTTTCACCA ACGATTATAG GCTTGTCTTT 
GAGGCTATCC CTGGTGATGA AGAGAGAGAT GACATTGCAA TCGATGACGT CATGTTCTAT 
GAAGCCACAC CTTGCCCTAC ACGTACCACT ATTCCGCCAG ACCCGGTGAC ACTACCACCA 
GCAGTCAACT CCATCGATTG CGATTTCGAA AGTAACTTCT GCAGGTACGA GCAGGATTCC 
GAGAACGACC AGGCTGATTG GGCTAGGGAA CAGGGAAAGT ACGTGAGAAG CTCTGATAGG 
GGACCCCATG TCGACCATAC TCTCGGGACA GGCGAAGGTT ACTACGCGAT GTTCGACCCA 
TCACTCTTTC AAAGCCTTAA CCGGTATGAC GTTGCCGTAC TAGTCTCTCC ATTCGTACAG 
GCATCCAACC AACCTCGCTG CGTTATGTTT TACGCATTCA TGTACGGGTC CAATGTTGAC 
TATCTAAACC TGTACATTAG GCCGTGGGGG ACGACGCCTT CACTCGATCC GCAATTCTCG 
ATCTACGGAA ACATTGCCAA TGAATGGCGA CTTTACGGGA TGGACCTACC CGGTTCACAT 
GAGAACTTTC ATGTATTATT TGAGGCAAAT ATCGGCCGCT TCAAGTCCTC TGGAAAGATT 
GCTATCGATG ACATCGGAAT GGTCACTGGA AATTGCCCCG AACAAGTTGC ACCAACCCCG 
CTACCATGGG GTGCAGACTG CGACTTCGAG CAGAACGGGA CACTGTGCGG CTACACACAG 
CGGTCTACGG ATGCCTTTGA CTGGACCTGG CACCAGGGAT CTACGGGAAG CACCAATACT 
GGACCACATA GTGATCACAC CCTTGGCACA TCAGAAGGTC ACTACATGTA TATCGAGACC 
TCACTGCCGC AGCGTCCGGG AAACCTCGCA AGCCTCATCT CCCCTGTGCT GAACAGCCAG 
AACACGGATA CGTGTCTTCG CTTCTACTAC CACGCCATGG GAGAAGGTGA CATTGGTACT 
CTCAGGGTCA TATTCAAATT GGAAGGTCTT TCATCCCTCG TTGAGCTCTT CCGGGTCACT 
GGAAATAAAG ACGATCGTTG GATACCAGTT AATATCGATA TTCCGGCTTC ATCGACAGGG 
TTTGCCGATT TCGAGGTTCG CTTTAACGGC TACAAAGGAA ACAGCTTGAA AGGGGACCTC 
GCCATTGACG ATATTAAATT CTTACGTCAG CCGTGTGAGG GGTACCCTAT TGAAGGTCGA 
TGTAGCTTCG AGCAAGGTAT AGAGTACTGC GGCTATACCC TATTTACGAC AATTGACGTC 
ACTTTTCCAA CCTGGCAATG GTACGACAGG TTAGCTCTCG AGGAATCACC TCTGAAGAAT 
ATCACTTCGA CATCGTTCAT GTACTCGACG TCCAATACCA GAAATATCTA CCCGGTCATG 
TACTCTGATA CCTACGAGCT TCGCGCTCGA GATCATTGCT TAACAGCAAG GGTTCTGTTC 
CTTAATGAAT ACAAAATGCA CTTGAGTATC GCTGTCCAAA GTGGTACCAA CGGCCCACGT 
AATACTGTCG GCACTATCAG CGGCAGACTT GACTCCGATT GGGTGAACGA GGCTTGGAAA 
