Ufd1l cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ufd1l
Entrez Gene ID	84478
Full Name	ubiquitin recognition factor in ER associated degradation 1
General protein information	Preferred Names ubiquitin recognition factor in ER associated degradation 1 Names ubiquitin recognition factor in ER-associated degradation protein 1 ubiquitin fusion degradation protein 1 homolog UB fusion protein 1 ubiquitin fusion degradation 1 like
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 11 Map Location: 11q23

mRNA and Protein(s)

mRNA	Protein	Name
NM_053418.2	NP_445870.1	ubiquitin recognition factor in ER-associated degradation protein 1
XM_008768904.2	XP_008767126.1	ubiquitin fusion degradation protein 1 homolog isoform X1

Pathways from BioSystems

Homologies

Kluyveromyces lactis	KLLA0C02475g	XP_452307.1
Neurospora crassa	NCU06856	XP_963330.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001307	XP_321840.2
Caenorhabditis elegans (roundworm)	ufd-1	NP_502348.1
Drosophila melanogaster (fruit fly)	Ufd1-like	NP_524023.1
Schizosaccharomyces pombe (fission yeast)	ufd1	NP_596780.1
Magnaporthe oryzae (rice blast fungus)	MGG_03175	XP_003716815.1
Homo sapiens (human)	UFD1L	NP_005650.2
Macaca mulatta (Rhesus monkey)	UFD1L	XP_001104799.1
Danio rerio (zebrafish)	ufd1l	NP_001002451.1
Arabidopsis thaliana (thale cress)	AT4G38930	NP_974709.1
Arabidopsis thaliana (thale cress)	UFD1	NP_565504.1
Oryza sativa (rice)	Os04g0577000	NP_001053629.1
Canis lupus familiaris (dog)	UFD1L	XP_850373.3
Oryza sativa (rice)	Os02g0181800	NP_001046095.1
Mus musculus (house mouse)	Ufd1l	NP_035802.3
Rattus norvegicus (Norway rat)	Ufd1l	NP_445870.1
Saccharomyces cerevisiae (baker's yeast)	UFD1	NP_011562.1
Eremothecium gossypii	AGOS_AFR662C	NP_986210.1
Gallus gallus (chicken)	UFD1L	NP_989632.1
Xenopus tropicalis (tropical clawed frog)	ufd1l	NP_001006806.1

Gene Ontology
Bibliography

Related articles in PubMed

A non-canonical role of the p97 complex in RIG-I antiviral signaling.
Hao Q, Jiao S, Shi Z, Li C, Meng X, Zhang Z, Wang Y, Song X, Wang W, Zhang R, Zhao Y, Wong CC, Zhou Z
The EMBO journal34(23)2903-20(2015 Dec)

Identification of ERAD components essential for dislocation of the null Hong Kong variant of α-1-antitrypsin (NHK).
Zhong Y, Shen H, Wang Y, Yang Y, Yang P, Fang S
Biochemical and biophysical research communications458(2)424-8(2015 Mar)

Caveolin-1 interacts with Derlin-1 and promotes ubiquitination and degradation of cyclooxygenase-2 via collaboration with p97 complex.
Chen SF, Wu CH, Lee YM, Tam K, Tsai YC, Liou JY, Shyue SK
The Journal of biological chemistry288(46)33462-9(2013 Nov)

Proteomic characterization of the human sperm nucleus.
de Mateo S, Castillo J, Estanyol JM, Ballescà JL, Oliva R
Proteomics11(13)2714-26(2011 Jul)

Mitochondrial localization and function of a subset of 22q11 deletion syndrome candidate genes.
Maynard TM, Meechan DW, Dudevoir ML, Gopalakrishna D, Peters AZ, Heindel CC, Sugimoto TJ, Wu Y, Lieberman JA, Lamantia AS
Molecular and cellular neurosciences39(3)439-51(2008 Nov)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ufd1l gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ufd1l cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa09498	NM_053418.2 Latest version!	Rattus norvegicus ubiquitin recognition factor in ER associated degradation 1 (Ufd1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00
ORa34469	XM_008768904.2 Latest version!	Rattus norvegicus ubiquitin fusion degradation 1 like (yeast) (Ufd1l), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ufd1l ( NM_053418.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_445870.1 Rattus norvegicus ubiquitin recognition factor in ER associated degradation 1 (Ufd1), mRNA.

