Gene Symbol | LOC585398 |
Entrez Gene ID | 585398 |
Full Name | ras homolog gene family, member C-like |
Gene Type | protein-coding |
Organism | Strongylocentrotus purpuratus(purple sea urchin) |
ORF » Species Summary » Strongylocentrotus purpuratus » LOC585398 cDNA ORF clone
Gene Symbol | LOC585398 |
Entrez Gene ID | 585398 |
Full Name | ras homolog gene family, member C-like |
Gene Type | protein-coding |
Organism | Strongylocentrotus purpuratus(purple sea urchin) |
mRNA | Protein | Name |
---|---|---|
XM_011680504.1 | XP_011678806.1 | ras homolog gene family, member C-like isoform X1 |
XM_011680505.1 | XP_011678807.1 | ras homolog gene family, member C-like isoform X1 |
XM_011680505.2 | XP_011678807.1 | ras homolog gene family, member C-like isoform X1 |
NM_001242679.1 | NP_001229608.1 | ras homolog gene family, member C-like |
XM_011680504.2 | XP_011678806.1 | ras homolog gene family, member C-like isoform X1 |
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.
Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH
Genome research22(10)2079-87(2012 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC585398 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC585398 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSd20246 | |
Clone ID Related Accession (Same CDS sequence) | XM_011680504.1 , XM_011680505.1 , XM_011680505.2 , NM_001242679.1 , XM_011680504.2 | |
Accession Version | NM_001242679.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1455724800000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | ras homolog gene family, member C-like | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAGJ05104525.1. On or before Jun 22, 2011 this sequence version replaced XM_001178050.1, XM_001178170.1, XM_785229.2, XM_001176387.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: CD335803.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096960, SAMN01103178 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229608.1 |
CDS | 1..579 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20246 | |
Clone ID Related Accession (Same CDS sequence) | XM_011680504.1 , XM_011680505.1 , XM_011680505.2 , NM_001242679.1 , XM_011680504.2 | |
Accession Version | XM_011680504.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1427040000000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | ras homolog gene family, member C-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011993144.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011678806.1 |
CDS | 117..695 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20246 | |
Clone ID Related Accession (Same CDS sequence) | XM_011680504.1 , XM_011680505.1 , XM_011680505.2 , NM_001242679.1 , XM_011680504.2 | |
Accession Version | XM_011680505.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1427040000000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | ras homolog gene family, member C-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011993144.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011678807.1 |
CDS | 99..677 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20246 | |
Clone ID Related Accession (Same CDS sequence) | XM_011680504.1 , XM_011680505.1 , XM_011680505.2 , NM_001242679.1 , XM_011680504.2 | |
Accession Version | XM_011680505.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1569427200000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | ras homolog gene family, member C-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145544.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011680505.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011678807.1 |
CDS | 115..693 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSd20246 | |
Clone ID Related Accession (Same CDS sequence) | XM_011680504.1 , XM_011680505.1 , XM_011680505.2 , NM_001242679.1 , XM_011680504.2 | |
Accession Version | XM_011680504.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 579bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1569427200000 | |
Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
Product | ras homolog gene family, member C-like isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145544.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011680504.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_011678806.1 |
CDS | 142..720 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTGCTA TAAGGAAAAA GTTGGTTATC GTTGGAGATG GTGCTTGTGG AAAGACGTGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. |