GTACCCTCGG ATTTCATGGA CGGACCGTTT CGGTTGGTGT TTACTGCCAC CATACAAGGT 
GGTTCTACCG GGATCATAGC CATAGATGAT GTGAATTTCA GCCCTCAATC GGGAGACTGC 
GGTCAGGATG ATGGTGGAGG AACTTCGGCA AGGTCGTCCG GTTATAGCGA AAATCCAGGC 
CTCATTGCCG GGATCATCAT CGTTCTCCTT CTTCTCATCG CCGTGACCAT CGTCGCCGTT 
ATGATACGTC TTAAAAGATC GTTTACAGGG AAATTTCCAA TAGTAAGCTT CAGTAACAAG 
CAGCCTGATG AGCAGCCCGT CATCAGTGAC AGCGGGGGTG ATAACGAAAG CGGTATCACG 
GGGACTTCAT TTACGTCAGC AACCAACGTC GACACAAGTC AAGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_793639.3
CDS	565..4092
Translation	MMKLDVPFRRRLQQQENKMAFVLLSIFACLAAMCGVCVGERCNFDFNLCNYTQDTTDQLNWVRINGASSMDDTGPSADHTHGTSQGYYVYTNAGFPQTAGLVSRLISPPIAVSAPSCLQFYYYMHGAHMGSLRAYTGVDSSSPVWSRSGNQGRQWFRGVATLDPSSSANVQIVFEAVTGPGILSDIAIDDVEVLDGACPIENMRCEFEDGICGFTQDQTDNFDFLRKQGQTPTVTGGPDVDQTYGNQTGHYIYIEAKGNDNHGSDKARIISPKIRGIQANDREAFCVVFWYYMFGDTVGELNVYLRNESSPNLGRPIWGLAGARGETWRAAEVELNTPEDFYVVFEAMRGISLYGAIAIDDIEITSYGCPGHHVIKNVSSVSCDFEEIEICYYTLDSTGSISWDWTNRASPESITGPSVDHTTGNELGYFMYVSSSTLITSADRARLVSPVAKRQTTLSCVEFWYHLYGRDTETLNVYIKPEGEPLPSSSAWSLTGNRGNFWHRATFNIPAFTNDYRLVFEAIPGDEERDDIAIDDVMFYEATPCPTRTTIPPDPVTLPPAVNSIDCDFESNFCRYEQDSENDQADWAREQGKYVRSSDRGPHVDHTLGTGEGYYAMFDPSLFQSLNRYDVAVLVSPFVQASNQPRCVMFYAFMYGSNVDYLNLYIRPWGTTPSLDPQFSIYGNIANEWRLYGMDLPGSHENFHVLFEANIGRFKSSGKIAIDDIGMVTGNCPEQVAPTPLPWGADCDFEQNGTLCGYTQRSTDAFDWTWHQGSTGSTNTGPHSDHTLGTSEGHYMYIETSLPQRPGNLASLISPVLNSQNTDTCLRFYYHAMGEGDIGTLRVIFKLEGLSSLVELFRVTGNKDDRWIPVNIDIPASSTGFADFEVRFNGYKGNSLKGDLAIDDIKFLRQPCEGYPIEGRCSFEQGIEYCGYTLFTTIDVTFPTWQWYDRLALEESPLKNITSTSFMYSTSNTRNIYPVMYSDTYELRARDHCLTARVLFLNEYKMHLSIAVQSGTNGPRNTVGTISGRLDSDWVNEAWKVPSDFMDGPFRLVFTATIQGGSTGIIAIDDVNFSPQSGDCGQDDGGGTSARSSGYSENPGLIAGIIIVLLLLIAVTIVAVMIRLKRSFTGKFPIVSFSNKQPDEQPVISDSGGDNESGITGTSFTSATNVDTSQA