Price & Availability↑

CloneID	ORa09498
Clone ID Related Accession (Same CDS sequence)	NM_053418.2
Accession Version	NM_053418.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 924bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1571414400000
Organism	Rattus norvegicus(Norway rat)
Product	ubiquitin recognition factor in ER-associated degradation protein 1
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CK599711.1, AF234601.1 and BC061998.1. On Oct 18, 2005 this sequence version replaced NM_053418.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC161818.1, CF110642.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END##

ATGTTTTCTT TCAACATGTT TGACCACCCG ATTCCCCGGG TCTTCCAGAA CCGCTTCTCC 
ACGCAGTACC GCTGCTTCTC TGTATCCATG CTAGCAGGGC CTAATGACAG GTCAGATGTG 
GAGAAAGGAG GGAAGATAAT TATGCCACCC TCAGCCCTCG ATCAACTCAG CCGGCTCAAC 
ATTACCTATC CTATGCTGTT TAAATTGACC AATAAGAATT CAGACCGAAT GACACACTGT 
GGTGTACTGG AGTTTGTTGC TGATGAAGGC ATCTGTTACC TCCCCCACTG GATGATGCAG 
AATTTGCTGT TGGAAGAAGG GGGCCTGGTT CAGGTGGAAA GTGTCAACCT TCAGGTGGCT 
ACTTACTCTA AGTTCCAGCC TCAGAGCCCA GACTTCCTGG ATATCACCAA CCCCAAAGCA 
GTATTAGAAA ATGCACTGAG GAACTTCGCC TGTCTGACGA CTGGAGATGT GATCGCTATC 
AACTACAATG AGAAGATCTA TGAACTGCGG GTGATGGAGA CCAAACCGGA CAAGGCCGTA 
TCCATTATTG AATGTGACAT GAATGTGGAT TTTGATGCTC CCTTGGGCTA CAAAGAACCA 
GAAAGACCAG TACAGCATGA GGAGTCAATA GAGGGAGAAG CTGACCACAG TGGCTATGCT 
GGAGAAGTGG GCTTCCGTGC CTTCTCTGGT TCTGGGAATA GACTGGATGG AAAGAAAAAG 
GGGGTTGAAC CCAGTCCCTC CCCAATCAAG CCTGGAGACA TTAAAAGAGG AATTCCTAAT 
TACGAATTTA AGCTTGGTAA GATCACTTTC ATCAGAAATT CACGTCCAAT GGTCAAAAAG 
GTTGAAGAGG ATGAAGCTGG AGGCAGATTC GTTGCTTTCT CTGGAGAAGG ACAGTCGCTG 
CGGAAGAAGG GAAGAAAGCC CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_445870.1
CDS	96..1019
Translation	MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPMVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP

Target ORF information:

RefSeq Version	NM_053418.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ubiquitin recognition factor in ER associated degradation 1 (Ufd1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_053418.2

ORF Insert Sequence:

ATGTTTTCTT TCAACATGTT TGACCACCCG ATTCCCCGGG TCTTCCAGAA CCGCTTCTCC 
ACGCAGTACC GCTGCTTCTC TGTATCCATG CTAGCAGGGC CTAATGACAG GTCAGATGTG 
GAGAAAGGAG GGAAGATAAT TATGCCACCC TCAGCCCTCG ATCAACTCAG CCGGCTCAAC 
ATTACCTATC CTATGCTGTT TAAATTGACC AATAAGAATT CAGACCGAAT GACACACTGT 
GGTGTACTGG AGTTTGTTGC TGATGAAGGC ATCTGTTACC TCCCCCACTG GATGATGCAG 
AATTTGCTGT TGGAAGAAGG GGGCCTGGTT CAGGTGGAAA GTGTCAACCT TCAGGTGGCT 
ACTTACTCTA AGTTCCAGCC TCAGAGCCCA GACTTCCTGG ATATCACCAA CCCCAAAGCA 
GTATTAGAAA ATGCACTGAG GAACTTCGCC TGTCTGACGA CTGGAGATGT GATCGCTATC 
AACTACAATG AGAAGATCTA TGAACTGCGG GTGATGGAGA CCAAACCGGA CAAGGCCGTA 
TCCATTATTG AATGTGACAT GAATGTGGAT TTTGATGCTC CCTTGGGCTA CAAAGAACCA 
GAAAGACCAG TACAGCATGA GGAGTCAATA GAGGGAGAAG CTGACCACAG TGGCTATGCT 
GGAGAAGTGG GCTTCCGTGC CTTCTCTGGT TCTGGGAATA GACTGGATGG AAAGAAAAAG 
GGGGTTGAAC CCAGTCCCTC CCCAATCAAG CCTGGAGACA TTAAAAGAGG AATTCCTAAT 
TACGAATTTA AGCTTGGTAA GATCACTTTC ATCAGAAATT CACGTCCAAT GGTCAAAAAG 
GTTGAAGAGG ATGAAGCTGG AGGCAGATTC GTTGCTTTCT CTGGAGAAGG ACAGTCGCTG 
CGGAAGAAGG GAAGAAAGCC CTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ufd1l ( XM_008768904.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008767126.1 Rattus norvegicus ubiquitin fusion degradation 1 like (yeast) (Ufd1l), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa34469
Clone ID Related Accession (Same CDS sequence)	XM_008768904.2
Accession Version	XM_008768904.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 795bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	ubiquitin fusion degradation protein 1 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005110.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008768904.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGACAGTAA TTATGCCACC CTCAGCCCTC GATCAACTCA GCCGGCTCAA CATTACCTAT 
CCTATGCTGT TTAAATTGAC CAATAAGAAT TCAGACCGAA TGACACACTG TGGTGTACTG 
GAGTTTGTTG CTGATGAAGG CATCTGTTAC CTCCCCCACT GGATGATGCA GAATTTGCTG 
TTGGAAGAAG GGGGCCTGGT TCAGGTGGAA AGTGTCAACC TTCAGGTGGC TACTTACTCT 
AAGTTCCAGC CTCAGAGCCC AGACTTCCTG GATATCACCA ACCCCAAAGC AGTATTAGAA 
AATGCACTGA GGAACTTCGC CTGTCTGACG ACTGGAGATG TGATCGCTAT CAACTACAAT 
GAGAAGATCT ATGAACTGCG GGTGATGGAG ACCAAACCGG ACAAGGCCGT ATCCATTATT 
GAATGTGACA TGAATGTGGA TTTTGATGCT CCCTTGGGCT ACAAAGAACC AGAAAGACCA 
GTACAGCATG AGGAGTCAAT AGAGGGAGAA GCTGACCACA GTGGCTATGC TGGAGAAGTG 
GGCTTCCGTG CCTTCTCTGG TTCTGGGAAT AGACTGGATG GAAAGAAAAA GGGGGTTGAA 
CCCAGTCCCT CCCCAATCAA GCCTGGAGAC ATTAAAAGAG GAATTCCTAA TTACGAATTT 
AAGCTTGGTA AGATCACTTT CATCAGAAAT TCACGTCCAA TGGTCAAAAA GGTTGAAGAG 
GATGAAGCTG GAGGCAGATT CGTTGCTTTC TCTGGAGAAG GACAGTCGCT GCGGAAGAAG 
GGAAGAAAGC CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008767126.1
CDS	237..1031
Translation	MTVIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERPVQHEESIEGEADHSGYAGEVGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIKRGIPNYEFKLGKITFIRNSRPMVKKVEEDEAGGRFVAFSGEGQSLRKKGRKP