Target ORF information:

RefSeq Version	XM_788546.4
Organism	Strongylocentrotus purpuratus(purple sea urchin)
Definition	Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_788546.4

ORF Insert Sequence:

ATGATGAAGT TGGATGTTCC ATTTCGTCGG CGGCTGCAGC AGCAGGAGAA CAAGATGGCG 
TTCGTTTTAC TTTCGATATT CGCTTGTCTG GCAGCTATGT GTGGTGTTTG TGTAGGAGAA 
CGATGCAACT TTGACTTTAA CCTATGCAAC TACACTCAGG ACACCACGGA TCAGTTGAAT 
TGGGTCAGGA TAAACGGTGC ATCGTCTATG GATGATACTG GACCATCCGC TGACCATACC 
CACGGGACAT CGCAAGGATA CTATGTCTAC ACCAATGCCG GCTTCCCTCA AACTGCTGGC 
CTGGTTTCTC GACTAATCAG CCCACCCATA GCCGTTTCGG CGCCTAGTTG TCTTCAGTTT 
TATTACTACA TGCACGGTGC TCATATGGGC TCTCTCCGAG CGTACACGGG TGTCGACTCG 
TCAAGTCCAG TATGGAGCCG CTCGGGAAAC CAGGGCAGAC AATGGTTCAG GGGTGTGGCT 
ACTCTAGATC CTTCATCTAG TGCTAATGTT CAGATCGTCT TTGAGGCAGT CACTGGCCCC 
GGGATATTAT CTGACATCGC AATCGATGAT GTTGAAGTTC TTGACGGAGC ATGCCCTATA 
GAAAACATGA GATGTGAATT CGAGGATGGC ATATGTGGTT TTACCCAGGA TCAGACGGAT 
AACTTTGATT TCTTGAGGAA ACAAGGACAA ACTCCGACCG TTACCGGAGG ACCTGATGTC 
GATCAAACCT ACGGAAATCA AACAGGGCAC TACATCTACA TCGAAGCGAA GGGCAACGAC 
AACCACGGGT CCGACAAGGC GCGCATCATC TCGCCCAAAA TACGCGGTAT TCAAGCCAAC 
GACCGCGAGG CCTTCTGTGT GGTGTTCTGG TATTACATGT TCGGTGATAC GGTAGGGGAG 
CTTAACGTCT ACCTGCGCAA CGAGAGCTCT CCGAACCTCG GCCGACCGAT CTGGGGGCTG 
GCAGGGGCTC GAGGAGAAAC GTGGAGGGCG GCTGAAGTGG AGCTCAATAC GCCTGAAGAT 
TTCTACGTTG TATTCGAAGC AATGCGTGGC ATAAGCTTGT ATGGTGCTAT TGCCATCGAT 
GACATCGAGA TCACCAGCTA CGGTTGCCCC GGACATCACG TCATCAAAAA TGTAAGCAGT 
GTGTCCTGTG ACTTCGAAGA AATCGAGATA TGCTACTACA CGCTTGATTC AACCGGTAGC 
ATTTCCTGGG ATTGGACGAA CCGTGCATCA CCGGAAAGTA TTACAGGACC ATCTGTAGAT 
CATACGACTG GCAACGAGCT AGGATACTTC ATGTATGTAT CCAGCTCCAC TCTGATAACT 
TCGGCGGACC GAGCTCGCCT CGTGTCGCCC GTCGCGAAGC GCCAGACGAC CTTGTCCTGT 
GTAGAGTTTT GGTACCACTT GTATGGCAGG GACACCGAAA CGCTCAACGT TTACATCAAA 
CCCGAGGGAG AACCGCTGCC GAGCTCGTCC GCGTGGTCGT TGACGGGAAA CCGGGGTAAC 
TTCTGGCATC GAGCGACATT CAATATCCCG GCTTTCACCA ACGATTATAG GCTTGTCTTT 
GAGGCTATCC CTGGTGATGA AGAGAGAGAT GACATTGCAA TCGATGACGT CATGTTCTAT 
GAAGCCACAC CTTGCCCTAC ACGTACCACT ATTCCGCCAG ACCCGGTGAC ACTACCACCA 
GCAGTCAACT CCATCGATTG CGATTTCGAA AGTAACTTCT GCAGGTACGA GCAGGATTCC 
GAGAACGACC AGGCTGATTG GGCTAGGGAA CAGGGAAAGT ACGTGAGAAG CTCTGATAGG 
GGACCCCATG TCGACCATAC TCTCGGGACA GGCGAAGGTT ACTACGCGAT GTTCGACCCA 
TCACTCTTTC AAAGCCTTAA CCGGTATGAC GTTGCCGTAC TAGTCTCTCC ATTCGTACAG 
GCATCCAACC AACCTCGCTG CGTTATGTTT TACGCATTCA TGTACGGGTC CAATGTTGAC 
TATCTAAACC TGTACATTAG GCCGTGGGGG ACGACGCCTT CACTCGATCC GCAATTCTCG 
ATCTACGGAA ACATTGCCAA TGAATGGCGA CTTTACGGGA TGGACCTACC CGGTTCACAT 
GAGAACTTTC ATGTATTATT TGAGGCAAAT ATCGGCCGCT TCAAGTCCTC TGGAAAGATT 
GCTATCGATG ACATCGGAAT GGTCACTGGA AATTGCCCCG AACAAGTTGC ACCAACCCCG 
CTACCATGGG GTGCAGACTG CGACTTCGAG CAGAACGGGA CACTGTGCGG CTACACACAG 
CGGTCTACGG ATGCCTTTGA CTGGACCTGG CACCAGGGAT CTACGGGAAG CACCAATACT 
GGACCACATA GTGATCACAC CCTTGGCACA TCAGAAGGTC ACTACATGTA TATCGAGACC 
TCACTGCCGC AGCGTCCGGG AAACCTCGCA AGCCTCATCT CCCCTGTGCT GAACAGCCAG 
AACACGGATA CGTGTCTTCG CTTCTACTAC CACGCCATGG GAGAAGGTGA CATTGGTACT 
CTCAGGGTCA TATTCAAATT GGAAGGTCTT TCATCCCTCG TTGAGCTCTT CCGGGTCACT 
GGAAATAAAG ACGATCGTTG GATACCAGTT AATATCGATA TTCCGGCTTC ATCGACAGGG 
TTTGCCGATT TCGAGGTTCG CTTTAACGGC TACAAAGGAA ACAGCTTGAA AGGGGACCTC 
GCCATTGACG ATATTAAATT CTTACGTCAG CCGTGTGAGG GGTACCCTAT TGAAGGTCGA 
TGTAGCTTCG AGCAAGGTAT AGAGTACTGC GGCTATACCC TATTTACGAC AATTGACGTC 
ACTTTTCCAA CCTGGCAATG GTACGACAGG TTAGCTCTCG AGGAATCACC TCTGAAGAAT 
ATCACTTCGA CATCGTTCAT GTACTCGACG TCCAATACCA GAAATATCTA CCCGGTCATG 
TACTCTGATA CCTACGAGCT TCGCGCTCGA GATCATTGCT TAACAGCAAG GGTTCTGTTC 
CTTAATGAAT ACAAAATGCA CTTGAGTATC GCTGTCCAAA GTGGTACCAA CGGCCCACGT 
AATACTGTCG GCACTATCAG CGGCAGACTT GACTCCGATT GGGTGAACGA GGCTTGGAAA 
GTACCCTCGG ATTTCATGGA CGGACCGTTT CGGTTGGTGT TTACTGCCAC CATACAAGGT 
GGTTCTACCG GGATCATAGC CATAGATGAT GTGAATTTCA GCCCTCAATC GGGAGACTGC 
GGTCAGGATG ATGGTGGAGG AACTTCGGCA AGGTCGTCCG GTTATAGCGA AAATCCAGGC 
CTCATTGCCG GGATCATCAT CGTTCTCCTT CTTCTCATCG CCGTGACCAT CGTCGCCGTT 
ATGATACGTC TTAAAAGATC GTTTACAGGG AAATTTCCAA TAGTAAGCTT CAGTAACAAG 
CAGCCTGATG AGCAGCCCGT CATCAGTGAC AGCGGGGGTG ATAACGAAAG CGGTATCACG 
GGGACTTCAT TTACGTCAGC AACCAACGTC GACACAAGTC AAGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC588882 ( XM_788546.5 ) cDNA ORF clone, Strongylocentrotus purpuratus(purple sea urchin) -> XP_793639.4 Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.