Target ORF information:

RefSeq Version	XM_008768904.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus ubiquitin fusion degradation 1 like (yeast) (Ufd1l), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008768904.2

ORF Insert Sequence:

ATGACAGTAA TTATGCCACC CTCAGCCCTC GATCAACTCA GCCGGCTCAA CATTACCTAT 
CCTATGCTGT TTAAATTGAC CAATAAGAAT TCAGACCGAA TGACACACTG TGGTGTACTG 
GAGTTTGTTG CTGATGAAGG CATCTGTTAC CTCCCCCACT GGATGATGCA GAATTTGCTG 
TTGGAAGAAG GGGGCCTGGT TCAGGTGGAA AGTGTCAACC TTCAGGTGGC TACTTACTCT 
AAGTTCCAGC CTCAGAGCCC AGACTTCCTG GATATCACCA ACCCCAAAGC AGTATTAGAA 
AATGCACTGA GGAACTTCGC CTGTCTGACG ACTGGAGATG TGATCGCTAT CAACTACAAT 
GAGAAGATCT ATGAACTGCG GGTGATGGAG ACCAAACCGG ACAAGGCCGT ATCCATTATT 
GAATGTGACA TGAATGTGGA TTTTGATGCT CCCTTGGGCT ACAAAGAACC AGAAAGACCA 
GTACAGCATG AGGAGTCAAT AGAGGGAGAA GCTGACCACA GTGGCTATGC TGGAGAAGTG 
GGCTTCCGTG CCTTCTCTGG TTCTGGGAAT AGACTGGATG GAAAGAAAAA GGGGGTTGAA 
CCCAGTCCCT CCCCAATCAA GCCTGGAGAC ATTAAAAGAG GAATTCCTAA TTACGAATTT 
AAGCTTGGTA AGATCACTTT CATCAGAAAT TCACGTCCAA TGGTCAAAAA GGTTGAAGAG 
GATGAAGCTG GAGGCAGATT CGTTGCTTTC TCTGGAGAAG GACAGTCGCT GCGGAAGAAG 
GGAAGAAAGC CCTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A non-canonical role of the p97 complex in RIG-I antiviral signaling.
The EMBO journal34(23)2903-20(2015 Dec)
Hao Q,Jiao S,Shi Z,Li C,Meng X,Zhang Z,Wang Y,Song X,Wang W,Zhang R,Zhao Y,Wong CC,Zhou Z

Identification of ERAD components essential for dislocation of the null Hong Kong variant of α-1-antitrypsin (NHK).
Biochemical and biophysical research communications458(2)424-8(2015 Mar)
Zhong Y,Shen H,Wang Y,Yang Y,Yang P,Fang S

Caveolin-1 interacts with Derlin-1 and promotes ubiquitination and degradation of cyclooxygenase-2 via collaboration with p97 complex.
The Journal of biological chemistry288(46)33462-9(2013 Nov)
Chen SF,Wu CH,Lee YM,Tam K,Tsai YC,Liou JY,Shyue SK

Proteomic characterization of the human sperm nucleus.
Proteomics11(13)2714-26(2011 Jul)
de Mateo S,Castillo J,Estanyol JM,Ballescà JL,Oliva R

Mitochondrial localization and function of a subset of 22q11 deletion syndrome candidate genes.
Molecular and cellular neurosciences39(3)439-51(2008 Nov)
Maynard TM,Meechan DW,Dudevoir ML,Gopalakrishna D,Peters AZ,Heindel CC,Sugimoto TJ,Wu Y,Lieberman JA,Lamantia AS

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Ufd1l cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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