Price & Availability↑

CloneID	OSd72392
Clone ID Related Accession (Same CDS sequence)	XM_788546.5
Accession Version	XM_788546.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3528bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1569427200000
Organism	Strongylocentrotus purpuratus(purple sea urchin)
Product	MAM and LDL-receptor class A domain-containing protein 1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145615.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_788546.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGATGAAGT TGGATGTTCC ATTTCGTCGC CGGCTGCAGC AGCACGAGAA CAAGATGGCG 
TTCGTTTTAC TTTCGATATT CGCTTGTCTG GCAGCTATGT GTGGTGTTTG TGTCGGAGAA 
CGATGCAACT TTGACTTTAA CCTATGCAAC TACACTCAGG ACACCACGGA TCAGTTGGAT 
TGGGTCAGGA TAAACGGTGC ATCGTCTGTG GATGATACTG GACCATCCGC CGACCATACA 
CATGGGACAT CACAAGGATA CTATGTCTAC ACCAATGCCG GCTTCCCTCA AATTGCTGGA 
CTGGTTTCTC GACTAATCAG CCCACCCATA GCTGTTTCAG GGCCCAGTTG TCTTCAGTTT 
TATTACTACA TGCACGGTGC TCATATGGGC TCTCTTCGAG CGTACACGGG TGTCGACTCG 
TCAAGTCCAG TATGGAGCCG CTCGGGAAAC CAGGGCAGAC AATGGTTCAG GGGTGTGGCT 
ACTCTAGATC CTTCATCTAG TGCTAATATT CAGATCGTCT TTGAGGCAGT CACTGGCCCC 
GGGATATTAT CTGACATCGC AATCGATGAT GTTGAAGTTC TTGACGGAGC ATGCCCTATA 
GAAAACATGA GATGTGAATT CGAGGATGGC ATATGTGGTT TTACCCAGGA TCAGACGGAT 
AACTTTGATT TCTTGAGGAA ACAAGGACAA ACTCCGACCG TTACCGGAGG ACCTGATGTC 
GATCAAACCT ACGGAAATCA AACAGGGCAC TACATCTACA TCGAAGCGAA GGGCAACGAC 
AACCACGGGT CCGACAAGGC GCGCATCATC TCGCCCAAAA TACGCGGTAT TCAAGCCAAC 
GACCGCGAGG CCTTCTGTGT GGTGTTCTGG TATTACATGT TCGGTGATAC GGTAGGGGAG 
CTTAACGTCT ACCTGCGCAA CGAGAGCTCT CCGAACCTCG GCCGACCGAT CTGGGGGCTG 
GCAGGGGCTC GAGGAGAAAC GTGGAGGGCG GCTGAAGTGG AGCTCAATAC GCCTGAAGAT 
TTCTACGTTG TATTCGAAGC AATGCGTGGC ATAAGCTTGT ATGGTGCTAT TGCCATCGAT 
GACATCGAGA TCACCAGCTA CGGTTGCCCC GGACATCACG TCATCAAAAA TGTAAGCAGT 
GTGTCCTGTG ACTTCGAAGA AATCGAGATA TGCTACTACA CGCTTGATTC AACCGGTAGC 
ATTTCCTGGG ATTGGACGAA CCGTGCATCA CCGGAAAGTA TTACAGGACC ATCTGTAGAT 
CATACGACTG GCAACGAGCT AGGATACTTC ATGTATGTAT CCAGCTCCAC TCTGATAACT 
TCGGCGGACC GAGCTCGCCT CGTGTCGCCC GTCGCGAAGC GCCAGACGAC CTTGTCCTGT 
GTAGAGTTTT GGTACCACTT GTATGGCAGG GACACCGAAA CGCTCAACGT TTACATCAAA 
CCCGAGGGAG AACCGCTGCC GAGCTCGTCC GCGTGGTCGT TGACGGGAAA CCGGGGTAAC 
TTCTGGCATC GAGCGACATT CAATATCCCG GCTTTCACCA ACGATTATAG GCTTGTCTTT 
GAGGCTATCC CTGGTGATGA AGCGAGAGAT GACATTGCAA TCGATGACGT CATGTTCTAT 
GAAGCCACAC CTTGCCCTAC ACGTACCACC ATTCCGCCAG ACCCGGTGAC ACCACCACCA 
GCAGTCAACT CCATCGATTG CGATTTCGAA AGTAACTTTT GCGGGTACCA GCAAGATTCC 
GAGAACGACC AGGCTGATTG GGCTAGGGAA CAGGGAAAGT ACGTGAGAAG CTCTGATAGG 
GGACCCCATG TAGACCACAC TCTCGGGACA GGCGAAGGTT ACTACGCGAT GTTCGACCCA 
TCACTCTTTC AAAGCCTTAA CCGGTATGAC GTTGCCGTAC TAGTCTCTCC ATTCGTACAG 
GCATCCAACC AACCTCGCTG CGTTCTGTTT TACGCATTCA TGTACGGGTC CAATGTGGAC 
TATCTAAACC TGTACATTAG ACCGTGGGGC ACGACGCCTT CACTCGATCC GCAATTCTCG 
ATCTACGGAA ACATTGCCAA TGAATGGCGA CTTTACGGGA TGGACCTACC CGGTTCAAAA 
GAGAACTTTC ATGTATTATT TGAGGCAAAT ATCGGCCGCT TCAAGTCCTC TGGAAAGATT 
GCTATCGATG ACATCGGAAT GGTCACTGGA AATTGCCCCG AACAAGTTGC ACCAACCCCG 
CTACCATGGG GTGCAGACTG CGACTTCGAG CAGAACGGGA CACTGTGCGG CTACACACAG 
CGGTCTACGG ATGCCTTTGA CTGGACCTGG CACCAGGGAT CTACGGGAAG CACCAATACT 
GGACCACATA GTGATCACAC CCTTGGCACA TCAGAAGGTC ACTACATGTA TATCGAGACC 
TCACTGCCGC AGCGTCCGGG AAACCTCGCT AGCCTCATCT CCCCTCTGCT GAACAGCCAG 
AACACGGACA CGTGTCTTCG CTTCTACTAC CACGCCATGG GAGAAGGTGA CATTGGTACT 
CTCAGGATCA TATTCAAATT GGAAGGTCTT TCATCCCTCG TTGAGCTCTT CCGGGTCACT 
GGAAATAAAG ACGATCGTTG GATACCAGTT AATATCGATA TTCCGGCTTC ATCGACAGGG 
TTTGCCGATT TCGAGGTTCG CTTTAACGGC TACAAAGGAA ACAGCTTGAA AGGGGACCTC 
GCCATTGACG ATATTAAATT CTTACGTCAG CCGTGTGATG GGTACCCTAC TGAAGGTCGA 
TGTAGCTTCG AGCAAGGTAT AGAGTACTGC GGCTATACCC TATTTACGAC AATTGACGTC 
ACTTTTCCAA CCTGGCAATG GTACGACAGG TTAGCTCTCG AGGAATCACC CCTGAAGAAT 
ATCACTTCGA CATCGTTCAT GTACTCGACG TCCAATACCA GAAATATCTA CCCGGTCATG 
TACTCTGATA CCTACGAGCT TCGCGCTCGA GATCATTGCT TAACAGCAAG GGTTCTGTTC 
CTTAATGAAT ACAAAATGCA CTTGAGTATC GCTGTCCAAA GTGGTACCAA CGGCCCACGT 
AATACTATCG GCACTATCAG CGGCAGACTT GACTCCGAGT GGGTGAACGA GGCGTGGAAA 
GTACCCTCGG ATTTCATGGA CGGACCGTTT CGGTTGGTGT TTACTGCCAC CATACAAGGT 
GGTTCTACCG GGATCATAGC CATAGATGAT GTGAATTTCA GCCCTCAATC GGGAGACTGC 
GGTCAGGATG ATGGTGGAGG AACTTCGGCA AGGTCGTCCG GTTATAGCGA AAATCCAGGC 
CTCATTGCCG GGATCATCAT CGTTCTCCTT CTTCTCATCG CCGTGACCAT CGTCGCCGTT 
ATGATACGTC TTAAAAGATC GTTTACAGGG AAATTTCCAA TAGTAAGCTT CAGTAACAAG 
CAGCCTGATG AGCAGCCCGT CATCAGTGAC AGCGGGGGTG ATAACGAAAG CGGTATCACG 
GGGACTTCAT TTACGTCAGC AACCAACGTC GACACAAGTC AAGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_793639.4
CDS	564..4091
Translation	MMKLDVPFRRRLQQHENKMAFVLLSIFACLAAMCGVCVGERCNFDFNLCNYTQDTTDQLDWVRINGASSVDDTGPSADHTHGTSQGYYVYTNAGFPQIAGLVSRLISPPIAVSGPSCLQFYYYMHGAHMGSLRAYTGVDSSSPVWSRSGNQGRQWFRGVATLDPSSSANIQIVFEAVTGPGILSDIAIDDVEVLDGACPIENMRCEFEDGICGFTQDQTDNFDFLRKQGQTPTVTGGPDVDQTYGNQTGHYIYIEAKGNDNHGSDKARIISPKIRGIQANDREAFCVVFWYYMFGDTVGELNVYLRNESSPNLGRPIWGLAGARGETWRAAEVELNTPEDFYVVFEAMRGISLYGAIAIDDIEITSYGCPGHHVIKNVSSVSCDFEEIEICYYTLDSTGSISWDWTNRASPESITGPSVDHTTGNELGYFMYVSSSTLITSADRARLVSPVAKRQTTLSCVEFWYHLYGRDTETLNVYIKPEGEPLPSSSAWSLTGNRGNFWHRATFNIPAFTNDYRLVFEAIPGDEARDDIAIDDVMFYEATPCPTRTTIPPDPVTPPPAVNSIDCDFESNFCGYQQDSENDQADWAREQGKYVRSSDRGPHVDHTLGTGEGYYAMFDPSLFQSLNRYDVAVLVSPFVQASNQPRCVLFYAFMYGSNVDYLNLYIRPWGTTPSLDPQFSIYGNIANEWRLYGMDLPGSKENFHVLFEANIGRFKSSGKIAIDDIGMVTGNCPEQVAPTPLPWGADCDFEQNGTLCGYTQRSTDAFDWTWHQGSTGSTNTGPHSDHTLGTSEGHYMYIETSLPQRPGNLASLISPLLNSQNTDTCLRFYYHAMGEGDIGTLRIIFKLEGLSSLVELFRVTGNKDDRWIPVNIDIPASSTGFADFEVRFNGYKGNSLKGDLAIDDIKFLRQPCDGYPTEGRCSFEQGIEYCGYTLFTTIDVTFPTWQWYDRLALEESPLKNITSTSFMYSTSNTRNIYPVMYSDTYELRARDHCLTARVLFLNEYKMHLSIAVQSGTNGPRNTIGTISGRLDSEWVNEAWKVPSDFMDGPFRLVFTATIQGGSTGIIAIDDVNFSPQSGDCGQDDGGGTSARSSGYSENPGLIAGIIIVLLLLIAVTIVAVMIRLKRSFTGKFPIVSFSNKQPDEQPVISDSGGDNESGITGTSFTSATNVDTSQA

Target ORF information:

RefSeq Version	XM_788546.5
Organism	Strongylocentrotus purpuratus(purple sea urchin)
Definition	Strongylocentrotus purpuratus MAM and LDL-receptor class A domain-containing protein 1 (LOC588882), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_788546.5

ORF Insert Sequence:

ATGATGAAGT TGGATGTTCC ATTTCGTCGC CGGCTGCAGC AGCACGAGAA CAAGATGGCG 
TTCGTTTTAC TTTCGATATT CGCTTGTCTG GCAGCTATGT GTGGTGTTTG TGTCGGAGAA 
CGATGCAACT TTGACTTTAA CCTATGCAAC TACACTCAGG ACACCACGGA TCAGTTGGAT 
TGGGTCAGGA TAAACGGTGC ATCGTCTGTG GATGATACTG GACCATCCGC CGACCATACA 
CATGGGACAT CACAAGGATA CTATGTCTAC ACCAATGCCG GCTTCCCTCA AATTGCTGGA 
CTGGTTTCTC GACTAATCAG CCCACCCATA GCTGTTTCAG GGCCCAGTTG TCTTCAGTTT 
TATTACTACA TGCACGGTGC TCATATGGGC TCTCTTCGAG CGTACACGGG TGTCGACTCG 
TCAAGTCCAG TATGGAGCCG CTCGGGAAAC CAGGGCAGAC AATGGTTCAG GGGTGTGGCT 
ACTCTAGATC CTTCATCTAG TGCTAATATT CAGATCGTCT TTGAGGCAGT CACTGGCCCC 
GGGATATTAT CTGACATCGC AATCGATGAT GTTGAAGTTC TTGACGGAGC ATGCCCTATA 
GAAAACATGA GATGTGAATT CGAGGATGGC ATATGTGGTT TTACCCAGGA TCAGACGGAT 
AACTTTGATT TCTTGAGGAA ACAAGGACAA ACTCCGACCG TTACCGGAGG ACCTGATGTC 
GATCAAACCT ACGGAAATCA AACAGGGCAC TACATCTACA TCGAAGCGAA GGGCAACGAC 
AACCACGGGT CCGACAAGGC GCGCATCATC TCGCCCAAAA TACGCGGTAT TCAAGCCAAC 
GACCGCGAGG CCTTCTGTGT GGTGTTCTGG TATTACATGT TCGGTGATAC GGTAGGGGAG 
CTTAACGTCT ACCTGCGCAA CGAGAGCTCT CCGAACCTCG GCCGACCGAT CTGGGGGCTG 
GCAGGGGCTC GAGGAGAAAC GTGGAGGGCG GCTGAAGTGG AGCTCAATAC GCCTGAAGAT 
TTCTACGTTG TATTCGAAGC AATGCGTGGC ATAAGCTTGT ATGGTGCTAT TGCCATCGAT 
GACATCGAGA TCACCAGCTA CGGTTGCCCC GGACATCACG TCATCAAAAA TGTAAGCAGT 
GTGTCCTGTG ACTTCGAAGA AATCGAGATA TGCTACTACA CGCTTGATTC AACCGGTAGC 
ATTTCCTGGG ATTGGACGAA CCGTGCATCA CCGGAAAGTA TTACAGGACC ATCTGTAGAT 
CATACGACTG GCAACGAGCT AGGATACTTC ATGTATGTAT CCAGCTCCAC TCTGATAACT 
TCGGCGGACC GAGCTCGCCT CGTGTCGCCC GTCGCGAAGC GCCAGACGAC CTTGTCCTGT 
GTAGAGTTTT GGTACCACTT GTATGGCAGG GACACCGAAA CGCTCAACGT TTACATCAAA 
CCCGAGGGAG AACCGCTGCC GAGCTCGTCC GCGTGGTCGT TGACGGGAAA CCGGGGTAAC 
TTCTGGCATC GAGCGACATT CAATATCCCG GCTTTCACCA ACGATTATAG GCTTGTCTTT 
GAGGCTATCC CTGGTGATGA AGCGAGAGAT GACATTGCAA TCGATGACGT CATGTTCTAT 
GAAGCCACAC CTTGCCCTAC ACGTACCACC ATTCCGCCAG ACCCGGTGAC ACCACCACCA 
GCAGTCAACT CCATCGATTG CGATTTCGAA AGTAACTTTT GCGGGTACCA GCAAGATTCC 
GAGAACGACC AGGCTGATTG GGCTAGGGAA CAGGGAAAGT ACGTGAGAAG CTCTGATAGG 
GGACCCCATG TAGACCACAC TCTCGGGACA GGCGAAGGTT ACTACGCGAT GTTCGACCCA 
TCACTCTTTC AAAGCCTTAA CCGGTATGAC GTTGCCGTAC TAGTCTCTCC ATTCGTACAG 
GCATCCAACC AACCTCGCTG CGTTCTGTTT TACGCATTCA TGTACGGGTC CAATGTGGAC 
TATCTAAACC TGTACATTAG ACCGTGGGGC ACGACGCCTT CACTCGATCC GCAATTCTCG 
ATCTACGGAA ACATTGCCAA TGAATGGCGA CTTTACGGGA TGGACCTACC CGGTTCAAAA 
GAGAACTTTC ATGTATTATT TGAGGCAAAT ATCGGCCGCT TCAAGTCCTC TGGAAAGATT 
GCTATCGATG ACATCGGAAT GGTCACTGGA AATTGCCCCG AACAAGTTGC ACCAACCCCG 
CTACCATGGG GTGCAGACTG CGACTTCGAG CAGAACGGGA CACTGTGCGG CTACACACAG 
CGGTCTACGG ATGCCTTTGA CTGGACCTGG CACCAGGGAT CTACGGGAAG CACCAATACT 
GGACCACATA GTGATCACAC CCTTGGCACA TCAGAAGGTC ACTACATGTA TATCGAGACC 
TCACTGCCGC AGCGTCCGGG AAACCTCGCT AGCCTCATCT CCCCTCTGCT GAACAGCCAG 
AACACGGACA CGTGTCTTCG CTTCTACTAC CACGCCATGG GAGAAGGTGA CATTGGTACT 
CTCAGGATCA TATTCAAATT GGAAGGTCTT TCATCCCTCG TTGAGCTCTT CCGGGTCACT 
GGAAATAAAG ACGATCGTTG GATACCAGTT AATATCGATA TTCCGGCTTC ATCGACAGGG 
TTTGCCGATT TCGAGGTTCG CTTTAACGGC TACAAAGGAA ACAGCTTGAA AGGGGACCTC 
GCCATTGACG ATATTAAATT CTTACGTCAG CCGTGTGATG GGTACCCTAC TGAAGGTCGA 
TGTAGCTTCG AGCAAGGTAT AGAGTACTGC GGCTATACCC TATTTACGAC AATTGACGTC 
ACTTTTCCAA CCTGGCAATG GTACGACAGG TTAGCTCTCG AGGAATCACC CCTGAAGAAT 
ATCACTTCGA CATCGTTCAT GTACTCGACG TCCAATACCA GAAATATCTA CCCGGTCATG 
TACTCTGATA CCTACGAGCT TCGCGCTCGA GATCATTGCT TAACAGCAAG GGTTCTGTTC 
CTTAATGAAT ACAAAATGCA CTTGAGTATC GCTGTCCAAA GTGGTACCAA CGGCCCACGT 
AATACTATCG GCACTATCAG CGGCAGACTT GACTCCGAGT GGGTGAACGA GGCGTGGAAA 
GTACCCTCGG ATTTCATGGA CGGACCGTTT CGGTTGGTGT TTACTGCCAC CATACAAGGT 
GGTTCTACCG GGATCATAGC CATAGATGAT GTGAATTTCA GCCCTCAATC GGGAGACTGC 
GGTCAGGATG ATGGTGGAGG AACTTCGGCA AGGTCGTCCG GTTATAGCGA AAATCCAGGC 
CTCATTGCCG GGATCATCAT CGTTCTCCTT CTTCTCATCG CCGTGACCAT CGTCGCCGTT 
ATGATACGTC TTAAAAGATC GTTTACAGGG AAATTTCCAA TAGTAAGCTT CAGTAACAAG 
CAGCCTGATG AGCAGCCCGT CATCAGTGAC AGCGGGGGTG ATAACGAAAG CGGTATCACG 
GGGACTTCAT TTACGTCAGC AACCAACGTC GACACAAGTC AAGCTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

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LOC588882 cDNA ORF clone, Strongylocentrotus purpuratus(purple sea urchin)

Gene

Clones

gRNAs

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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